Tlin025487.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Thymelicus lineola
Gene Symbol
sip1
Assembly
GCA_963932265.1
Location
OZ010701.1:10654285-10670293[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.6e-58 1.3e-53 183.3 6.4 6 275 374 625 369 625 0.96

Sequence Information

Coding Sequence
ATGTCTGATGACGAAGTGATACGGTTTGAAGTAACGGATTATGATTTGGACAATGAATTCAATCCGAATAGAGGCCGCCGACCGAAGAAAGAACAACAAATATATGGCATATGGTCAAAAGACAGTGATGATGAAGAAAACGAAGACAATGTTATGCAAAGAACTCGAAAGCCTAAAGACTTCTCGGCGCCCATCGGCTTCATTGCTGGTGGTGTGCAGCAGGCCGGcaagaagaaagagaaaaaggATTTAGAACCATCAGAGGCATCAACATCTAGACCGACTCTAGCGCCCAAGTACAGCGACAGTTCAGATGAGGAAGCCCCTGTGCCAGAAGAGAAGGACACGGCAGGGATACGGCGTCAGGGGCAGGGGCTTAAGTCTAGCTCCCTGGGGGGGAATGTTGGGGCTTGGGAGAGGCACACTAAGGGGATTGGGGCTAAGTTGCTATTGCAGATGGGTTACCAACCTGGAAAAGGTCTCGGCAAAGACCTGCAGGGTATATCAGCACCGGTGGAGGCCACAGTTAGGAAAGGAAGGGGGGCTATTGGTGCTTATGGACCAGAGAAAGCGGCTcaaaaagcaaagaaagaagaagaacgCCGTCTGAAAGAGAAAGAGGATGGGGAGAAAGAGAAAGGGAAGGGTGAGAAGGCGTATAACTGGAAGAAGTCTCATAAAGGACGATACTTCTATAAAGAAGCCGCTGATGTCATACAGGAGGGTAAACCCACCTTGCATACTATTAGCAGTAGTGAGCTGTCTCGTGTGCCGGTGATCGATATGACGGGGAGGTCAGCGCGCGTGCTGAGCGGGTACCACGCGctgcgcgccgccgcgccgcgatTCGAGCACGAGCCGAGACGCGCGTTGACTAGCTTCGCAGCGCCTGCCTTGACTAGGAACTTGGAGCTTATTGTGCATTGTTGTGAACAGGACATAATCCAAAACGCCCGGGAACTCCAAACCGCCGAAGATGAGATAGTGGCGCTAGAGCGGGACTTGGAAGAATGCAGCACCAAGCTGCGAGAGCAGGACACCGTTATGCACAAAGTAGAGGCTATCCTGCTCAAGGTTGAGGAACTGAACCGGCCGGAGTTGTCGTTGGAGGACGCGTTTGATGTGTTGTCGGACTTGAAGGAGACCCACCCACTAGAATACGAGATGTTTGGCCTGGGGTCCATAGGAGGCAACATAATTAGCCCCCTGCTGAGCGCGATGTTCGCCAAGTGGGACCCCCTGCTGGCCCCCAGGGACCCCATACCGACCTTCGTCAAGTGGAGAACGATACTGACAGACGAGGCGTACAACAGTTTGTTGTGGCAACACTTTCTACCCGCTGTTACTACTGCTGCTGAGGCCTGGAACCCTCGAGTACCAGAACCGATGCTAGCGATCTTCACCTCGTGGAGCGAGGTAGCCCCAGGCTGGGTGCTGGGGTCCGTAGCGTCTCGCACGTTGGCCCCCCGACTGTTGGCCGCCGTGCGCGCGTGGGACCCTACCGTGGACACCCAGCCGCTGCATCACTGGGTGTTGCCGTGGCATGAGCTCACTGGCAACGCCCTAAACACATCAGTATACCCGCTAATCCGGTCCCGCCTCGCCACGGCGTTGTCCGCGTGGCATCCCGCCGACGCGTCCGCCAAGCCCTTGCTCGCGGCCTGGCAGGAGGCCTGGGGGCCTGCCCTCGTGGCCTTGATACATCATCATGTGGTACCGAAGCTGGAGCACTGTCTCCAACATGCGCCGTTGGAGCTCGTCGGACGGGAGAATACGGCGTGGTTGTGGTGCGTGCAATGGATGGACCTAGTGGGCGTCGCCACGATCGCGGCGTTGGCGGCGCGCGCGCTCCTCCCGCGCTGGCTCGCGGCGCTCGCGGCCTGGCTCAACACCGCGCCGCCGCACGCCACCGTGCTGCGCTCGTATACCGACTTCAAGAAAATGTTCCCCGAAGAAGTGCTTAAAGAACCTGCTGTCCGGGATGCCTTCAGAAAAGCCCTGGACATGATGAACAGGAGCACAGACATCGACACAGTGGaacctccccctcccccccgtTTTACCCCAACAGAGCCAAAGGAAACTTCTAGAATATCAGATGTCCTTGCTTCCATCACTCAGCACAAGAGCTTCTCCGAGCTTCTAGAATCTAGATGCATTGAACGAGGGATTACTTTTGTCCCCATAGCAGGCAAGAGCAGAGAGGGAAGACCGTTGTACAAGATCGGTGAACTACAGTGCTATGTGATTCGGAACGTTATCATGTACTCGGATGATTCCGGAAGAACTTTCTCACCCATCGGGCTAGATAGGCTTTTGAGTCTTGTTGAGGAGTGA
Protein Sequence
MSDDEVIRFEVTDYDLDNEFNPNRGRRPKKEQQIYGIWSKDSDDEENEDNVMQRTRKPKDFSAPIGFIAGGVQQAGKKKEKKDLEPSEASTSRPTLAPKYSDSSDEEAPVPEEKDTAGIRRQGQGLKSSSLGGNVGAWERHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEATVRKGRGAIGAYGPEKAAQKAKKEEERRLKEKEDGEKEKGKGEKAYNWKKSHKGRYFYKEAADVIQEGKPTLHTISSSELSRVPVIDMTGRSARVLSGYHALRAAAPRFEHEPRRALTSFAAPALTRNLELIVHCCEQDIIQNARELQTAEDEIVALERDLEECSTKLREQDTVMHKVEAILLKVEELNRPELSLEDAFDVLSDLKETHPLEYEMFGLGSIGGNIISPLLSAMFAKWDPLLAPRDPIPTFVKWRTILTDEAYNSLLWQHFLPAVTTAAEAWNPRVPEPMLAIFTSWSEVAPGWVLGSVASRTLAPRLLAAVRAWDPTVDTQPLHHWVLPWHELTGNALNTSVYPLIRSRLATALSAWHPADASAKPLLAAWQEAWGPALVALIHHHVVPKLEHCLQHAPLELVGRENTAWLWCVQWMDLVGVATIAALAARALLPRWLAALAAWLNTAPPHATVLRSYTDFKKMFPEEVLKEPAVRDAFRKALDMMNRSTDIDTVEPPPPPRFTPTEPKETSRISDVLASITQHKSFSELLESRCIERGITFVPIAGKSREGRPLYKIGELQCYVIRNVIMYSDDSGRTFSPIGLDRLLSLVEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00288064;
90% Identity
iTF_00166933; iTF_00970424; iTF_00971387; iTF_00795723; iTF_01082456;
80% Identity
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