Tpal003790.1
Basic Information
- Insect
- Thrips palmi
- Gene Symbol
- kn
- Assembly
- GCA_012932325.1
- Location
- NW:458298-494561[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-240 7.3e-237 787.0 0.4 43 457 11 423 5 427 0.95
Sequence Information
- Coding Sequence
- ATGCACCAGCCCGCGCCCGTGGACCACGGCAGCCTGGGGCTGAGTCGGGCGCACTTCGAGAAGCAGCCGCCCAGCAACCTGAGAAAGTCCAACTTCTTCCACTTCGTGATCGCCCTGTACGACCGGAGCGGCCAGCCCGTCGAGATCGAACGAACTGCCTTCATTGGTTTCATAGAGAAAGACCAGGTAGGCAATGAAGTCGACGAGACGAAAACAAACAACGGAATTCACTATAGGCTACAGCTGCTCTACGCCAATGGAGTCAGACAAGAACAGGACATCTACGTGCGGTTAATCGACGCAGTGACCAAACAGGCGATCGTCTACGAAGGCCAAGACAAGAACCCCGAAATGTGCCGAGTCCTCCTTACACACGAAGTCATGTGCAGTCGGTGTTGTGACAAGAAGAGCTGTGGAAATAGGAACGAAACGCCGTCCGACCCCGTCATCATAGACAGGTTCTTCCTCAAGTTCTTCCTGAAATGCAATCAAAACTGTCTCAAGAACGCCGGCAACCCGAGGGACATGCGGAGGTTCCAAGTGGTGATTTCGACGCAGGTGAGCGTGGACGGCCCCCTCCTGGCCGTCTCGGACAACATGTTCGTCCACAACAACTCCAAGCACGGTCGGCGCGCCAAGAGGCTGGACCCCTCTGACGGACTGTACCCTCCCCTGCCGGTGGCCACCCCCTGCATCAAGGCCAtcagccccgccgagggctggaccagtggcggcgccaccgtcatCATCATCGGCGAGAACTTCTTCGACGGCCTGCAGGTCGTGTTCGGGACCATGCTCGTCTGGAGCGAGCTGGTGACGTCCAACGCCATCCGGGTGCagacccctccccgccacatCCCGGGCGTCGTGGAAGTCACCCTCTCCTATAAATCAAAACAGTTCTGCAAGGGCGCCCCCGGCAGATTCGTCTACGTCTCCCTGAGCGAACCCACCATCGACTACGGCTTCCAGAGGCTGCAGAAACTCATACCCAGACACCCCGGCGACCCGGACAAGCTGCCCAAGgagATCATCTTGAAGCGggcggccgacctggccgaggcGCTGTACAGCATGCCCAGGAACAACCTGCcgctgtccgcgccgccgcggtcgcccacCAGCATGACCACCTCCAACGGCATgagcggcgtcggcggcgtcggcttcAACTCGTACTCCGGGCAGCTGGCCGTCAGCGTGCAGGACACCAGTGGACACGAAATGGGCAGCTTCTTCTCCACGTCGTTCTCCTCGATGAACCCCTTCACCCTCCAGACGTGA
- Protein Sequence
- MHQPAPVDHGSLGLSRAHFEKQPPSNLRKSNFFHFVIALYDRSGQPVEIERTAFIGFIEKDQVGNEVDETKTNNGIHYRLQLLYANGVRQEQDIYVRLIDAVTKQAIVYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVSVDGPLLAVSDNMFVHNNSKHGRRAKRLDPSDGLYPPLPVATPCIKAISPAEGWTSGGATVIIIGENFFDGLQVVFGTMLVWSELVTSNAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLSEPTIDYGFQRLQKLIPRHPGDPDKLPKEIILKRAADLAEALYSMPRNNLPLSAPPRSPTSMTTSNGMSGVGGVGFNSYSGQLAVSVQDTSGHEMGSFFSTSFSSMNPFTLQT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00732900; iTF_00732433; iTF_01434737; iTF_01566719; iTF_01566766;
- 90% Identity
- iTF_00732900;
- 80% Identity
- -