Tlin009886.2
Basic Information
- Insect
- Thymelicus lineola
- Gene Symbol
- GATA-B
- Assembly
- GCA_963932265.1
- Location
- OZ010685.1:19622410-19625188[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-18 7.5e-15 55.2 3.7 1 34 58 90 58 92 0.97 2 2 3.7e-18 1.6e-14 54.1 6.8 1 34 111 143 111 145 0.97
Sequence Information
- Coding Sequence
- ATGGTTTTCTGCGATCGACACGATGAGGACGGGTGTCACGTAGCGTCACCCAGTGATAGACGATGTTTCCATATCGGACGCTCGGCGGGACTCGGTGGCACTCGAGGCAGGTGCGAGCTAACGTTGTGTTGCGCAGTCGAGATGGCGGAGTTTTTCACGGGGGGCCGCGAGTGCGTCAACTGCGGCGCGATCCAGACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCGCGGCGGCTGATGGGCACGAAGCGGCCCGGCATGATGTGCAACAACTGCAAGACCACCACCACGTCGCTGTGGCGGCGCAACGCGCAGGGCGAGACCGTGTGCAACGCGTGCGGCCTCTACTTCAAGCTGCACAACATCAACCGCCCCATCGCCATGAAGAAGGACTCCATCCAGACGAGAAAGCGGAAACCAAAGAACACCATGAAGGGCGAGCGCAGCCTCAGCAAGAGCTCGCACGCGACGCACGCGACGCATGCGACGCACTCCGCGCACATCGGCCACGCCACGCACTCCGTACCCAACTCCGTCAAGTCGGAGAACTTACTAGACAGCGGCGCGCGCTCCCCGCTGGCCATGGGCTACTTCGTGCAGCCGCACGTCAAGCTGGAGGAGCCGCCGCCGGCGCACTCGCAGCATCAGCAGCACCAGCAGCACCACCATCACCAGcaacagcagcagcagcagcagcaccAGCAGCAGCATCAGCTGTACGACGAGCCCGAGTACCGCGAGCGGCCCACCGTGGTGTCGCTCGGCAGCTGA
- Protein Sequence
- MVFCDRHDEDGCHVASPSDRRCFHIGRSAGLGGTRGRCELTLCCAVEMAEFFTGGRECVNCGAIQTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLMGTKRPGMMCNNCKTTTTSLWRRNAQGETVCNACGLYFKLHNINRPIAMKKDSIQTRKRKPKNTMKGERSLSKSSHATHATHATHSAHIGHATHSVPNSVKSENLLDSGARSPLAMGYFVQPHVKLEEPPPAHSQHQQHQQHHHHQQQQQQQQHQQQHQLYDEPEYRERPTVVSLGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00970901; iTF_00971851;
- 90% Identity
- -
- 80% Identity
- -