Basic Information

Insect: Thymelicus acteon
Gene Symbol: -
Assembly: GCA_951805285.1
Location: OX638226.1:15292948-15301876[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.3 1.2e+02 4.3 0.4 3 23 113 133 111 133 0.95

2 18 0.027 2.5 9.6 0.1 2 23 137 159 136 159 0.94

3 18 0.15 14 7.3 0.5 3 23 387 408 385 408 0.95

4 18 0.0017 0.16 13.3 0.0 1 20 416 435 416 436 0.97

5 18 0.0033 0.31 12.5 0.2 2 23 447 468 446 468 0.93

6 18 0.64 60 5.3 0.7 1 23 484 507 484 507 0.91

7 18 0.014 1.3 10.5 2.2 1 23 516 539 516 539 0.94

8 18 4.9 4.7e+02 2.5 0.5 3 20 617 634 616 638 0.78

9 18 5.9 5.6e+02 2.2 1.6 1 23 643 666 643 666 0.91

10 18 0.00011 0.01 17.1 1.2 1 23 672 694 672 694 0.96

11 18 6e-06 0.00057 21.1 2.7 1 23 701 723 701 723 0.98

12 18 9.5e-05 0.009 17.3 2.3 1 23 728 750 728 750 0.96

13 18 0.0004 0.037 15.4 1.5 1 23 756 778 756 778 0.98

14 18 1.9e-06 0.00018 22.6 1.4 1 23 784 806 784 806 0.98

15 18 0.00036 0.034 15.5 1.7 2 23 813 834 813 834 0.98

16 18 0.0004 0.038 15.4 0.8 2 23 842 864 841 864 0.97

17 18 0.00023 0.022 16.1 0.2 1 23 869 891 869 891 0.98

18 18 0.0047 0.45 12.0 1.0 1 23 897 920 897 920 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.3	1.2e+02	4.3	0.4	3	23	113	133	111	133	0.95
2	18	0.027	2.5	9.6	0.1	2	23	137	159	136	159	0.94
3	18	0.15	14	7.3	0.5	3	23	387	408	385	408	0.95
4	18	0.0017	0.16	13.3	0.0	1	20	416	435	416	436	0.97
5	18	0.0033	0.31	12.5	0.2	2	23	447	468	446	468	0.93
6	18	0.64	60	5.3	0.7	1	23	484	507	484	507	0.91
7	18	0.014	1.3	10.5	2.2	1	23	516	539	516	539	0.94
8	18	4.9	4.7e+02	2.5	0.5	3	20	617	634	616	638	0.78
9	18	5.9	5.6e+02	2.2	1.6	1	23	643	666	643	666	0.91
10	18	0.00011	0.01	17.1	1.2	1	23	672	694	672	694	0.96
11	18	6e-06	0.00057	21.1	2.7	1	23	701	723	701	723	0.98
12	18	9.5e-05	0.009	17.3	2.3	1	23	728	750	728	750	0.96
13	18	0.0004	0.037	15.4	1.5	1	23	756	778	756	778	0.98
14	18	1.9e-06	0.00018	22.6	1.4	1	23	784	806	784	806	0.98
15	18	0.00036	0.034	15.5	1.7	2	23	813	834	813	834	0.98
16	18	0.0004	0.038	15.4	0.8	2	23	842	864	841	864	0.97
17	18	0.00023	0.022	16.1	0.2	1	23	869	891	869	891	0.98
18	18	0.0047	0.45	12.0	1.0	1	23	897	920	897	920	0.97

Sequence Information

Coding Sequence: ATGGCGTCTGATGAATCAGACGATGAACCCTTGTCGATATTAGCAGCAGCCAAGAAGAGTGATCCCCAGAAGTTTGATTGTGAAATAATTCCGGTAGACGATAAGGCTTCTAAAAAGCGAAATACTTCAACTAAGAAGACAagtttaacaattaaaataaaccgTCGACTCAAAACGGTGACTGCGCCTCCAGTAATAGACAGACCTACGGATGTTTGGTTatatttaaaagatttaaaccCAACTGGACCCTACAAATGCCTTCTTTGCGCAGACTGGTTTATAAATCGCTCCAAAATGGTAGTTCACTACGTCCTTAATCACAAAAAGGATTTTTGTGGTATCTGCaggtattttgttaATGATCGTGAAAGTTGGAAGCTACACGTCAAATTCCATGAGCCATGGCCATGCTCTCAATGTGTAGAAACATTTCCATCAGAACTGTCTCTCAGGCAGCACCTCAGTTCTGTGCACCAGCTAGTCCACTGCCGTCTGTGCCACTTCAGATTGCCGGTTGGAGAACAATACGATGCTCACCTAGGCCAGAAACACAATGTCTCCAATGTCAGTTGCAAGGATAATGAATGCTTTTGGGATATAGAAGACGAAGACTTGCCAAAGTTCAACTGCTTTCTGTGTGACAAGCAAAACAATTTATCATCTACATTCTTCACTCACTACATGGGCTATCATCACTTCACTTTGAAATGTATTACAACCTTTATTTCTGGTACCGATCCACCTTTCACAGTACATGGTGCTGAAATAAGCACACAATTTGTTGATGGGCAATTGAAGGATCTGAATGCCTTTGGCTATGTTGACTTGGAGCAAAAGCCAGGTGACATTGTCCTGGAAAATAATCAGTCAGACGTTAATGTTATTGATGCATCAAAACCAGTGGCTGAAATTAAGAATGAAACTGAATGTAATGAATCTAAAGTTATGGAGAACTTGCCAAATAAAGTGGAGAACCAGTTTGATGTAGATGCTTACGAGGGAGACGATGACTTTGATGTAACACTAACGGAGTTAATTATACTTCAAAAATGTTACTTTGAATACATAAAAAAGGTATTACATGATATCTCTCAGAACTTAGTCCCTGTTATCTCAGATGTTAATAATAGAAATGATGTTGTTCTTAATGTGAATTGTCCGTTATGTGACAGCAAATTCTATACTGGACAATTATTTATGAGCCATATGTATAAGATGCACAACGTTAAGTCCATACCTAGTTACTCGTGTAGGGTATGTGGCACAAATTTTGATAGTCCGAATGAGTTGGAGAGTCATATTGTGGACgagataaataattttgaaaatttatggATCTGTCAATTTTGTGATAAAGAATTCAGTAACCGAGAGGCGGTGAGGGAACATTTGACTGATCATTGGGAGGCTATTGAGTATGACAACTGCTTCAGCCCTCACTTAGGGTTCAGATGCAAGTATTGTCCGACTCTATTTTGGAATGAGACTGACAGGGAGAGGCACCAAGTTAGAGTACATTTTAGTAAATACACAGATCAATTTTATAAATGCAGTAGTTGCTCTGTAACCTTCAGTGATAAGGTATGGTACATACATCATTACTTAGAAAAGCATTTGAATGGAGAGAAAATGGGAACTTACCTGTTGAAATGCTGTGTTTGCTGTGTAGTTCTCTCTAGCATTGAGGAGATGAGGACCCACTTCGTAGACCAGCATCCTGAGGCTAGGAAGGTGTACTGTTCCCTAGACCCCTGTAAATACAAGCCTCTCAGTCAGCGGAAGTCTTTGAAACTGCATGTCAAGGCAGTGCACACGGTGCGCGGCGGGCCAGAGAAGCCGGTAGCGTGTCCGGTGTGCACGCGCGAGTTCCCGTCGGTGCGCTCGTGCAACGCGCACGCGACGCAGGTGCACGGGCCCGGCAAGTTCAAGTGCAAACTGTGCAAGGCCATGCTGCATACATTGGATGAACGTAAGCTCCACTACCTGCTGATCCACCCCGGGCGGCACCCGTTCGAGTGCGCGGAGTGCGGCAAGTCGTTCCAGTACAAGTCCTCGCTGTACATGCACAAGCAAGACCACCTGCCTAACAAGCAGAACTACACCTGCAACTACTGCAACAAGGAGTTCACTAAGAAGGACTCGTTCCGCGAGCACCTGCAGATCCACGAGGGCCCGCGCCACGCGTGCTCCTACTGCCCCATGCGGTTCGTGCAGCGCTCCAACATGCTCCGCCACGAGCGGCGCCACACGGGCGAGCGCCCGTACGCCTGCCCGCACTGCCCGCGGACGTTCGCCGACAAGGGCGCTTGTACCTCGCACGCCAGGACCCATTCTAAGGAGTCTTCCTACGCCTGTCTGTACTGCGGGCAGACCTTCGTGCAAAAGTCGAAACTCACTTATCACATAAGGAAACACACGGGTGAAAATCTGGAGACGTGTTCGATCTGCTCGAAGCTGTTCACGAGCGCGTGCGCGTTGCGCGAGCACATGAAGATACACCTGTGCAAGAAGGAGTCCGTCAAGTGTCCGCTGTGTGACAAGAAGTACCAGGACGAGCGCTACATGCTGCGCCACCTGCGCACGTCGCACACGCGCACGCAGTTCTCGTGCCCGCTGTGCCAGAAGGTGGTCACCAGCGCCGTGGGGCTGCGGCACCACGTCATCACGCACAGCCCGCTCAACACCTTCCGCtgtcgAGTATGTCCAAAGTCGTACGCAGTGAAACGGACGATCGTGAAGCATTTGCAACGACGTCATTCACTGAGCAGCGCCGAGGTCAACCTTAAAGACTACTACACCCGCCTGGAGCCGAGGCAATGCAAACTGGACCTCGATGAGGAGACCATGACCAGGGTCTTCGGACCTCCCAAGAAGAGACCCGATATACTCATAACGGACTTTGTTACCTATACCAGAGACAAGAACCCGAAGAAAGACTCAAAGGAAGCGAGCGAGCAAGACGTATCAGAGAAGGACAGCGATAGTAACACTGATAATGAAGCGCAGAAGGAACCAGAACGGAAGATCAAAGAGGAGAACCCAGATGATATGGATCAGGACTTCGCAAGCAATGAGTTGGAGCCGACTGACTTTGTCAGTGTTAAGATTGAACCTATCGAGGATGATGAAATGCAATAG
Protein Sequence: MASDESDDEPLSILAAAKKSDPQKFDCEIIPVDDKASKKRNTSTKKTSLTIKINRRLKTVTAPPVIDRPTDVWLYLKDLNPTGPYKCLLCADWFINRSKMVVHYVLNHKKDFCGICRYFVNDRESWKLHVKFHEPWPCSQCVETFPSELSLRQHLSSVHQLVHCRLCHFRLPVGEQYDAHLGQKHNVSNVSCKDNECFWDIEDEDLPKFNCFLCDKQNNLSSTFFTHYMGYHHFTLKCITTFISGTDPPFTVHGAEISTQFVDGQLKDLNAFGYVDLEQKPGDIVLENNQSDVNVIDASKPVAEIKNETECNESKVMENLPNKVENQFDVDAYEGDDDFDVTLTELIILQKCYFEYIKKVLHDISQNLVPVISDVNNRNDVVLNVNCPLCDSKFYTGQLFMSHMYKMHNVKSIPSYSCRVCGTNFDSPNELESHIVDEINNFENLWICQFCDKEFSNREAVREHLTDHWEAIEYDNCFSPHLGFRCKYCPTLFWNETDRERHQVRVHFSKYTDQFYKCSSCSVTFSDKVWYIHHYLEKHLNGEKMGTYLLKCCVCCVVLSSIEEMRTHFVDQHPEARKVYCSLDPCKYKPLSQRKSLKLHVKAVHTVRGGPEKPVACPVCTREFPSVRSCNAHATQVHGPGKFKCKLCKAMLHTLDERKLHYLLIHPGRHPFECAECGKSFQYKSSLYMHKQDHLPNKQNYTCNYCNKEFTKKDSFREHLQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACPHCPRTFADKGACTSHARTHSKESSYACLYCGQTFVQKSKLTYHIRKHTGENLETCSICSKLFTSACALREHMKIHLCKKESVKCPLCDKKYQDERYMLRHLRTSHTRTQFSCPLCQKVVTSAVGLRHHVITHSPLNTFRCRVCPKSYAVKRTIVKHLQRRHSLSSAEVNLKDYYTRLEPRQCKLDLDEETMTRVFGPPKKRPDILITDFVTYTRDKNPKKDSKEASEQDVSEKDSDSNTDNEAQKEPERKIKEENPDDMDQDFASNELEPTDFVSVKIEPIEDDEMQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01082695;
90% Identity: iTF_00887635;
80% Identity: -