Tpal009326.1
Basic Information
- Insect
- Thrips palmi
- Gene Symbol
- RCOR3
- Assembly
- GCA_012932325.1
- Location
- NW:7535513-7542176[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.2e-10 7.2e-07 28.9 0.0 3 46 130 173 128 173 0.97 2 2 8.6e-12 7.6e-09 35.2 0.0 3 46 382 425 381 425 0.97
Sequence Information
- Coding Sequence
- ATGGTTTTGGCTGAAAGGAACCCGGATAATGTTCGAAATGGAAAAAGATCTCGCGGCCCAAGTCCCAATGGTCATGCATCAGAGGGCTCCAGCATTGAAGAGGAAGCTGATGAACGTATTAGAGTTGGACGAGATTACCAAGCTATTGTGCCAGATCTAGTTCCTATTCAAGATCGGAAAGCAGAGTTGTCAGCTTTGCAAGATAGAGCCCTCCTTGTCTGGTCCCCCACACTAGACATACCCGATAGTAAATTGGATGATTATATTTCTCTTACCAAAGAGAGATATGGTTATAATGGTGAGCAAGCTTTGGGCATGCTATTTTGGCACAAACATGATTTAGAACGTGCTATTCTCGACCTCTCAAACTTCACACCTTTCCCTGATGAATGGACTGTTGAGGATAAGGTTCTTTTTGAGCAAGCTTTTCAGTTCCATGGGAAAAGCTTTCACCGCATTCGACAGATGCTGCCGGATAAATCAATTGCAAGTTTAGTTAAATACTATTACTCATGGAAGAAAACCCGCACTCGCATCAGTCTAATGGACCGTCAAGCTCGTAAAATGGCTTCTCACCGTGAGGATGGCAGTGAGGTTGGCTCTGAGGTTGGGTCCAACACTGATTCTGACTCTGAAGATAAGAAATGGACAATCCATCGCGGCATTCGCCGTAAGAGTGGTTCACCGCCAAGAACAACCCAAACGGAAGAAGCTGGGAGCATGAAAAAGGACAGCGAATCTGGGGGAAAGGGATCCTGTTCTAATTGTAACGTCACCTGCTCCCAAACTCACAGTACCCCTAAAGGAGTCATGTGCGCCACATGTCACGCCCACTGGACGCGAACTGGAAGCGTCAGACCGACAATGGGTCCTGCAAAGCCCCGCGATAGACAGTTTCATGTCTTGCTTCGTCACAAACGTAAGCCACCTCGTGGCATGTTCATTAATCATGATGATCTCACGGCTATGGCTAGTGGACCTGCCGGACAGGGTGAGCAAATGCTGAGGACAATGGATAGGGAGATTGTTTCATTGAAAAGACAGGTGCAAAATAACAAACAAGCAATAAGTGCAATGCGGGCTCGTACATCAAATGGTATTGATGATCTTCGTCCATCAGATTCTACAAATAGAATTAATGCTCGGTGGACCAATGATGAAATGCTGCTAGCTGTTCAAGGAATGCGGAAGTATGGCAAAGATTTTCAGGCTATATCTGAAATGATTGGAACTAAAACAGAGGCCCATTTGCGGAATTTCTTCACGAATCATCGACGCCGATTCAATCTAGATGCTGTTATGAAGGAATTCGAATCTGAGAATGGGCCAATAATTGAAAGTGAAACCAAAGATGACAAGATGGATGTTGATGTTGTAGAGCCAAGCAGTCCAACAATGAACTCCTCTCCAGTTTCCATTCAAACAAGCATTAACAATGTCAAGACAATGCTAAAAACAGCTGTGTCTGCAACTAAATAA
- Protein Sequence
- MVLAERNPDNVRNGKRSRGPSPNGHASEGSSIEEEADERIRVGRDYQAIVPDLVPIQDRKAELSALQDRALLVWSPTLDIPDSKLDDYISLTKERYGYNGEQALGMLFWHKHDLERAILDLSNFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRTRISLMDRQARKMASHREDGSEVGSEVGSNTDSDSEDKKWTIHRGIRRKSGSPPRTTQTEEAGSMKKDSESGGKGSCSNCNVTCSQTHSTPKGVMCATCHAHWTRTGSVRPTMGPAKPRDRQFHVLLRHKRKPPRGMFINHDDLTAMASGPAGQGEQMLRTMDREIVSLKRQVQNNKQAISAMRARTSNGIDDLRPSDSTNRINARWTNDEMLLAVQGMRKYGKDFQAISEMIGTKTEAHLRNFFTNHRRRFNLDAVMKEFESENGPIIESETKDDKMDVDVVEPSSPTMNSSPVSIQTSINNVKTMLKTAVSATK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00733054;
- 90% Identity
- iTF_00733054;
- 80% Identity
- -