Basic Information

Insect: Thymelicus acteon
Gene Symbol: -
Assembly: GCA_951805285.1
Location: OX638230.1:9379793-9401553[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00013 0.013 16.8 0.1 1 23 538 560 538 560 0.98

2 11 0.00013 0.012 16.9 4.3 1 23 576 598 576 598 0.97

3 11 0.00046 0.043 15.2 2.6 1 23 604 626 604 628 0.97

4 11 1.4e-06 0.00013 23.1 3.7 1 23 633 655 633 655 0.99

5 11 1.4e-05 0.0014 19.9 0.2 1 23 661 683 661 683 0.93

6 11 7.6e-08 7.2e-06 27.1 0.1 1 23 689 711 689 711 0.98

7 11 2.4e-06 0.00022 22.4 1.6 1 23 717 740 717 740 0.96

8 11 0.00083 0.079 14.4 3.6 1 23 746 769 746 769 0.95

9 11 6.7e-05 0.0063 17.8 1.7 2 23 776 797 775 797 0.97

10 11 2.2e-05 0.0021 19.3 1.0 1 23 803 825 803 825 0.97

11 11 0.0033 0.31 12.5 0.1 1 23 831 855 831 855 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00013	0.013	16.8	0.1	1	23	538	560	538	560	0.98
2	11	0.00013	0.012	16.9	4.3	1	23	576	598	576	598	0.97
3	11	0.00046	0.043	15.2	2.6	1	23	604	626	604	628	0.97
4	11	1.4e-06	0.00013	23.1	3.7	1	23	633	655	633	655	0.99
5	11	1.4e-05	0.0014	19.9	0.2	1	23	661	683	661	683	0.93
6	11	7.6e-08	7.2e-06	27.1	0.1	1	23	689	711	689	711	0.98
7	11	2.4e-06	0.00022	22.4	1.6	1	23	717	740	717	740	0.96
8	11	0.00083	0.079	14.4	3.6	1	23	746	769	746	769	0.95
9	11	6.7e-05	0.0063	17.8	1.7	2	23	776	797	775	797	0.97
10	11	2.2e-05	0.0021	19.3	1.0	1	23	803	825	803	825	0.97
11	11	0.0033	0.31	12.5	0.1	1	23	831	855	831	855	0.94

Sequence Information

Coding Sequence: ATGTACCAGACCTGCTTTGTGTGTGATGTTAACAATATTGGGGTTCGAAAtggatttaatttatttgcagAAGAAACCACCCTTCAGTCGAGAAAAAAGATGATAGAAGTGTTAAGTGAGATATTGGACAAACCAATTGACGAAGAGAATGTTCATTCAAAAAGCATATGTAAAAAATGCCACAAATTGGTATCTGAGTACGATTTGATACAAATAAGAATGCAAGTGATAAAACTGGATCTTCAATCTGCCTTCAAAACTACCCTTCCCCGCCACAAACTGAACTACGACACATATAATAAGGAGCAAGTGATAATTCAAGTACCGGCATTGAATACTGTTGAGAATAAGATGGAACACATAAAGACCCTAGTGTTGCCCGCATCTAAACTTCAACCGGTGCCTGCAGACTTCGTTTTGAGATCTGGGAAATGGTTGAATACCAAAAATAATTCTAGTAAGccCATTGTAACTTTACCATCATCAACGGCGACGCTGAACTTAAAAGTGACCGTTGGTTCGTCGGTTCTTACACAGAGCATCAAAACAACTAATGCTATTGGTAACAAAATAATATCCTTATCAAACAGTCCTAATAATACAGAAAACTACATTTTAGCACAAAAACCAGAAGAGAATTCCACAAATgcagaaataaatatagacgcGAATTCGTTATTGCAAACCATTGAACCTCCAATAAGCTTATCGTCACTAACTTATTCATCACCTAATATATCTTCAGCTAAAATGAACAATTCCATAATAAACTTTAATGTGAAGCCGTTGCCAAAGGATTTTCTGTCTTCCGCTGTATTTAATAAGGTTGATGAGAATGACCTAGTCGAACTGCAGATTAATTTGAAGAAGGAGATTCATGAGCATAGTGATACGGAGAATAATGATGAACAGCCTATGGAAATAGATGAagaCTGTTCCTTGGCAGTTAGTAGTAATAAAGATAAATCCTTCACCAAAGATTCCGACCAGAACGAATCTAACAAATCCAAAGATTTCCTAGACAATCTCCTACCTGGTCTGACATCTAACGAGGACACGAATGACGGGGACATTGGGAACAAGTATATAGTCGGCAAGCTGGAGATACTCAACGACAGAGACGATGACGAGGATGGCCCAACAATCGTAATGGACGGTGAGAATGGTTCCATCATACGGCTAGTGTCGGGACAAAAGTTTTTGTACGGCGACAGCGAGATATCATTGGTGGTGCCGGAAGAGTCGCAAGACTGTGATAATGATAATGCTGATAGTCAAGATTCGAATGATGAATCGCAAATAGAACTGCAAGTATCTGGCGACGAAGAAACGGCCAATGCTATTATTGCAGCGGCTCAAGAGCAAGgcGGTGCTTTCATAAAAGTGGAGTCTGGTGAGATGTATCGAGTGAAATCAGTTCAGAGTAAGAAGACCGATGATACAGTGACCAGTATTGATCTACAACCAGCTTTGAACTCGATGGTTAGGCAAGAGGAAAATGGTCAATTCAAATGTTTACTCTGCGAGAATAATGAAAAGAAAGAAGTAACGTTCGTCGGCGACGCGGACGCCACGATGCAGCATCTGAAGGGGGAGCACGCAGCCAGGGTGTATATCTGCGGGGAGTGCGGACAGGTCGTAAGGAAACGGAGCGAATACGTTGCGCATATGGaAACGCACTATCCGAAGGAGAACAATATTTTACAAATGGACAAGACTAAAACCCATCAGTGTAATATATGCAATCATACTTACAGGTCTCAAACTGCCTTGTCGAAGCACATGCTTCTGCATAACGGGGCGAAGCCCTATAGTTGTAGTATATGCAATAAATCATTCGCGTCCAAGTATACACATCAGTCGCACCTTAAAATACATATGGAGCGAACTCGGCTGTTCAAATGCAAGCAGTGCGGCAAATCGTTCTTCACGCAGCAGAACCTCAACCAGCACGAGAAAACACATTCCGGTGTCAAGGACTTCATCTGTAATACTTGTGGCAAGGCATTCGCGTCCCAACACAACCTGGAAGTCCACGGAGTAGTACACTCGGGCAACAAGCCGTTCGTGTGCGGCGACTGCGGGAAGGCGTTCGCCCGCCGCGCGGAGCTCCGGGACCACATGCGGATACACACtgGCGAGCGTCCGTTCTCGTGCGAAATCTGCGGCGCGAGCTTCACGCAGCGCTCGAACCTGCACTCGCACCGGCGCGCCACGCACATGGACGACAAGCGCTACCACTGCACGCAGTGCCCCAAGAGGTTCAAACGACGCAGGTTACTAGACTACCACATAAAGGCGTCGCACACTGGCGAGCGGCCGTTGAAGTGCGAGATTTGCAAATCTACCTTCGTGTACCCGGAACACTACAAGAAACACATTCGGATACACAGCGGGGAGAAACCGTATGTTTGTGAGGTGTGCGGCAAGTCGTTCAACTCACGCGACAACCGCAACACGCACCGGTTCGTGCACAGCGACCGCAAGCCGTACGAGTGCGTGGTGTGCGGCGCGGGGTACATGCGGAAACAGCTGCTGTATCAGCATATGAATACCACGGGCCATTTAGCTGAGTCGATAGTTGTGAATCAACCGCGAGTGGTGAAGGGACTTAAGAATATATACGAAACCACAGATGAGCTACAACTGCATACAGAAGATGGAAAACTTGttGTAACTGACCCAGACAATACggcaaaattatttataactgAAGATAAGAAACTTATTATTCAAGACGGTAAATCGATAAATGTTGTGCAAGACTCTGATGATTCTGCGTTACTTAGTCTACAAACTGCGGACGCCAGTTTCAAAGCAAGTACTGCCGTCTTAGAAGGGATCACCGCTGAGCAGTTGGAACAAGTACAGTTGATGACATCTGACGGGTCTGGCACGTCTCTTCGTCTGGTGCAAATACAACTGGCGGACGGAAACAACGGCTGGCTCGCGATCAACCAATGA
Protein Sequence: MYQTCFVCDVNNIGVRNGFNLFAEETTLQSRKKMIEVLSEILDKPIDEENVHSKSICKKCHKLVSEYDLIQIRMQVIKLDLQSAFKTTLPRHKLNYDTYNKEQVIIQVPALNTVENKMEHIKTLVLPASKLQPVPADFVLRSGKWLNTKNNSSKPIVTLPSSTATLNLKVTVGSSVLTQSIKTTNAIGNKIISLSNSPNNTENYILAQKPEENSTNAEINIDANSLLQTIEPPISLSSLTYSSPNISSAKMNNSIINFNVKPLPKDFLSSAVFNKVDENDLVELQINLKKEIHEHSDTENNDEQPMEIDEDCSLAVSSNKDKSFTKDSDQNESNKSKDFLDNLLPGLTSNEDTNDGDIGNKYIVGKLEILNDRDDDEDGPTIVMDGENGSIIRLVSGQKFLYGDSEISLVVPEESQDCDNDNADSQDSNDESQIELQVSGDEETANAIIAAAQEQGGAFIKVESGEMYRVKSVQSKKTDDTVTSIDLQPALNSMVRQEENGQFKCLLCENNEKKEVTFVGDADATMQHLKGEHAARVYICGECGQVVRKRSEYVAHMETHYPKENNILQMDKTKTHQCNICNHTYRSQTALSKHMLLHNGAKPYSCSICNKSFASKYTHQSHLKIHMERTRLFKCKQCGKSFFTQQNLNQHEKTHSGVKDFICNTCGKAFASQHNLEVHGVVHSGNKPFVCGDCGKAFARRAELRDHMRIHTGERPFSCEICGASFTQRSNLHSHRRATHMDDKRYHCTQCPKRFKRRRLLDYHIKASHTGERPLKCEICKSTFVYPEHYKKHIRIHSGEKPYVCEVCGKSFNSRDNRNTHRFVHSDRKPYECVVCGAGYMRKQLLYQHMNTTGHLAESIVVNQPRVVKGLKNIYETTDELQLHTEDGKLVVTDPDNTAKLFITEDKKLIIQDGKSINVVQDSDDSALLSLQTADASFKASTAVLEGITAEQLEQVQLMTSDGSGTSLRLVQIQLADGNNGWLAINQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00887606;
90% Identity: iTF_01439231;
80% Identity: -