Tpal013483.1
Basic Information
- Insect
- Thrips palmi
- Gene Symbol
- -
- Assembly
- GCA_012932325.1
- Location
- NW:5128649-5133620[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-10 3.9e-07 29.5 6.1 3 39 95 132 93 138 0.88 2 2 3.5e-05 0.07 12.7 9.6 4 36 223 254 221 264 0.84
Sequence Information
- Coding Sequence
- ATGGCGGCACTGGACGGAGATAGAGACAGGTGCCGCTCCAGTCAGCTGGCTGCAGCTGGTGCTGCCGGTGGGTCCAGGCGGGTCACGAGGCAAAGCGTTCACGAAAACACAAAACACGCTGACACACCTCGCCGTCTGAAACGTCGTCTGAAACAATTgagccggcgtcgccgtcgagaGCGCATCGCTTCGTCCGTCTGCACTGCGCGCGTCGCCAGCATGACATCCACGCCCGACGGGCACGACAGGCAACCGGCCATGACCACGTGTGGgagggccaccgccacctgccGCAAGTGCAAAGTGCACGGCGTGCTCTCgcccatggcgcgccaccggAAGGAGGGATGTGCGTTTGAGAGCTGCGACTGCCCCGGATGTGACATCATCACAAAGAGTCGCATCGAAAAGAGGATTTACTTCAAGCGATTTATGGAAAGCAAGGCTCGAGAGCGAGCTGCTGCCAGTCTCAGCAGCAACCAGACGACCAGCGGTCAGGCCGCCACAGCGGCCACAGCCCCagcagcgctgctgcaggaCCACTCTGAGCTCGCCGTCGTGCCCGTGCTGACGCTGtccgacgatgacgacgacgaggagcacgGGGACGGAACAGGCAGAGTGCCTCAGTTCGTGGTGACCGAGCGTACCCCGCTGGGGGTACTCAATTGCAAACTGTGTCGGCGGCACAACGCCCCGACCCACGTTAGCGGGAAGAGGTGCCCCTACGCCAACTGCATGTGCGGGTCCAAGTGCAAGGCCAAGGCTCGCCTCAAAGAGATCAAGCAGCGCTGGAGCATGGCCACTTTGGCCGAGCGGGGACTGCAGAATCCAGTgacccccgcctcgccagaAGGACTCCACACTCCAGATGCATCCGGAACGCAGCCAGGCGCCGAGGAGCGGGACGACAATGTTAGTGTCTTAGTGTCGACTTTGGCCGAGAACCCGCCCAACATCAACCTCTTGCCGCGACTCAGTGTTCTCAACATTGAGCAGTGCGCCGTGCGCATCGAGACTGTTACCGTCTCCCCATCAGAAGCGGAAACGGAGGATCCAACCTCCGACGCTGCACGGACCGACGCCCAAACATCCAGAATCTCAGCGGTATCGGACGAGACTGCTGTCGTGAAGGCTGCTGGAGAGATCATCGATCGGATTATTGAGACTTCTTTCGGAGAGACTGCCGGCGAGGTCATCGGGGAGGATGCTGTCGTGGAGACTGCCGTGGAAACTGCCGTTGAAACGAACACCTTTGAGAAGACTGCCGCACAGGAGACCGCCCCACAGGAGGCTTCCGTGGAGGAGACCGTCGTACAGGAGGATGCCGTTGGGGTTTCCGCCCTGGACCAGGCCATGCACAAGCTCTGCATCGAGTGCTCCGCACCGCTCGCCTCGGACATGGAGCTGCAAGACCACGTGGACACCGTCCACATGCGGCTGATCCCACTCTGTCGGTTGGCGCACCTCTTTGGCCGTATGCATGAGGTGATCTGGCCATGTGCCGAAGAGGCTGAAATagccgccggcgaggcgagagcCAAGTGTGTCTAG
- Protein Sequence
- MAALDGDRDRCRSSQLAAAGAAGGSRRVTRQSVHENTKHADTPRRLKRRLKQLSRRRRRERIASSVCTARVASMTSTPDGHDRQPAMTTCGRATATCRKCKVHGVLSPMARHRKEGCAFESCDCPGCDIITKSRIEKRIYFKRFMESKARERAAASLSSNQTTSGQAATAATAPAALLQDHSELAVVPVLTLSDDDDDEEHGDGTGRVPQFVVTERTPLGVLNCKLCRRHNAPTHVSGKRCPYANCMCGSKCKAKARLKEIKQRWSMATLAERGLQNPVTPASPEGLHTPDASGTQPGAEERDDNVSVLVSTLAENPPNINLLPRLSVLNIEQCAVRIETVTVSPSEAETEDPTSDAARTDAQTSRISAVSDETAVVKAAGEIIDRIIETSFGETAGEVIGEDAVVETAVETAVETNTFEKTAAQETAPQEASVEETVVQEDAVGVSALDQAMHKLCIECSAPLASDMELQDHVDTVHMRLIPLCRLAHLFGRMHEVIWPCAEEAEIAAGEARAKCV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -