Basic Information

Insect: Thymelicus acteon
Gene Symbol: -
Assembly: GCA_951805285.1
Location: OX638228.1:12211729-12217894[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0006 0.057 14.8 0.4 1 23 300 323 300 323 0.95

2 12 0.091 8.6 7.9 1.7 1 19 339 357 339 361 0.92

3 12 3.6e-05 0.0034 18.7 3.8 2 23 367 388 366 388 0.97

4 12 0.00032 0.03 15.7 1.4 1 23 392 415 392 415 0.93

5 12 0.022 2 9.9 0.3 1 23 418 440 418 440 0.98

6 12 0.00014 0.013 16.8 0.4 2 23 523 544 523 544 0.96

7 12 0.33 31 6.2 0.2 3 23 565 586 564 586 0.95

8 12 1e-06 9.9e-05 23.5 4.1 1 23 592 614 592 614 0.98

9 12 0.00057 0.054 14.9 2.5 1 23 619 641 619 641 0.98

10 12 0.0095 0.89 11.0 5.4 2 21 648 667 647 670 0.94

11 12 0.85 80 4.9 2.8 1 19 678 696 678 701 0.87

12 12 0.036 3.4 9.2 1.8 3 19 710 726 709 731 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0006	0.057	14.8	0.4	1	23	300	323	300	323	0.95
2	12	0.091	8.6	7.9	1.7	1	19	339	357	339	361	0.92
3	12	3.6e-05	0.0034	18.7	3.8	2	23	367	388	366	388	0.97
4	12	0.00032	0.03	15.7	1.4	1	23	392	415	392	415	0.93
5	12	0.022	2	9.9	0.3	1	23	418	440	418	440	0.98
6	12	0.00014	0.013	16.8	0.4	2	23	523	544	523	544	0.96
7	12	0.33	31	6.2	0.2	3	23	565	586	564	586	0.95
8	12	1e-06	9.9e-05	23.5	4.1	1	23	592	614	592	614	0.98
9	12	0.00057	0.054	14.9	2.5	1	23	619	641	619	641	0.98
10	12	0.0095	0.89	11.0	5.4	2	21	648	667	647	670	0.94
11	12	0.85	80	4.9	2.8	1	19	678	696	678	701	0.87
12	12	0.036	3.4	9.2	1.8	3	19	710	726	709	731	0.89

Sequence Information

Coding Sequence: atggAGAGTGATGCCCTTACGTCGAGTACCGATGTCTTGTACCCAGTGCTTCTCATACCTAAAGCGTGCACCTCCTTGGAAACAAACTGTGACGCTTCTGATAACGTTTTTATTGATTTGACCATAACATCCCCAGACACCGAAGGAAATGAAGCTTGCATTTACTCTGGATTTTGCAATATCAAGCTAATAGACAGCTGTGATACATCAGATCAAGGGTTGAATGCTACCTCTACTGCTAGCAGAGACCAGATTTCAGTATTGGATACCGGGACAACATATCCTCCTTACAGCCAGTCCCAAGTGTGGATAGACCCGGCAAGAAGTCCATATGTCTATAACAGCTGTAACACAGCTGAGTCACAGGAACGGTACTCAGTCTACCATCAGTCTCAATCTAATCATATAACAGTGGAACATCACAACACATACATCACACAAAATGTGTACAACTGTAAGGATTCCATTCGTTATTCACCGGTTGATGAGTTTGAGCATAAAAAGTTCAGGAAGATTCAAAATGAATCAAGCAATCAGAACAGTTTGGCAGATCAAATTTTGTATGAAGATGATGAGTTTGAGTGCGGTGTCTTCCTTTCCAAGTTACCAGAGGAGATATGGAATGAGAATGAGACTCGGGCAAGAGAAGAGATGAAGTATGTGGGAATGCAGAGTGAGAATGATGCATTGAAACAACTCATGTCATCTGATATACAGTCTTTGTCCAAGCAACAGAAGACTATTCTCTTTCTGGGTCATGATTCACATTTTGGTCAAACTATTCAGAAAATTGCCATAAATGATCCTTATTTGGAATGTGCTCCTCTTGTTCCAGATGATGTTGATCATGAAGTTGTTATCgGTCAAACCAAAGCAACAAGACCCAACCAAAAGAAATACCAGTGCGACAAATGCAAGCAGATATTTGACCAAATAGCAGAGTTCAAGCAACACATGATCGGCAATCACAAGAGTCCGAAAATCCCTGCAATGGTCAGCCACAGCGAAGTCAAATTCATGTGTCTCGAATGCGGGAAGAACCTTAAAAACCAAGAGAAGTTTGAGATGCACTGCCTCGGACACGGCGACCCCGACTTAGAATGTAACAAGTGCCATAAAGTCTTCGCGTCGAAGTTCACGCTTCGCACCCACAGAAAGATCCATCAGAGAAAGCACCCTTGTAAGTACTGTTCGAAAACATTCTCCAGCTTCGAGGATTTGAAGGGTCATGCTGCAAAAATTCACTTCGTGTTCATGTGTCCTGTGTGTCCCTTTACAGCGGATACCTTCAACCTGCTGAGGGAGCATAGGAGCACCCATACTGAAGTAGTTCGAGATACGAGTGACACGGACTTCAACGTTTCAATAGGAGATGATTTCATCAGCGAAAGTGGCACCTTATCGCCTATCCCTGAACACTCCGAGCAAATAATTGAACATGATGACATTGGATTAGACAAACAGGATGAGATCGCGAGAGCAGACTCCATTATCGCTAAAGTCGTGTCCAACAAGATGTTTCTTCTGCACTCTAAAAAGTCCAAACGTGGCAAGAAGTTTAGAAACACTTGTGACGTTTGCTTGAAGACTTTCGATCGGGTATCGGATCTTAAACGTCATCTCATAGAGCACGTCATTCGTAGCACTCTCGCTAAGAATCCGGTCAACCCTCAAGGGGCACTAAACATACTCTGCGAGGTATGTCAGGTAGAGACCTTCACAAAGGTAGATAAATACAAAGCTCACTTACGCGAACACGCAAAACTGACCCTATACAAATGCACCTTCTGTGATAAATCCTTCAGCGATTCCAGCAATTTCTCCaagcacaaaaaaatacatGGCTCAACGTACTTCCAGTGCGACCTTTGTCAACGGAAATTCAACTCTAAGAAGATGATAACACAGCACATGGAGTATCACAATAAGAATGCGCCTATACAGTGCTACTATTGCCATAAAGTTTTCCATTTTGAATCGATgcttaataaacatattaaatgcGCACACACACGAGAGATCTTCTCTAGATTTCGTTGTAGATTTTGTCATAAATACTTCAAGAGTCTCAAGGAGAAATGGGACCATGAGTGGACCGTGCATAATGTTAGAAAAATGATTGTTGACTGCATGATTTGTGGTGCTAAATACAGAAAGTATTCGGAATTGAAACGCCATTGCAGTAGAGTCCATGAAATGGGCATACCTCCTGCAaagaatttattcaaaaaacGAAAATCTTCGTAA
Protein Sequence: MESDALTSSTDVLYPVLLIPKACTSLETNCDASDNVFIDLTITSPDTEGNEACIYSGFCNIKLIDSCDTSDQGLNATSTASRDQISVLDTGTTYPPYSQSQVWIDPARSPYVYNSCNTAESQERYSVYHQSQSNHITVEHHNTYITQNVYNCKDSIRYSPVDEFEHKKFRKIQNESSNQNSLADQILYEDDEFECGVFLSKLPEEIWNENETRAREEMKYVGMQSENDALKQLMSSDIQSLSKQQKTILFLGHDSHFGQTIQKIAINDPYLECAPLVPDDVDHEVVIGQTKATRPNQKKYQCDKCKQIFDQIAEFKQHMIGNHKSPKIPAMVSHSEVKFMCLECGKNLKNQEKFEMHCLGHGDPDLECNKCHKVFASKFTLRTHRKIHQRKHPCKYCSKTFSSFEDLKGHAAKIHFVFMCPVCPFTADTFNLLREHRSTHTEVVRDTSDTDFNVSIGDDFISESGTLSPIPEHSEQIIEHDDIGLDKQDEIARADSIIAKVVSNKMFLLHSKKSKRGKKFRNTCDVCLKTFDRVSDLKRHLIEHVIRSTLAKNPVNPQGALNILCEVCQVETFTKVDKYKAHLREHAKLTLYKCTFCDKSFSDSSNFSKHKKIHGSTYFQCDLCQRKFNSKKMITQHMEYHNKNAPIQCYYCHKVFHFESMLNKHIKCAHTREIFSRFRCRFCHKYFKSLKEKWDHEWTVHNVRKMIVDCMICGAKYRKYSELKRHCSRVHEMGIPPAKNLFKKRKSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01082774;
90% Identity: iTF_01439337;
80% Identity: -