Murs017879.1
Basic Information
- Insect
- Megathymus ursus
- Gene Symbol
- GATA-B
- Assembly
- GCA_003671415.1
- Location
- PDGT01000084.1:74501-77439[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-18 3.8e-15 55.5 3.7 1 34 11 43 11 45 0.97 2 2 2.6e-18 8.4e-15 54.4 6.8 1 34 64 96 64 98 0.97
Sequence Information
- Coding Sequence
- ATGGCGGAGTTTTTCACGGGGGGCCGTGAGTGCGTCAACTGCGGTGCAATCCAGACGCCGCTGTGGCGGCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAATGGCATGAACCGGCCGCTGAAGCAGCCGCGGCGGCTGATGGGTACTAAGCGGCCGGGCATGATGTGCAACAACTGCAAAACCACCACCACGTCGCTGTGGCGACGCAACGCGCAGGGCGAGACGGTGTGCAACGCTTGTGGGCTGTACTTCAAGCTGCACAACATCAACCGGCCCATCGCCATGAAGAAGGACTCCATACAGACGAGGAAGCGGAAACCAAAGAACACCATGAAGGGGGAACGTAACCTCAGTAAGAGCTCGCACCCGACTCACGCCGCCCACGCCGCCCACTCGGCGCACTCCAGCCAGATCACCCACTCGCCGCACTCCGTAACCAACTCCGTCAAGTCGGAGAACTTACTAGACGGCGGAGTGGGGGCGGGCCCCGGCGCGAGCGGCACGCGATCTCCGCTGTCGATGGGCTACTTCGTGCAGCAGCATGTGAAGCTGGAGGAGCCGCCACCGGCGCACTCGCAGCAGCTGCAGCACCAGCAACACCCGCAGCACCAGCAACACCAGCAACACCCGCTGTACGACGAGCCCGAGTACCGCGAGCGGCCCACCGTCGTGTCTCTGGGCAGCTGA
- Protein Sequence
- MAEFFTGGRECVNCGAIQTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLMGTKRPGMMCNNCKTTTTSLWRRNAQGETVCNACGLYFKLHNINRPIAMKKDSIQTRKRKPKNTMKGERNLSKSSHPTHAAHAAHSAHSSQITHSPHSVTNSVKSENLLDGGVGAGPGASGTRSPLSMGYFVQQHVKLEEPPPAHSQQLQHQQHPQHQQHQQHPLYDEPEYRERPTVVSLGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01439560;
- 90% Identity
- iTF_00971851;
- 80% Identity
- iTF_00971851;