Focc011341.1
Basic Information
- Insect
- Frankliniella occidentalis
- Gene Symbol
- RCOR3
- Assembly
- None
- Location
- ML763515.1:28304-34878[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-09 1.9e-06 27.7 0.0 3 46 130 173 128 173 0.97 2 2 3.8e-11 4.2e-08 33.1 0.0 3 45 382 424 381 425 0.96
Sequence Information
- Coding Sequence
- ATGGTTTTAGCGGAGCGAAACCCAGATAATGTTAGAAATGGAAAAAGATCCCGCGGACCTAGTCCCAATGGACATGCATCAGAGGACTCGAGCATAGAAGAGGAAGCTGATGAGAGGATCAGAGTTGGCCGAGACTATCAGGCTATCGCCCCAGACCTCATCCCCTTACAAGATCGCAAGGCTGAATTAACCGTTCTCCAAGATAGAGCTCTTCTTGTATGGTCCCCTACAGTGGACATTCCTGACAGTAAATTGGATGACTATATTTCTCTTGCCAAAGAGAGATATGGCTATAATGGAGAGCAAGCTTTGGGTATGCTTTTTTGGCACAAGCATGATTTGGAGCGAGCTATTCTTGATCTCTCAAATTTCACTCCTTTTCCTGATGAGTGGTCTGTTGAGGATAAAGTATTATTTGAGCAGGCCTTTCAGTTTCACGGCAAAAGCTTTCATCGAATTCGTCAAATGCTTCCAGATAAATCAATTGCTAGCTTAGTTAAATATTATTATTCATGGAAGAAGACCCGTACACGAACAAGTCTAATGGATAGACAGGCAAGAAAGCTGGCATCCCACAGGGAAGATGGTAGTGAAGGTGGCTCAGAGGTGGGGTCCAACACAGACTCTGACTCAGAGGAGAAGAAATGGACAATTCATCGCGGCATACGCCGCAGGAGTGGTTCACCCCCAAGAACAACCCAAGTGGAAGAAGCTGGGAGCATGAAAAAGGATGGAGAATCTAGTGGGAAAGGCTCATGTTCGAACTGTAGTGTGGCCTGTTCACAAACTCATAGCACACCTAAAGGTGTGATGTGCTCTACATGCTTTAATCATTGGACACGAACTGGAAATGTGCGACCAACAATGGGACCGGCCAAACCTCGAGACCGTCAGTTTCATGTACTTCTCCGTCACAAACGTAAACCCCCTCGTGGCATGTTTGTCAATCATGATGACTTGATAGCTATGGCCAGCGGACCTGCTGGTTTAGGTGAACAAATGCTACGGACCATGGACCGAGAGATTGTTTCCTTAAAAAGACAGGTTCAAAGCAACAAGCAGGCAATAAGTGCCAAGAGATCGCGAACATCAAATGGTATTGATGAATATCGCCCTTCTGATTCAACCAACAGGATTAATGCTCGCTGGACAAATGATGAGATGATGTTGGCCGTGCAAGGAATGCGAAAATATGGCAAGGACTTCCAGGCCATCTCAGAAATGATTGGCACTAAAACTGAAGCTCATCTTCGCAATTTCTTCACAAATCAACGCAGACGCTTTAATTTGGATGCTGTTTTGAAGGAGTTTGAGGCAGAGAATGGACCCATAATTGAGAATGAATCTAAAGATGACAAGatggaTGTTGATATTGTGGAGCCAAGTAGCCCCCCTATGAATTCTGCTCCTGTCTCAGTTCAAGCCAGCCTGAGTAACATTAAATCTATTCACAAAACAGCAGTTAGTGCCACTAAATAA
- Protein Sequence
- MVLAERNPDNVRNGKRSRGPSPNGHASEDSSIEEEADERIRVGRDYQAIAPDLIPLQDRKAELTVLQDRALLVWSPTVDIPDSKLDDYISLAKERYGYNGEQALGMLFWHKHDLERAILDLSNFTPFPDEWSVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRTRTSLMDRQARKLASHREDGSEGGSEVGSNTDSDSEEKKWTIHRGIRRRSGSPPRTTQVEEAGSMKKDGESSGKGSCSNCSVACSQTHSTPKGVMCSTCFNHWTRTGNVRPTMGPAKPRDRQFHVLLRHKRKPPRGMFVNHDDLIAMASGPAGLGEQMLRTMDREIVSLKRQVQSNKQAISAKRSRTSNGIDEYRPSDSTNRINARWTNDEMMLAVQGMRKYGKDFQAISEMIGTKTEAHLRNFFTNQRRRFNLDAVLKEFEAENGPIIENESKDDKMDVDIVEPSSPPMNSAPVSVQASLSNIKSIHKTAVSATK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01434884; iTF_00731424;
- 90% Identity
- iTF_01434884; iTF_00731424;
- 80% Identity
- -