Tbat007669.1
Basic Information
- Insect
- Thyatira batis
- Gene Symbol
- -
- Assembly
- GCA_905147785.1
- Location
- LR990507.1:1452322-1452723[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-10 2.1e-07 31.0 0.0 1 41 14 54 14 57 0.89 2 2 9.6 4e+03 -1.9 0.0 17 25 111 119 110 120 0.86
Sequence Information
- Coding Sequence
- ATGTCGGAGTCAAAACCCAGGAAAAGAGGTAGTACATGGGATGAAGACAGTTTAAGACGTGCCATGGAAGCAGTACAAAATCATCAACTAAATACAAATGCTGCAGCGTTGAAGTTCAATATTCCAAGACGCACCCTTAGAAACCATTTAGTAAGCGGTAACAGTACTAAAATAATTGGGAAGACAACTATTCTTTCTAAAAAATTAGAAGAAGATTTATCGCAGCGAATCAAACGTTTTGCAAAACTGGGTGTACCACTTACGCCTAAATTTATCAGGAAACAAGCCTTTTTATTTTGTGAGAGGTTTAAAATCAAGCACTCGTTCAATATGTCAACAAGAATGGCTGGACGCAAATGGCTCAAAATGTTTTTGGCTCGAAACCGATCAATATCAAAATGA
- Protein Sequence
- MSESKPRKRGSTWDEDSLRRAMEAVQNHQLNTNAAALKFNIPRRTLRNHLVSGNSTKIIGKTTILSKKLEEDLSQRIKRFAKLGVPLTPKFIRKQAFLFCERFKIKHSFNMSTRMAGRKWLKMFLARNRSISK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01134719;
- 90% Identity
- iTF_00276256;
- 80% Identity
- -