Tpal013126.1
Basic Information
- Insect
- Thrips palmi
- Gene Symbol
- -
- Assembly
- GCA_012932325.1
- Location
- NW:6618495-6624275[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.2e-09 1.6e-05 24.3 11.7 4 45 77 116 75 118 0.90 2 2 6.4e-05 0.13 11.8 11.0 5 35 244 281 242 291 0.78
Sequence Information
- Coding Sequence
- ATGACGGCCTCGTCCTCCGACGTGACGgagtcggcgacgacgagcggcgcgagcgacaACATGGACTGGTCGCAGGAATTCTACACGACGGCGCACAGGGCCGCCAAGAGTAGCGGCGAGGTCCAGCGTCGCTTCGCGGAGGGGACGTACCTGCAGGACACCGCCGCGTACGCCCTcctggccaaggccaagggcaccaagggcgccaagggcTCCAAGGTCAGGCGGTACTGCGTGCGCTGCCGGCTGCACGGCGCCCGCGTGGAGAGGCGGGGCCACACCTGCCCCCACGCCGCGTGCAcctgcgcgccgtgcaccAAGCACAACATCAAGAATACCGTCATGGTCGCTCGCCACAGGCTCTCATACAAGTCCAGGTGGGCAAAGTCTGAccacgacgccgtggaggccgtggcccccgtcgaggccgtggcccccgCCAAGGCCAAGACGCTGCCGAAGACCAAGAAGAAGGTCATTGGCACCAAGCTGTTCGGGACCTGGGGCCGAAAGCAGCGAGCATTGCATCGGCAGCGCCAACAGCGCGCTGTGCCGACCAAGAAGGCCAAGAAGGCCAAGAAGCCGACGCCCACGCGCTGCAGCAAGGCAGACAAAGCCACCAgcttcgcgccgccggggactgcggcggagacggagacggactGGACGGAGTCGCCACAGAACTTCCGCGCGCCCATCGGCACCTACCTGCACTCCGTCGGCCACCTGTgcaggcggtgctggcggcacggcgagacGTCGCGCTACTACTACAACAAGCAGGGCAGCGTCCTCCacagggcggcctgccggtggcGAGAGTGCGtctgcgcgctctgccgcgACGATGCGAGGCACCACATCATGGTGCGCTACCTGCAGGCCCAGGTGGAGGTACCGGTGGGCGCCTCCGCCGATCAGTGCCCCATCACGTTCGAGGTCTGCAAGTGGCGGCTGATGCGCGGCTCGCTCTTCGACGGCGTCCGCGACGCCACCTCGGACATGGCCACCGTACCGGGGCTctccgctgcgctgctgccgaTGCTGGAACGAGCGCATCTGGACGGGTCACCGgacagcggctccagcggcatgTCCGGCACGCACCAAGGGCCCGTGCTCCAGCTGGGCGGCCCGGGTGGCTcgcgcgacgccgacgacgccgacgacgccgcggccaacgccAACATCGAGGACTTCGTGACGGCGCTGAGACGCTGGGCCGCCAGGAAGGTCGGTTTGCCCTTcgacgagcaggccgccggACCTGCACAGCCTGCACGGGGAcactcccccgcggccgccgccctcaccgACCAGCAGCCCGAGGCCGTCAAATGCGAGCCCGACGTCAGCGACTTGCTGCGGGCAGCGGACCTGAAGCACGAGCCGTCGGTAAAGGTcgaggacgtggaggccgACATGAGAGGCCTCTCGGTGGCCGACGCCAACGACGAAAAGGTACTCGACTTGTCCAAGCCGTCACGGGCTGCTGCGCCCACCTtgccgggcctgggcggcctgggtgacgagaagccgccgccgccgatggccgaggccgaggcagccgcccCGGATCAGCGAGTGCTGGCGAGGCTGTCCATCTGCCTGGAGTGTGACACCGTGGTGGACACAGAGAGCCTGCTGACCGTACACTGCTGCAGGGTGGAAGTgaccccggcggccgcgagcaccgcgacgacgacggcgaaggCGACCGCGAAGAAGAGcacgaagacgacgacgaaggCGACCGCGAAGGCGACCGCAATGGCGACCGCgacggccatgccgccgccaccaccgccgcagcagcaaccGCGTCGGCGTCGACGTGCGCGCCGCAAGCTTGGGGACGCGAGCTCGAATTCTGCCACCAAGAcagccccctccacgcccagTGCCGGTGCTCCCGCCCAGTCCGTCATTGTGCACACATCGAACGTCGCACGCTCGTCTCCGCCCCGGGAGGACTCCCTGGACGGGCAGGTGCACAGGACCGCGGCCCGCATCGCCTGCGAGGACTGCGGCGACCTGGAGTTCCCCTCGCGgatggcgctgctggagcaccgcgtcgagcagCACGCCCGCCACCACCTGTCGTGGAccagccctcggcgcggccccgcgccctgcctgctgtgccccgccgcggcccacgtcCTCATGACCCCCCTGGAGCTGGACGAGCACACCCTcgaggcgcacggcggccagggcgccgtggcctgcccCAAGTGCTACTGCTGGCTGCGGGACTTCGACTCCGTCAGCGAGCACCTGCGGCTGCGGCACCGCCTGCCCGGCTCCTccatggcgccgccactggcgtGGGCGTGCTGCAGGGAGTGCGGCGCCGAGAAGCCCGACCTGCCCGCCATGCAGCTGCACCAGGAGCGCCACATGCGCGTGCTGCCGCTCTCGCGGCTCGAGTTCATGGCCTCGCTCATCCAGGAGGTGAGCTTGGCTCACAGACTGGACGCGCTCGACGCCATGAGCCCCGCTGTCCCCTGA
- Protein Sequence
- MTASSSDVTESATTSGASDNMDWSQEFYTTAHRAAKSSGEVQRRFAEGTYLQDTAAYALLAKAKGTKGAKGSKVRRYCVRCRLHGARVERRGHTCPHAACTCAPCTKHNIKNTVMVARHRLSYKSRWAKSDHDAVEAVAPVEAVAPAKAKTLPKTKKKVIGTKLFGTWGRKQRALHRQRQQRAVPTKKAKKAKKPTPTRCSKADKATSFAPPGTAAETETDWTESPQNFRAPIGTYLHSVGHLCRRCWRHGETSRYYYNKQGSVLHRAACRWRECVCALCRDDARHHIMVRYLQAQVEVPVGASADQCPITFEVCKWRLMRGSLFDGVRDATSDMATVPGLSAALLPMLERAHLDGSPDSGSSGMSGTHQGPVLQLGGPGGSRDADDADDAAANANIEDFVTALRRWAARKVGLPFDEQAAGPAQPARGHSPAAAALTDQQPEAVKCEPDVSDLLRAADLKHEPSVKVEDVEADMRGLSVADANDEKVLDLSKPSRAAAPTLPGLGGLGDEKPPPPMAEAEAAAPDQRVLARLSICLECDTVVDTESLLTVHCCRVEVTPAAASTATTTAKATAKKSTKTTTKATAKATAMATATAMPPPPPPQQQPRRRRRARRKLGDASSNSATKTAPSTPSAGAPAQSVIVHTSNVARSSPPREDSLDGQVHRTAARIACEDCGDLEFPSRMALLEHRVEQHARHHLSWTSPRRGPAPCLLCPAAAHVLMTPLELDEHTLEAHGGQGAVACPKCYCWLRDFDSVSEHLRLRHRLPGSSMAPPLAWACCRECGAEKPDLPAMQLHQERHMRVLPLSRLEFMASLIQEVSLAHRLDALDAMSPAVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -