Tact010310.1
Basic Information
- Insect
- Thymelicus acteon
- Gene Symbol
- -
- Assembly
- GCA_951805285.1
- Location
- OX638217.1:15160596-15170553[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0082 0.77 11.2 1.5 3 23 729 750 728 750 0.96 2 23 0.032 3 9.4 0.6 1 22 1123 1144 1123 1144 0.95 3 23 4.3 4e+02 2.7 0.4 1 22 1186 1207 1186 1209 0.82 4 23 0.031 2.9 9.4 0.7 3 21 1220 1238 1218 1239 0.94 5 23 0.56 52 5.5 0.1 2 23 1247 1269 1246 1269 0.89 6 23 0.007 0.66 11.5 0.1 3 23 1290 1311 1288 1311 0.96 7 23 0.0036 0.34 12.4 3.2 1 23 1317 1340 1317 1340 0.95 8 23 0.15 14 7.3 0.0 1 23 1367 1390 1367 1390 0.90 9 23 0.022 2.1 9.9 3.4 1 23 1395 1417 1395 1417 0.97 10 23 0.0076 0.71 11.3 0.2 1 23 1423 1446 1423 1446 0.95 11 23 0.0027 0.26 12.7 1.3 1 23 1459 1481 1459 1481 0.97 12 23 0.00021 0.02 16.3 1.8 1 23 1533 1556 1533 1556 0.97 13 23 0.005 0.47 11.9 1.6 1 23 1622 1645 1622 1645 0.96 14 23 0.0011 0.1 14.0 2.0 2 23 1670 1692 1669 1692 0.95 15 23 0.0056 0.53 11.8 0.1 2 23 1698 1720 1697 1720 0.95 16 23 0.015 1.4 10.4 0.2 1 21 1763 1783 1763 1784 0.95 17 23 0.0014 0.14 13.6 0.6 1 23 1794 1816 1794 1816 0.93 18 23 0.00031 0.029 15.7 0.4 2 23 1907 1929 1907 1929 0.93 19 23 2.1e-07 2e-05 25.7 1.1 3 23 1936 1956 1935 1956 0.98 20 23 0.0049 0.46 11.9 0.3 1 23 1975 1998 1975 1998 0.93 21 23 0.072 6.8 8.3 0.0 1 23 2025 2047 2025 2047 0.98 22 23 0.032 3 9.4 0.6 1 23 2053 2076 2053 2076 0.95 23 23 7.5e-05 0.0071 17.7 0.3 1 23 2084 2107 2084 2107 0.96
Sequence Information
- Coding Sequence
- atGAGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATATTTCCTACCACCAGTTCGGATGACTCGGAACCTCCTGTCCTCGCATCAAAAATAAGGGACTGCGTTTCCGTACAGATAACAGAGAATGACGACCTGCCAACTAATGTCTGCAGGAAATGCATGGACAATGTCAATAACTGGCATATATTTAAGGAAGTTTGTGAAAGGACACAAAACAAGCTACAGTCTCTGAGTAATAAAGATGGCAGCCTACTAGAAGAGATTAAAGTCAAAAATGAGCCTTTATCTGATGAGGCCTATGATGATGGAGTGGTCATTGATGGCTCCTATCCTGATATTGAGAATGGAGGTGTGGCCAATAAATTGCAAACAGAAGGGCCACCAATCTTGGCATCATTGGGGCTCACACCGAGGAGTGATAAGACATATGTAGATCCCCGCATGGATTGGCATCGGGTCCATGCAATTATGCGCATGGTTCAAGATGATGAAGCCGTAGACTCACTCCAGTCCACAGAAGAGTGTGATATTGTGCATCAATCAGACCATGACTCAGATTCAGATGCTGAATTAaatgatgatgttgatgatgaatttattaattgtaaaaaTGGCTTCTTGCTTCGCAACAGGCAATATTTATCTAAATACCCAAAGTTATCGTCATCTGCAAATCATGCAAAAGCAAAGGAAGTTGTAAAATTAAGAAAACGTAATGCTAATATGTTTAGACATTATCCCCATCCAAAAAATGCTTGGCAGTTATTTTTCACAGATGATTTGCTAGAACTCATTGTGGGCTCTACCAATGAGAGAATTTGTATGGCCCAAAAGAGTCAGAAGGAATCATTTCATTCAACTAATGTAActgaaattaaaacatttattggTATACTATATTTACATGGAATTATGAGGCCAACCCACCCAAAGTTCAGTGACATATGGCACAGCAAATTGGGGTTTTTGTCTGTTCAGAGAGCCATGAAACTTGAGCGATTTAGATTCCTGCTTCAGAACTTGAGTTTTGATGACAAAGATTGCAACAGTATCATACAGTTAGATGTAATGAAGCGATTTCGTCaagtatttgaaatatttgcttTGAATTGTAGAACAGCATTTGAAGTTCGGAACATTACTGTTATTGATGAAATAATTGTACCAGTGAATGGGCCTTGTCCTTTTCGATACAAGATTGAAAAAAAACCATTTCAGTCCggaattaaaatagttttggcAGTTGATTCATCAAACTTCTATGTTACGAATTTGGATGTTATTACAACTAGATATTTTGCAGCAGATGACATTGTCAAAAAGTTAGTTCAGCACTTGGCAGGAACGGGGCGATGCATTCTTGTGGATAGTTGGTACACTTCCCTGAAACTAAtagaaatgttgaaaaatgaGTATCAGCTGTACTGCATAGCGGCTCTTAATCCAAATGATAACATGATTCCACCATTGTTCCTGTCCAAATATAGAATAAATCAACCATTTATGAGTGGATTTCTGAACAATGATGTGTCATTGTCTTCCTATGTTAATGCAAAATTACAGTGTGCAAATGTTTTGACAAGTGAACCCAGCTTTTATAAAAGAGGTCATGCCAATCATACTACAGTAGTTTCAGTCTATAAAAAGAACAAGTCCATTGTGGAAGTTTTGGATGTTCTAATGCATTATTATACAACAGCACAAAATACTAACGATTGGACCCTGTCGTTGTTCTTCACTCTCTTGAACATAGCTGTGGTGAATGCCCAAGTTGTATGGAGTTCTTTTAACTCAGAGAAAATTGTTCAGCGAAGAGTTTTCATCAAGGAATTGGCACTAAGTCTTTTGGACAGAGATGGTTTTTTACCGAAATTTAAGATACCATTAGACCTATCAAAGAACCTACAAGGTACAAAAGAACTTCCAAGTGCACCACAGGAAGTATATTACAAGAACAGGAAGAGGTGTAAGATATGTGGCGCAGACAGCGACAAGGACGAGGAAgatgaagaagaagatgaaGAGATGAATGAATCCCAAACTTATCCACCAATAGTGAACGTTCCAAACATGCCAGAAGTTTCTATCACGGTTATGCGGCCCACAGGAGAGACGTTACATGCACGACAAGGTATCCAACAACTCGCATCTAAAGACTGCCTCGTTTGTGGTCGATCTTACCGATACTCCCATAATGCTAGACGCCACGAACTCACATCCCACGGTTTCGATAGATACACAAACAAAACAACCCACAAGAAAACCTCATCGCACCTACAACCAAAACTTAGGCCTAATCCTTTTAATCCCAAAGCGCGGTTGATGCCTAACCCTATTAGTCATAAAATGCAACTTCTCCCGAAGAACATTCCGACTAAAGCTGTTCCACAAAAAACTGTCACTCCAGCAAAACCAATACCCATCAAAACTATAAAACCACCACAACAAAATCAAAATCTGCCATATCCGTTACGTATTAAAGCATTAAAGGATTTACAAATTAAAAAGAAGGAACCTCAAATATTAAAGACGCTTCTGACAACTAAGCCTGAAGTACTGATCTCGGAACCAGAAATAATTAATTCGGGCCCAGAGAGCCCTGAAACTTTAATATCGGAACCAGAAATAGCATCTTTCCAGGTAGAGGCTATTCTGTCTGAGCCGGATGGCTTGGTGAACCAACACGACGAGGATATAGATCCACGCCAATTTAAATCAAACAATCATGGTCAGAACTATGACACAGTCGATATGGATACTGACAATGAAATTGAAATCGCTCGCCAGCAAGAGAATGAGTGTGAAGATGAACCAGATGCAGATAACGATCAAGAAAATACAGCAGCAGCTCATAGCGATACTGAGAAACAGAAGGAAGAAGAAGGCGAAATTAAAACTGAGGATGATACGGAAAATAACGACGTAAACAAAGATGATGAACAAACAAAAGAAGATGAGGAGAGAGAACATGAAGACCAAAACCATCAAGATGAAAATTTTGAAGACGATGATGATGAACTCCCACCTGTGAGTTTAGCGCCTGTTGTGGAAATTAATGAAGATATGCAAAATAACTCTTACAACAGTGAATTAAATGAAGAGGAGGATGAAGATTTAGAATCAGCAGATGCTAACGACACAGTAGATGGGGATGATAACATGAAAGAGCTGGATCCAAATAAGGTTTATGTTACGAAATTACAGCGAGATTTTATTGTCAAGTATCGTGACATCATTGAACAAATCAATACCAAGAAATGCCTTTGCTGCAACAGGGAACATCCGCGCAGAAAAGCAGTTATCCAACACTTACAAAAGAATGGCCACAAAGTACCTAAACATACTTGTTATAATTGCGTAATAACTTTCAGTCATATTGGGGCATTACTCAGTCACATGAGGTCTAATACTTGCACCGATTTATGGAAGATAATATATAATGAGAATGGAATTACAGATGATCTTGTATTGGAAGATGAACCGAAAGATCCTAAGGTTCAATACAAGGACATATTTAACGCTAGGTCTTACTCTTGTAAGTTGTGTCCAGCGAAATTCCAGTTGAAACAATTTATAATGAAACATGTCTTGGATGTTCATGAAGATAATCAATCAAAAGTGCATTTGGCTTGCGTCCATTGTGGTTCTAGATTCAAAGATACAAAGTTGTGGAAAAAGCACATCCGGAATGGTGAATGCACTGTGTATATTTCGTGTGACTTATGCTCAGAAAAGTTTGTCAATATGCAAGACTTTAACGATCATGCCTTAGCCGTACACGCTGGCAACTTTGATATGTCTGATAGCCACACCAAATGTGTCGACGGTCGACCAACAGATTGTCCTATATGCGGCAAAAAGAACAGCAGTTATCCTAATTTGGTCAAGCACTTGAAGATAATTCATAATGAGGAAACTCCTCATTACTGTCAGCATTGCGATGCTAAATTCGAGCAAACTGCCGATCTCAACAAGCACATATACATGCAACACTCCGATAGATCTCTAGGTGTACAGATTTCAACAGAACCAGACATGTCCCTCGTCAAGGAGGAAGCCGAAGAATATCATTATTCTTGTACAGAATGCAATGCCATTTTCGAGACTGTAGATGCATGGACTGATCATCAAGTGGCAGAACACAATCAAGTTGCTCATCATTGTGATCAATGCGAAAAGAAATTTTTGCGACCCTCTGAGCTGGCCGAACATAAAAATACACATTTGCGAGTGAAATTTTACCCTTGTAATATTTGTTCAAATTCGTACAGTACTCCTCAAAAGCTCTCCGAACATGTCCAACAGGTTCACCCCGGTTCAGGGGGATATAATTCTCTGGATGCTGAATTCTTCTGCGACATTTGTATCAGATCATTCAAGAGCCGCCAGGCATATTCTAATCATATGCGTATTCATTCTAAAGTACCGACTACTAACAGGAAGCCTGGAGATGGTGGTAATATGAAAGGATTCCCTCCCCAAATTATTGGAAAACCAATACGACACTTCTCTATGGTCCAGCCAAGCTTCCTATCATTCAAGCCAAATTGTAATGTTCCTAACGCACCTTATTCTTGTGATATTTGTGGCAAAGGTTTTATGCATAAGAAAAATATATGGAAACATAAGAAGGTTCTACATGCTGATTTAATAAACGATAGAAACGACAGCGAAGAGAATACTATGGCGGCATCAACAGAAGAAGATGACTACAACATGGATGAAAATGGCGCCATCTTGTCGACGCCGCAGTTCAACAGTTTCAATTTTACAAATATGACGAACAATGTACCGCaacagccgcagccgcagccgccgGCACAAGACCCTATGCCGTATTCCTGTGAACTGTGCTACAAACGATTTCCTCTTAGAACAAGTCTGTGGAAGCACAAACGTGCCAAGCATGGAATTATTAACGCCAGTGCTATAGGTCCTTCAGATTCTCAGGGAACACCAAATGAAGCGTCGGGGCGATCGAGTTGTACTATATGCAAAATAAGTTTCTCTGACAAGAAGTCCTATTATCGACACAGGAAAAATGTCCATAAATCTACCGTGCAAATGTGCAAGATCTGCGGTAAACCACTCAGTTCCACAGTCGAGCTTTATGAGCATCTGAGAGCTGCTCATGCACAAGAATTGCTGGGCTACAACGCTAGTCAGGGACCTAGCAAGCAAGAAATAGGACAAGACATGGAAGCTGATTATGAACAAGATCAGGATTCCATGGATCCTAGTGCGGAGTATCAGGCACGTTATCCGTGTGACACGTGCGGAAAACAGTTCGTAGGGCTTCTAGCATTGCAAAACCACCAGTGCCTCAATCAGATGCAATCTCAGCCGCAGACTTTTGACTGCGAGATTTGTCACAAGAGCTATACATCAATCGCTGCGCTCAAGAGCCACCGAGGCTGGCACTTACGTTCCCCCGATGGTAAGGCCGCCGCCAACAACTCCGGTCTTTGGATGCCGCAACACAAAGTTACAAGCAAAGTGAGTAAACATGAAGTAGTCGATGCTTCTCAACTGGCCAAAGTTCAACATACAACTCCGGTGAGCATGGTTGCGAAACGAAGGTTACCACCTGAAGTGGAAGTGACCGTGGTTAATCCGAACAAAAAATTGCGATCGGATGACTCTGTAGAAATGGatcaacaaaacaattcatCCTCAGGAGTGGACGACAGGTATTGTAACTTATGTGACAAGGAGTTTACGAAACGGGCGGCGTACCAACGCCACATGGACGAGGTTCATCAACCGAACTCCGTTTTCTGTCCGGTTTGCGACAAAAGTTTCACACGGAAGTCGACGTTAATAGTTCACATGAAGAAACATTACGATGGAGGTGAGGGTAGTTCTACGGGAACGTGTCAGATGGATGACGATGCTCACGTGTGCGATGTTTGTGAGATGTCGTTCGAGACTGCGAATGAGTTGAGTGCCCATCGCTCGTTACAACACGGCGACGGGGACGGAGAAGGCGAGGAAACCGGCGAGTCTGACGATGAGGGAGTGGGTAATGTCCAGCAGCCAGGGGAATTCACCTGCAGCCAGTGCGGCGACGGTGTAGCCACGCCCCGCGATTTAATCGCTCATCGCGCAATGCACGCCACACCGACCAAGTTCTTTTGCAACATTTGCAAAGTATACTTTGCCCGAGCTCTCGATCTCTCCTCACACACCAGAGCGAGACATTCGGACAACGACAAAGTTTGCTTCCCTTGTGCCATGTGCGACCGTTCTTATATGAATAAGAAAAGTTTGCAGCGTCATATTGAAATGGCTCACTGA
- Protein Sequence
- MSVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLASKIRDCVSVQITENDDLPTNVCRKCMDNVNNWHIFKEVCERTQNKLQSLSNKDGSLLEEIKVKNEPLSDEAYDDGVVIDGSYPDIENGGVANKLQTEGPPILASLGLTPRSDKTYVDPRMDWHRVHAIMRMVQDDEAVDSLQSTEECDIVHQSDHDSDSDAELNDDVDDEFINCKNGFLLRNRQYLSKYPKLSSSANHAKAKEVVKLRKRNANMFRHYPHPKNAWQLFFTDDLLELIVGSTNERICMAQKSQKESFHSTNVTEIKTFIGILYLHGIMRPTHPKFSDIWHSKLGFLSVQRAMKLERFRFLLQNLSFDDKDCNSIIQLDVMKRFRQVFEIFALNCRTAFEVRNITVIDEIIVPVNGPCPFRYKIEKKPFQSGIKIVLAVDSSNFYVTNLDVITTRYFAADDIVKKLVQHLAGTGRCILVDSWYTSLKLIEMLKNEYQLYCIAALNPNDNMIPPLFLSKYRINQPFMSGFLNNDVSLSSYVNAKLQCANVLTSEPSFYKRGHANHTTVVSVYKKNKSIVEVLDVLMHYYTTAQNTNDWTLSLFFTLLNIAVVNAQVVWSSFNSEKIVQRRVFIKELALSLLDRDGFLPKFKIPLDLSKNLQGTKELPSAPQEVYYKNRKRCKICGADSDKDEEDEEEDEEMNESQTYPPIVNVPNMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELTSHGFDRYTNKTTHKKTSSHLQPKLRPNPFNPKARLMPNPISHKMQLLPKNIPTKAVPQKTVTPAKPIPIKTIKPPQQNQNLPYPLRIKALKDLQIKKKEPQILKTLLTTKPEVLISEPEIINSGPESPETLISEPEIASFQVEAILSEPDGLVNQHDEDIDPRQFKSNNHGQNYDTVDMDTDNEIEIARQQENECEDEPDADNDQENTAAAHSDTEKQKEEEGEIKTEDDTENNDVNKDDEQTKEDEEREHEDQNHQDENFEDDDDELPPVSLAPVVEINEDMQNNSYNSELNEEEDEDLESADANDTVDGDDNMKELDPNKVYVTKLQRDFIVKYRDIIEQINTKKCLCCNREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFSHIGALLSHMRSNTCTDLWKIIYNENGITDDLVLEDEPKDPKVQYKDIFNARSYSCKLCPAKFQLKQFIMKHVLDVHEDNQSKVHLACVHCGSRFKDTKLWKKHIRNGECTVYISCDLCSEKFVNMQDFNDHALAVHAGNFDMSDSHTKCVDGRPTDCPICGKKNSSYPNLVKHLKIIHNEETPHYCQHCDAKFEQTADLNKHIYMQHSDRSLGVQISTEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCNICSNSYSTPQKLSEHVQQVHPGSGGYNSLDAEFFCDICIRSFKSRQAYSNHMRIHSKVPTTNRKPGDGGNMKGFPPQIIGKPIRHFSMVQPSFLSFKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLINDRNDSEENTMAASTEEDDYNMDENGAILSTPQFNSFNFTNMTNNVPQQPQPQPPAQDPMPYSCELCYKRFPLRTSLWKHKRAKHGIINASAIGPSDSQGTPNEASGRSSCTICKISFSDKKSYYRHRKNVHKSTVQMCKICGKPLSSTVELYEHLRAAHAQELLGYNASQGPSKQEIGQDMEADYEQDQDSMDPSAEYQARYPCDTCGKQFVGLLALQNHQCLNQMQSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDASQLAKVQHTTPVSMVAKRRLPPEVEVTVVNPNKKLRSDDSVEMDQQNNSSSGVDDRYCNLCDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYDGGEGSSTGTCQMDDDAHVCDVCEMSFETANELSAHRSLQHGDGDGEGEETGESDDEGVGNVQQPGEFTCSQCGDGVATPRDLIAHRAMHATPTKFFCNICKVYFARALDLSSHTRARHSDNDKVCFPCAMCDRSYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01439225;
- 90% Identity
- -
- 80% Identity
- -