Basic Information

Insect: Thrips palmi
Gene Symbol: -
Assembly: GCA_012932325.1
Location: NW:1281419-1287026[+]

Transcription Factor Domain

TF Family: zf-MIZ
Domain: zf-MIZ domain
PFAM: PF02891
TF Group: Zinc-Coordinating Group
Description: This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.027 1.2e+02 2.2 0.7 43 49 32 38 24 39 0.77

2 13 0.0064 30 4.2 0.0 37 49 50 66 40 67 0.62

3 13 0.036 1.7e+02 1.8 0.0 28 49 73 94 68 95 0.82

4 13 0.0024 11 5.5 0.0 30 49 99 122 96 123 0.72

5 13 0.026 1.2e+02 2.2 0.0 28 49 129 150 124 151 0.82

6 13 0.0074 35 4.0 0.0 33 49 162 178 157 179 0.69

7 13 0.026 1.2e+02 2.2 0.0 28 49 185 206 180 207 0.82

8 13 0.01 47 3.5 0.0 33 49 218 234 213 235 0.68

9 13 0.0094 44 3.6 3.0 18 49 261 290 250 291 0.85

10 13 0.23 1.1e+03 -0.8 0.0 32 49 301 318 297 319 0.70

11 13 0.021 97 2.5 0.0 29 49 326 346 324 347 0.85

12 13 0.11 5e+02 0.3 0.0 32 49 357 374 353 375 0.70

13 13 0.1 4.8e+02 0.3 0.0 30 49 379 402 376 403 0.71

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.027	1.2e+02	2.2	0.7	43	49	32	38	24	39	0.77
2	13	0.0064	30	4.2	0.0	37	49	50	66	40	67	0.62
3	13	0.036	1.7e+02	1.8	0.0	28	49	73	94	68	95	0.82
4	13	0.0024	11	5.5	0.0	30	49	99	122	96	123	0.72
5	13	0.026	1.2e+02	2.2	0.0	28	49	129	150	124	151	0.82
6	13	0.0074	35	4.0	0.0	33	49	162	178	157	179	0.69
7	13	0.026	1.2e+02	2.2	0.0	28	49	185	206	180	207	0.82
8	13	0.01	47	3.5	0.0	33	49	218	234	213	235	0.68
9	13	0.0094	44	3.6	3.0	18	49	261	290	250	291	0.85
10	13	0.23	1.1e+03	-0.8	0.0	32	49	301	318	297	319	0.70
11	13	0.021	97	2.5	0.0	29	49	326	346	324	347	0.85
12	13	0.11	5e+02	0.3	0.0	32	49	357	374	353	375	0.70
13	13	0.1	4.8e+02	0.3	0.0	30	49	379	402	376	403	0.71

Sequence Information

Coding Sequence: ATGTCCCGCGAGCGTGAGCCCCGTCACCGCACGGCTGGATCGTCAGCGTCCGTGCGTGCTCCACGCGGTGCCTGCAATGGAGAGAAGCGTCTGGAGTGCCCAGTGTGCGAGAAGCAGTTCGCCTTTAGAAGTCAACTAGAAACGCACCTTCGGACCCACACCGGGgggaagcctttcgagtgcccAGTTTGCAGGAAGAAGTTCAATCAAAGTGGAGATCTTACAAAGCACCTGcgcacccacaccggggagaagcctttcgagtgcacagtttgcaagaaGAAGTTCAATCAAAGTGGATATCTCAGAACGCAccttcgcacccacaccggggagaagcctttcgagtgcccAGTTTGCAGGAAGAAGTTCAATCAAAGTGGAGATCTTACAAAGCACCTGcgcacccacaccggggagaagcctttcgagtgcacagtgtgccagaagaagTTCAATGAAAGTGGAAGTCTCAGAACGCAccttcgcacccacaccggggagaagcctttcgagtgcccAGTTTGCAGGAAGAAGTTCAATCAAAGTGGAGATCTTACAAAGCACCTGcgcacccacaccggggagaagcctttcgagtgcacagtgtgccagaagaagTTCAATGAAAGTGGAAGTCTCAGAACGCAccttcgcacccacaccggggagaagcctttcgagtgcccAGTTTGCAAGAGGAAGTTCTCTGTAAGTGGTACTCTCAGAACACAccttcgcacccacaccggggagaagccttttgagtgcacagtttgcaggCAGAAGTGCACTCACAGTGCAGATCTCCGAAAGCACCTTCGCACCcacacaggggagaagcctttcgagtgcacagtttgccaGAAGAAGTTCACTGAAAGTGGAAGTCTCAGAAAGCACCTTCGctcccacaccggggagaagcctttcgagtgctcGGTTTGCAAAATGAAGTTCACTAAAAGTGGAAGTCTCAGAACGCACCTTCGCACCCACACcagggagaagcctttcgagtgcgcaGTTTGCAAGAGGAAGTTCTCTGTAAGTGGTACTCTCAGAGCACAccttcgcacccacaccggggagaagccttttgagtgcacagtttgcaacaagaagttcaatCAAAGTGGGTATCTCAGAACGCAccttcgcacccacaccggggagaggcctttcgagtgcacagtttgcaggCAAAAGTTCACTCTAAGTGGACATCTCAGAAAGCACCTTCTTACCCACACCgaggagaagcctttcgagtgcacagtttga
Protein Sequence: MSREREPRHRTAGSSASVRAPRGACNGEKRLECPVCEKQFAFRSQLETHLRTHTGGKPFECPVCRKKFNQSGDLTKHLRTHTGEKPFECTVCKKKFNQSGYLRTHLRTHTGEKPFECPVCRKKFNQSGDLTKHLRTHTGEKPFECTVCQKKFNESGSLRTHLRTHTGEKPFECPVCRKKFNQSGDLTKHLRTHTGEKPFECTVCQKKFNESGSLRTHLRTHTGEKPFECPVCKRKFSVSGTLRTHLRTHTGEKPFECTVCRQKCTHSADLRKHLRTHTGEKPFECTVCQKKFTESGSLRKHLRSHTGEKPFECSVCKMKFTKSGSLRTHLRTHTREKPFECAVCKRKFSVSGTLRAHLRTHTGEKPFECTVCNKKFNQSGYLRTHLRTHTGERPFECTVCRQKFTLSGHLRKHLLTHTEEKPFECTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01435653;
90% Identity: iTF_01435653;
80% Identity: iTF_01435653;