Tpal013458.1
Basic Information
- Insect
- Thrips palmi
- Gene Symbol
- -
- Assembly
- GCA_012932325.1
- Location
- NW:10079867-10084385[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.2e-08 4.5e-05 22.9 6.5 4 36 11 44 9 52 0.90 2 3 7.3e-08 0.00015 21.3 11.1 2 38 133 170 132 179 0.89 3 3 3.2e-08 6.4e-05 22.4 7.6 3 35 213 246 212 255 0.90
Sequence Information
- Coding Sequence
- ATGAGAAGTAAATGTCAAAGTATGGCTAACTTTTGCACTTGGTGTTCCAATCATGGATTCTCAATAATATACAACTATAAGCACAAACTGATCTGCAAATATTTTAGATGCACTTGTTCTAAGTGTGAAGGTACCATTACATATCTAAGAAATGTCGCAATCCAAAGAGTATCTCAACAAAAGCAAGCTgcagaaagagaaaaatttgCTAAACGGCAAAGAGAAATTGAACGACAGAAAactgcaaaaaggaaaaaggatGCTAAACAACAGAACTTTCCTGCAAATCAAAATGCCGTGGAGAAGAAACGAATTTCTCGAAATGAAAAAAGCAGCTGGCAAAATAGTTCTGTCCGAACACAGTCAATCCCATCAACTTCCAGAGACCAATCTTCCCCACCTTACTGCAAGTTTTGCAGGAATCACGGCCTATCATATTACTTCATTGGGCAGCATTACAAATGCTGTAAATATTGGACCTGTTCCTGTCGCAAATGTCAAGATATCCGAGGCCCAGCAAAGTCTCGTGCAACCAAGGCTGCAGAGGGTTCTAAAAAGCGCAGTCGTAAAGAACGTAGTGAAAGTCCTGAAGGTTCTTCAAAACGCCTTTGTGTTGAAAATGTAGATCAGCCTTTACCCAACTGTCCATTGTGTCTTAACCATGGCTTTAGTTTCCCTTTGAAGGCACATCATATCAGCGTCTGCTTGCATAAAAACTGTTCATGTGATCCATGCCGTGATGAGCGGAAAAGCATGAAAGAGAAAGTTACACAAGTAGAAGAGAAAGAGGATAACAAATCAGAAGAAAGAGAAAATAATAAATCTGAAGGGAAAGAGAATATTAAATCTGAAGATAAGGAGAGTAATAAATTTAAAGATAAAGAAAATATTAAATCTCTAGAAGAAAAAAATCATAAATCTGATGATAAAGAAAATATCAAATCTACTGaacaaaaaaattgtaaaTCTGAAGATCAAGAAAACATCAAATCCACAGAAGAAAAGAATAATAAATCTGATGATAGGGAAAATATCAAATCTACTGAACAAAAAACTAATAAATCTGAAGATCAAGAAAATATCAAATCTACTGAAGAACAAAATATTAAATCTGAAGATAAAGAGAAGAATAGTATTGCAGTCAATTCTGTACACTCTGTGACTGCTCCAACTGCACCAACTGACATGAGGAAACCGTGTGCTGTGGTAGCACCAAAACCTAGGCTGTGTACTGCATCTTTTAGTTCCTCATCTTCATCTAAAGCTTATAACTACCAAGAAAATAAAGATGAAAATTTACCAAAGAAGAATGTAGACGTGCAAACTCTTAGTACCGCCGACTCCACAGCACCAGAAGGAAACTTAGGAGCTGAAAAAACTGCAAGCCCAGAAGAAGGGACTGCAGAGAAGAATAAATCAGAAAACATAGCTGATGCACGCAGTAAGAGTCCAGAAGTAAATGAGGATCAAAGAATCAATAACTCTCCTCTGCATGAAGAAGAGACAACTTCAGAAGGGGGTGCACCAGAGCTCATACCTGATGTCGAAAGTGAGCTTGCAGAAGTAAGTGAGATCCGATTAAGTCAAGGAACTAGCAACTCATCTGTGTATTCTGAGACTGTTGGGATGCCAGAGATTTTGGATGAAGAATACCACACGGTATCTGAAATCTCTGAGTCATCTAACGATGAGGGAAGCAACTTGAGTGCAGATGGTGAGGAAACAAGTACCAAAGTTACTGAGGCAATGGGAATGATGAGTAATGAGGGCGGTGATATGGTCATAGAGCCCAACATTGTTTCCCAGGCCAGTAATACTCTATCCGTTAAAAATAGTGCCCAAGACTCCTCATGTCCTGACAAATGCAAAGACCATGTGGAAGACCAAGTGGTTGAAGAAGAACCGAGCAAAAGTGATTCAATTGTAAGCAATATTGGAAAGGTTGGTGAAGGCTCTGAAGAGGAATCTAACGGCAGTCAAGCTATTATTTCTAAATCAACGGAGGACCTTTCAAACAACAGCCTTGAGTCTGAAGCAACACCAATACCATTCGCTGAAACAGGCCTTTCTGATCCAAGGCCAGAAATGGCTATTGAAGGAGATTCGACATCCATGGAAGCAAGGAAAGGCTATGACAGGGATAGCTGCAATGAAGGAACCAATGCCATCGAAACTACTCCATGTGTACCAATGAGTCCAACTCACAGTGCACCTCGACATATTTCCAACGAAGATAATATGTCGAGTAAGCTTTTCTCTGAAGTGTCTGAAATAAATGGCAGTTCTAATGTGGCTAGGGATACCAATTCACTGAGCTTTAACAGTTTAGAAAATAAAGACTGCGAGGAAAAAGCAGGTTACCAGGAATCCTGTTCACATCAAGAAACCACTATGGATGCATCaaaaaattcgactttgacatCGTGTCCTGAGAAGAAAGCTCCTGATGACATGGCCGATTTGATGGCAAAACTGGCTACTTTGGGAAAAAACTTGCAGAGTGCTTTGCCTCTTTCCCGATCTCTCAGCGTTCCCGCAAGTTTAGAGAGATCCCTGTTTGATGAAAGTCAGCCCTTTGATTTATCCTCTCATCTCCAGAAGAGCTTGTCCAATTCCCGTCATCAAGGAACACCTTCAAACACAATTCAGCCCGGAAGTGAATTGGTTCAAGAAAATGGCTCAGAGGGAATACCTATTGTATCCACGCCTGCATGTGCCGAAATGCGCCCGGAAAAGCCAAAAGAAACACCCCAAGAAGGTGCTGAGTCTCTCGAAAATCTTACTGAAAACGTTCAAGAAAATCCAGAGTTTTATCAGAAGCCGAGAGAAAACTCCCAAGAAGATCCAGATTTGTGCAGTAAGGAAACCGACAGCTCTGTTACTCCACCAGCACTTCATCTTGTGGAGGACGCAACTCTCCCTCAAGAAAGTACCAATGCTGAAGAGGTAACTATTTCTCCAGCAGAATTGCCCTCTGGAAATGTAGAGGTAAATTTACAGAAAGAATGTGATGGGTGTCACAAGGTCTTCTCTGCGTCAACTAATTTTAGAATTCATCAGTACCTTAAGCATGATGTGGACTGTGAGTCTAACCCTGGCACAATGTACCAGTGTAGAGAGTGTCCTTATGAAAATGAGAAAGAAATAGCTACTCTCGATCATGAGAGTAGTCACATGTCCCTTGTACCTTTGGACAGAATGCTAAAGTTATTTTGTGTCATTAGCAATGAGTATAAAAGAACTTAA
- Protein Sequence
- MRSKCQSMANFCTWCSNHGFSIIYNYKHKLICKYFRCTCSKCEGTITYLRNVAIQRVSQQKQAAEREKFAKRQREIERQKTAKRKKDAKQQNFPANQNAVEKKRISRNEKSSWQNSSVRTQSIPSTSRDQSSPPYCKFCRNHGLSYYFIGQHYKCCKYWTCSCRKCQDIRGPAKSRATKAAEGSKKRSRKERSESPEGSSKRLCVENVDQPLPNCPLCLNHGFSFPLKAHHISVCLHKNCSCDPCRDERKSMKEKVTQVEEKEDNKSEERENNKSEGKENIKSEDKESNKFKDKENIKSLEEKNHKSDDKENIKSTEQKNCKSEDQENIKSTEEKNNKSDDRENIKSTEQKTNKSEDQENIKSTEEQNIKSEDKEKNSIAVNSVHSVTAPTAPTDMRKPCAVVAPKPRLCTASFSSSSSSKAYNYQENKDENLPKKNVDVQTLSTADSTAPEGNLGAEKTASPEEGTAEKNKSENIADARSKSPEVNEDQRINNSPLHEEETTSEGGAPELIPDVESELAEVSEIRLSQGTSNSSVYSETVGMPEILDEEYHTVSEISESSNDEGSNLSADGEETSTKVTEAMGMMSNEGGDMVIEPNIVSQASNTLSVKNSAQDSSCPDKCKDHVEDQVVEEEPSKSDSIVSNIGKVGEGSEEESNGSQAIISKSTEDLSNNSLESEATPIPFAETGLSDPRPEMAIEGDSTSMEARKGYDRDSCNEGTNAIETTPCVPMSPTHSAPRHISNEDNMSSKLFSEVSEINGSSNVARDTNSLSFNSLENKDCEEKAGYQESCSHQETTMDASKNSTLTSCPEKKAPDDMADLMAKLATLGKNLQSALPLSRSLSVPASLERSLFDESQPFDLSSHLQKSLSNSRHQGTPSNTIQPGSELVQENGSEGIPIVSTPACAEMRPEKPKETPQEGAESLENLTENVQENPEFYQKPRENSQEDPDLCSKETDSSVTPPALHLVEDATLPQESTNAEEVTISPAELPSGNVEVNLQKECDGCHKVFSASTNFRIHQYLKHDVDCESNPGTMYQCRECPYENEKEIATLDHESSHMSLVPLDRMLKLFCVISNEYKRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -