Basic Information

Insect: Thymelicus lineola
Gene Symbol: -
Assembly: GCA_963932265.1
Location: OZ010685.1:16607580-16619640[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 3.1e-06 0.00029 22.0 2.7 1 23 199 221 199 221 0.98

2 27 0.0018 0.17 13.3 0.7 2 20 253 271 252 273 0.93

3 27 0.00021 0.019 16.3 0.1 2 23 298 320 297 320 0.96

4 27 1.9 1.8e+02 3.8 0.9 2 19 345 362 344 364 0.83

5 27 0.012 1.1 10.8 0.9 1 23 375 397 375 397 0.96

6 27 0.094 8.9 7.9 0.2 1 23 415 437 415 437 0.93

7 27 0.00026 0.025 16.0 0.8 2 23 475 496 474 496 0.96

8 27 0.00022 0.021 16.2 2.0 2 23 539 561 539 561 0.97

9 27 0.0022 0.21 13.1 1.0 1 23 611 634 611 634 0.96

10 27 0.0046 0.44 12.0 0.1 1 23 689 711 689 711 0.97

11 27 0.044 4.1 9.0 9.2 1 23 722 744 722 744 0.99

12 27 0.095 8.9 7.9 1.8 2 23 756 777 755 777 0.96

13 27 0.0056 0.53 11.8 0.7 1 23 787 809 787 809 0.98

14 27 0.023 2.1 9.9 6.9 1 23 838 860 838 860 0.96

15 27 0.00051 0.048 15.1 4.3 1 23 871 893 871 893 0.98

16 27 6.6e-05 0.0062 17.9 0.9 1 23 901 923 901 923 0.97

17 27 0.0033 0.31 12.5 0.1 2 23 943 965 942 965 0.97

18 27 0.13 13 7.4 3.5 1 23 1012 1034 1012 1034 0.97

19 27 0.012 1.1 10.8 6.9 2 23 1045 1067 1044 1067 0.94

20 27 0.0027 0.25 12.8 0.3 1 23 1089 1111 1089 1111 0.97

21 27 0.032 3.1 9.4 1.9 2 23 1192 1213 1191 1213 0.94

22 27 0.43 41 5.8 4.0 5 23 1223 1241 1220 1241 0.94

23 27 0.0083 0.79 11.2 1.0 2 23 1252 1274 1251 1274 0.95

24 27 0.49 46 5.7 2.6 2 23 1291 1309 1291 1309 0.89

25 27 0.14 14 7.3 0.5 2 23 1384 1405 1383 1405 0.93

26 27 0.0084 0.79 11.2 0.3 2 23 1416 1438 1415 1438 0.95

27 27 4.7 4.4e+02 2.6 5.2 2 20 1476 1494 1475 1496 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	3.1e-06	0.00029	22.0	2.7	1	23	199	221	199	221	0.98
2	27	0.0018	0.17	13.3	0.7	2	20	253	271	252	273	0.93
3	27	0.00021	0.019	16.3	0.1	2	23	298	320	297	320	0.96
4	27	1.9	1.8e+02	3.8	0.9	2	19	345	362	344	364	0.83
5	27	0.012	1.1	10.8	0.9	1	23	375	397	375	397	0.96
6	27	0.094	8.9	7.9	0.2	1	23	415	437	415	437	0.93
7	27	0.00026	0.025	16.0	0.8	2	23	475	496	474	496	0.96
8	27	0.00022	0.021	16.2	2.0	2	23	539	561	539	561	0.97
9	27	0.0022	0.21	13.1	1.0	1	23	611	634	611	634	0.96
10	27	0.0046	0.44	12.0	0.1	1	23	689	711	689	711	0.97
11	27	0.044	4.1	9.0	9.2	1	23	722	744	722	744	0.99
12	27	0.095	8.9	7.9	1.8	2	23	756	777	755	777	0.96
13	27	0.0056	0.53	11.8	0.7	1	23	787	809	787	809	0.98
14	27	0.023	2.1	9.9	6.9	1	23	838	860	838	860	0.96
15	27	0.00051	0.048	15.1	4.3	1	23	871	893	871	893	0.98
16	27	6.6e-05	0.0062	17.9	0.9	1	23	901	923	901	923	0.97
17	27	0.0033	0.31	12.5	0.1	2	23	943	965	942	965	0.97
18	27	0.13	13	7.4	3.5	1	23	1012	1034	1012	1034	0.97
19	27	0.012	1.1	10.8	6.9	2	23	1045	1067	1044	1067	0.94
20	27	0.0027	0.25	12.8	0.3	1	23	1089	1111	1089	1111	0.97
21	27	0.032	3.1	9.4	1.9	2	23	1192	1213	1191	1213	0.94
22	27	0.43	41	5.8	4.0	5	23	1223	1241	1220	1241	0.94
23	27	0.0083	0.79	11.2	1.0	2	23	1252	1274	1251	1274	0.95
24	27	0.49	46	5.7	2.6	2	23	1291	1309	1291	1309	0.89
25	27	0.14	14	7.3	0.5	2	23	1384	1405	1383	1405	0.93
26	27	0.0084	0.79	11.2	0.3	2	23	1416	1438	1415	1438	0.95
27	27	4.7	4.4e+02	2.6	5.2	2	20	1476	1494	1475	1496	0.92

Sequence Information

Coding Sequence: ATGGCACTCAAGCTGGGAAAATGCAGGCTCTGCCTCAAGCTTGGCGACTTCTACTCCATCTTCACGATGGACAACAATTTGCAGCTCGCCGAAATGGTTATGGAGTGCACAAAAGTGAAAATTTACGAAGGCGATGGGCTCCCAGATAAAATCTGCTCAGAATGTATCCAAAAGCTGAGCAGCGCACACATTTTCAAACAACAATGTGAACGGGCGGATGAAGAGCTGCGTCGGAACTATGTTCCACCGCCTGGATTCAGTATTTCTCCACCACCAGCTGCAAACAGGCAAAGCAGCGATTCGGCTTTTTCTAACAATACTGATGTATCTAATAAGCCTTCACCGTCAACTGAAACGGTACCAACACCTATCAGCCGTAATAGGAAAAGAAGCCACGAAAGCTTAGACAATGCTTCTACGAGCAGCCAATCTCACGACAACCGACCGGGCCCTACTAAGCGTGTTCAGGAACTCAGAAATACGCCAAAGAATCAAAAGAAACAGAAGACTACGAGTTACTATACAGATTCTGATTACGAATACAACAGCCCATCACAATTCTCTGTCGAAACGGACTCCGATGACTTCCTGGAGCACAGGTGCAAGGAATGTGACAAACGCTTTGATTCCAGCAGAGGCTTAATAAATCACATGAGAATGCACGAACGATCAGCGAAAGAGGAAACTTTGaacgaaaatgaaattactAGTACTCCGAAAACTTCTGAGGACGCCACCGATGCAGATGATAAGCTGAGTTGCGACAGATGTGGGAAAACATTCAAGTTAAAGATAATGTTGAAGCGACACCACGACATTTGCGTCACACCACCCTTGAAGGAACTAAAAGTGGCTCTCGAACCGATAGACGGGAAGGTGGGCTCGAAGATTGAATGCGAAATATGTAACGCGAAATTTAAGTCTGTAGATAACCTCGATAAGCATTTGCGAGTGGTTCACGCTGCTGCGCCTAAGAAGGAAAAAGCTCCTATGCCTCAAACACCACAACCAGAAAacggtaaaataattttaccgtGCATGTACTGCAATAAGAAGTATTCCGATTACTATTCCCACAACGCTCATTTTAACGCATGCTGCAAAGGAAAGTATACTGGCTGCTTCGATTGTCCATTGTGTCACAAAATGGTGGTTAAAAAAGCATCTTATTTCCTTCATATTAAGGCGCATTTTATGCAAACAATTCCGACAACTCCAGGGTCAGCGGAATCTCGTAAACGGCACGACTGTCGGATTTGCAAAAAGAAATTACCTTCTGAAGAAGAACTGGTGACTCATTTAGCAGCTCACATGTCTAATATGGAAAATCCTGATGATGAAGGATCAAGGGCAAGTACACTCGATGATTCAGCATCTATACAATCAGAATACAGTAGCTCTAAAATTACAACTGGGCCGTTGAGTTGTAGAATTTGTGACAAGAAATTCACTTACAAGAAAGCTTTAGACTCACATATtgcaaaacattcacaatcaGAGATAAATGTTAAAACAGAACCTCCAGACAAAAGCTTTAATGATTCAACAGAACTGTTGACCGAAGCCGCACAACAATCAGAATCAGAATCTAGTCAAGATGAGGGCGATGATAATACGTGCGACATTTGCGAGAAACAGTTCTCCTACAAGAGGCTTCTGATACAGCACAAGAGAACGAAGCATCCGATGACGGCGGGAACGAAACGGGCTAAAGTCAACCTCAAGGACTGTTCCGTTCGCTGCCTCATCTGCGACATCGAGATGAAAGTGAGCGCGATAAACGAGCACAATCAAACTCACATCTCGGTGAATATAAAGCCGAGGAACCTCTACACTTGCATAATTTGTGAGGAGAAGTTCAAGAGTTGCAGTACGTTAGCGAATCATATAAAGATAGTGCACCGGTTGAAGCAACAGTCGTCGAAGCGGGAGACGGTTGCGCCGGACCTGGCGGATTTTTGTGAAGTCGTTGTGACGAAGGCGGAACCCCTGGACGTGCTCCAGAGTCACAACGGCTTTGGTGAGGTTTCCGCCCAAGGAGGGCCGCTAGTCAATCTCAGCGGCTTCACTTGTCCCATTTGCAACAAGCAGATGCCTACTTTGATTTCGCTTAACAGACACGTTAACTGGCACACTAATGTCGGCAACAATATCGAGAAAAAATACGAGTGTTTTGTTTGTCAAGAGACATTCCGGTTCCATTGCCACTACAAAATGCACATGCGAATCCACTACCATGACACCAATCTGGATCCGAAGTTTCTAACTTGTTCCATCTGCAATCGCAAGAGCAAACACTTGCGGGCCGCGCAGGCTCACATGAATTTCCACAAGCAGACTCGCTTCAAGACAAAAGACTACGAGTGTTCCATCTGCAAGAGAGTCTTCCAGTATCGGAAGGTGTATCTCTCTCACATGGCGATACATTACAAGCGAGGCGATAGCGCGAACAACACCATCGTCGGCTCCCAGCTTCCCACGTCAGCAGACAAAACAATATTCGACGGGACTCACACTTGCCACATATGCAGGAAAGTCTGTGACTCGGAGACATCTCTCAAGCACCATATCATCTGGCACAACTCCAAAACTTCCTTGTACGGCAATCGGCACACATGCCACATATGCGACCTGCAGTTCACTAATAAGAAACGATTGGAGCTTCACATCAGACTTCATTATGAAGATGAGAATGGTCCTTTCAAGTGCACGATATGCGGCAAGGGCTACACGGATGAGGAATTTTTCAAACGGCACGTGAAAGGCCACAACTTTGACCATCAGTCTCATAAGAAGCGTATCGAGAAATTGAGGAAAGATAAGGTGAAATGTCCGATATGTGCACGGTACTATCCGGATCTTGTCAAGCTTATTAGACATTTAAGACGAACGCATCCGGAGAGCAAGATGATCAAGGAGGACCCAGACGCTCCGCCTCCGAGTTACTTCTCGTGCAAGTTGTGCGCTAAGGTGTTCCTCGACGAACGACGATTGCAATTCCACGAGGAAGCTCATCTGAGGAAGCCGGAGTTTTTCAAATGTAAATTCTGCGGCAAGAAAACGATTTCGCTGAGAAATCACAGAGTTCATATCAAGGGACATTTGGCACAGAAATTTTTGGACAACCCGCTCAGCTGTCCCCATTGCGATCAGAAATTTACTAAAGGGTACCATCTCCATCATCACCTTCGCGATGCCCACAATATTAACGAGACTTGGATCGCGGAGCGCACCTCTCAAACGTTAAATGGCCCCTTGAAGGAATTCCAGTGCTCCGTATGCCTTAAAATATTAGCCAGCAAGGGCAACTTTGAGAGGCACATAGATTACCACAACTCGTTGAGATGCAACTACTGCTTCGATTACTTCAGCTCGTTGCGATTTTTAGAAGGTCATTTACAATTCAGTTGCGATAAGAAAAAGCTAATAGGAGATACAGAAATCTATCCCCGAAGGATAAAGTGTCAAGTTTGCTACAAGGCATTCCATTTGCAGGTGAAATTGGATTGCCATTTACGAACGCAGCACGGGATCAAGGTGTTCAAGGAAGCCTCCGAGGGCAAGAAGGATTGTGTATGCGATTACTGTTtcaaattattcgaaaatgagtATGCACTGAACAATCATAAGATTTATCATCGTACGGTAGGATACTACGGGTGCATCTACTGCGACCGGAAGTTTAGCACCATGACAACGTATCGGAAACATAAAAATCACCACTTTTCGCAACTGAACGTCGACAATCCAACAAAGTGCGAGCATTGCGATGAAACCTTTGTAGCTTTCAGAGAGTTCATATATCACATGAGGGACGTGCACGGAGACGACAAGGAATGGATCGTTTTGCCTAAGGAGTCCATCGAAGAAAAATGCCCCATTTGCAACAAAATATTCTTCAACCTCCATAGGCATCTCGACTACCACGAAGAAAACAAGTGTAAAAAATGTAACGAGTACTTCTTGTCTCACTTAGACTATGATAACCACTTGTGCGCCATCGACTCCGATGACGAGGAAGCTATGACCATCTGCGCCGAGAATGGAAATATACCCAAGTACGAAGAGTGTCGATTCTGCTTCAAGCCCATAACTAGAACCAGTTCCAAGCTCAAACACGATCAAATTCACAAGAGCTCCGGGTCTATTTCCTGTCGGTTTTGTGATCTGAAGTTTAAAACTATAGACGCGTTTAATATTCACGCATTCTCGCACCGGAGCAGAAAATATAACAAGAAGCCGATAAAGTGCCGACTTTGTGGAGAGAagtttgttaaatatggacCATTTATGAAACATATGAAAGCCGTTCATAAGAACATGAAGAAGTTGCATTATCGGGCAGTGGTCAAGGAGGAGGAGTGTGTAGTTTGCGGCGACTTCTTCCCGAACCTGCACAATCATTACCGCGCGCACTTGCAGAACCAGTGCCAAATGTGCCACAAGTACTTCACGTCCTTCAAGGTGTTCTCCAAACACACGTGCGATAAGGAAGACTCCGATCCCACCAAAGTGTTCACCAGTGAAGTAGACCTGCCCACGCTCATCAACACCTATGTTCCCAAAGATGAGAAAGATGACGAGAAATATTATGGATACACCGATGATGAGGAGGAGGAGGAAGCGGAGGCTGAAACAGAGATGCCAGATGAGGAACCAGAGCTCAAGGTCCGGGAGAGCAAGCCGATGCTGTTCGATGAGAACAGTCAAATAACATTGGACGATGAAAGTCAAAATTCTGTGGACGAGGAAGAGAGTAACATGCATTCGATGGTGCACGCCCCGATTATATCGGATGTGCTATCTCTTTATCAAAAGAAGGAAGATGTAGGAAACGTCGAGCAGGACAATGACGATGACATAGTTAATCTGATCGACGAGGATTCAGTGGGATTCGAAGAAAACGTTGTGACGGTTATTACAATCGAAGATTGA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTMDNNLQLAEMVMECTKVKIYEGDGLPDKICSECIQKLSSAHIFKQQCERADEELRRNYVPPPGFSISPPPAANRQSSDSAFSNNTDVSNKPSPSTETVPTPISRNRKRSHESLDNASTSSQSHDNRPGPTKRVQELRNTPKNQKKQKTTSYYTDSDYEYNSPSQFSVETDSDDFLEHRCKECDKRFDSSRGLINHMRMHERSAKEETLNENEITSTPKTSEDATDADDKLSCDRCGKTFKLKIMLKRHHDICVTPPLKELKVALEPIDGKVGSKIECEICNAKFKSVDNLDKHLRVVHAAAPKKEKAPMPQTPQPENGKIILPCMYCNKKYSDYYSHNAHFNACCKGKYTGCFDCPLCHKMVVKKASYFLHIKAHFMQTIPTTPGSAESRKRHDCRICKKKLPSEEELVTHLAAHMSNMENPDDEGSRASTLDDSASIQSEYSSSKITTGPLSCRICDKKFTYKKALDSHIAKHSQSEINVKTEPPDKSFNDSTELLTEAAQQSESESSQDEGDDNTCDICEKQFSYKRLLIQHKRTKHPMTAGTKRAKVNLKDCSVRCLICDIEMKVSAINEHNQTHISVNIKPRNLYTCIICEEKFKSCSTLANHIKIVHRLKQQSSKRETVAPDLADFCEVVVTKAEPLDVLQSHNGFGEVSAQGGPLVNLSGFTCPICNKQMPTLISLNRHVNWHTNVGNNIEKKYECFVCQETFRFHCHYKMHMRIHYHDTNLDPKFLTCSICNRKSKHLRAAQAHMNFHKQTRFKTKDYECSICKRVFQYRKVYLSHMAIHYKRGDSANNTIVGSQLPTSADKTIFDGTHTCHICRKVCDSETSLKHHIIWHNSKTSLYGNRHTCHICDLQFTNKKRLELHIRLHYEDENGPFKCTICGKGYTDEEFFKRHVKGHNFDHQSHKKRIEKLRKDKVKCPICARYYPDLVKLIRHLRRTHPESKMIKEDPDAPPPSYFSCKLCAKVFLDERRLQFHEEAHLRKPEFFKCKFCGKKTISLRNHRVHIKGHLAQKFLDNPLSCPHCDQKFTKGYHLHHHLRDAHNINETWIAERTSQTLNGPLKEFQCSVCLKILASKGNFERHIDYHNSLRCNYCFDYFSSLRFLEGHLQFSCDKKKLIGDTEIYPRRIKCQVCYKAFHLQVKLDCHLRTQHGIKVFKEASEGKKDCVCDYCFKLFENEYALNNHKIYHRTVGYYGCIYCDRKFSTMTTYRKHKNHHFSQLNVDNPTKCEHCDETFVAFREFIYHMRDVHGDDKEWIVLPKESIEEKCPICNKIFFNLHRHLDYHEENKCKKCNEYFLSHLDYDNHLCAIDSDDEEAMTICAENGNIPKYEECRFCFKPITRTSSKLKHDQIHKSSGSISCRFCDLKFKTIDAFNIHAFSHRSRKYNKKPIKCRLCGEKFVKYGPFMKHMKAVHKNMKKLHYRAVVKEEECVVCGDFFPNLHNHYRAHLQNQCQMCHKYFTSFKVFSKHTCDKEDSDPTKVFTSEVDLPTLINTYVPKDEKDDEKYYGYTDDEEEEEAEAETEMPDEEPELKVRESKPMLFDENSQITLDDESQNSVDEEESNMHSMVHAPIISDVLSLYQKKEDVGNVEQDNDDDIVNLIDEDSVGFEENVVTVITIED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00795889;
90% Identity: -
80% Identity: -