Tbat008725.1
Basic Information
- Insect
- Thyatira batis
- Gene Symbol
- -
- Assembly
- GCA_905147785.1
- Location
- LR990504.1:4074821-4095476[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-05 0.61 9.7 0.0 44 108 9 78 5 112 0.63 2 2 3.5e-06 0.089 12.5 0.4 345 384 109 148 91 174 0.70
Sequence Information
- Coding Sequence
- ATGTATCATGTGGTTGGCAACAGGGATCGTGTCAGTCAGCAGATCCAGACAAAGCTTGGCGACTATCACCTCGCTCAGTGCTTCATTGACGACCCTAGCAAGTCGATAGGAATCTGCGCCGAGCCTCCTAGTCCAGCACCATGCCCTCCATCGCGGCGCGAGAGCGAGTTCAAAAAGCCGGCACACGCTCCGCAAAATGGTCGTGTACTCCACCGCCCCTATTACAACAAGAGCGAAGGTCCCAGCTCTACAGGGGCGCCAGCGCATCGGCCACCTCCCCTAAGGATACCTAATGGCTTTCAAAACCAGAACGTTATAGATAGCAGTCAACCTCCAATAGAAAGCATTTTAAAGGAGATGAAGTCTCTACCAACTCCCCTGTCGGTGATAGCGGCGACGCCGAGAAAAGAATTGGAGAACAAATTTATATTCAATCCTTACACCAATAAGGTTCAAGAAAACCCTCAGCTGACAAGCAACGATCTCAAAGCACCCCTACCTAAACCTGATCGCCCGGCAGCGGCAGCGCCACCTGTCGGCGACGTGAATAAATAA
- Protein Sequence
- MYHVVGNRDRVSQQIQTKLGDYHLAQCFIDDPSKSIGICAEPPSPAPCPPSRRESEFKKPAHAPQNGRVLHRPYYNKSEGPSSTGAPAHRPPPLRIPNGFQNQNVIDSSQPPIESILKEMKSLPTPLSVIAATPRKELENKFIFNPYTNKVQENPQLTSNDLKAPLPKPDRPAAAAPPVGDVNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -