Tpal012891.1
Basic Information
- Insect
- Thrips palmi
- Gene Symbol
- osa
- Assembly
- GCA_012932325.1
- Location
- NW:4775595-4819805[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-25 2.8e-22 78.6 0.0 4 89 630 715 627 715 0.92
Sequence Information
- Coding Sequence
- ATGAGACCGACGCCCTCGCCCACAGGGTCCTCAGGAAGTCGGTCCATGTCCCCGGCAGTCGGCCAACAGAACATTCCAATGCCTCCACGCCCCTCAAGTGTCCAATCAGATGGTAGCGGTCCCACTCGCATGAGCTTGTCACCAATGGCCACTCAAGGCGGATATCAGCAGCCCctggcgcccccgccgcacaTACACGGGTACAAGATGGGGCACCCCGGCATGCcgcccgccatgccgcccagcTCGCAGCAAATGCCACCCTACTCgccgcagcagggccagcagtaCCCTCAAGGAGGCAGCTACAGTCCCCGGCCGCAGGGCAACATGCAGTACAGTCCGAACCAGAACTACGGGccgggcgctggcgggccgcaGAGCAACGCGTACCCCAGCAGGCCGATCCCCAACCACGTGCCGCACTCGCAGTTTGGATACCAGGGTTGGGGCGCGCCCGGACCGGGCATGAACCAGGGCCCTCCCCCCAACATGATGGcgggccctggccccggcaACCACGTCGCCGGCAAGAGCCCCAACAACGGGCCTCCCTCGGGGCCTCCCGGTCCCCAGGGTGGTCctccgggcagcgcgtcgtcgtccccgcagacgccgccgccacaaggccctcccgggccgcctggaccgccaggccccccaggcccttccagccagcccccggggcccgcggcgtcACCCGGCATGAGTCCGCACCCCGGCCCCAGGCCGCAcacgccgccccacggccacggGTCCCCTCACGGGCCGCCGCTCGCGGGGCCGCACGGACCGCACTACCTCAAGCAGCACCTACAGCACAAGATGGGGTTTGGCACCAGCCCCAGTCCAGGCCCTCCCGGAGGACCTCCTCAAGGGCCACCcgggggcccgccgggccctcctccaggccctccaggtccACAAGGTCCCGGTCAGGGTCCCCAAGGCTATGCCGGTCCCGGTGCGCCGGGTCCTGGTGGTcctccgggcggcccgggagcGCCCGGTCCCCAAGGCTCTGGCCCTCAGCACGGGTCGCCGATGGGACCACCGCTAGGACACCACCACCCTGGGCCCATGGGGCCACCCATGAGCTCGTCGAGTcctggcccgggcggcccgcctccgGGTGCACCGCCTGGCGCACCTCCACCGGGAGCGCCGTCACCTGTGTCGAACAGCCATGGGCCCCACCCTCACCACGACGGGCAGGGCCCGCCCATGGGGCACGGCCACCCTCCGGGGCACCCTCCGGGGCACCCTGCAGGGcccatgccgccgcccgcgtccACGCCTAACTCGCACGCGCCGCACTCCAtgtccagcgcgccgcactccATGGCGGACGGCGAGATGGTGCACGACAACGGCATcatgacgacggcggccggcacggcgacgaccaaCGTGAGCCCCGCCACGGCAAGTCAAggcgcgggccagggcggcgtgaCGTGCGTCGTGACGACGGGCCCCGACGGCGCGCCCATGGACGAGGCGTCGCAGCAGTCCACCCTGTCcaacgcgtcggcggcgtccggcgAGGAGTCGAGCAGCAGCAAGTCGCGGAAGGacgggccgctcggcctgTACCACAAccaccccgcctcggcggccagccccgtgggcggcgggcccgggaCGGtgccctcgcccggccccagcgccATGAACAGCCTCCACGACGACTACGAGATGGGCGGCCCGGGAGGACCTGGAGCTGGACCCGGAGCGCCCGGAACACCGGGAGGACCCAACAACTGGCCTCGAACCCCTGCCAGCCCGGTGTTTAACAGTCATGTTGGTGGGCCCGATCCATACAGATCAAAGAAACCAGACAGTTTGGGCAAACTTTACGACATGGATGACTCCAAAGAGCGTTGGATGTGGCTTGACAAACTGCTGCAGTTCATGGAGGAACGAGGATCTCCCATCCAGGCGTGTCCAACAATCTCCAAGAACCCCCTCGATCTCTTTAGACTATATTTTTATGTCAAGGAGAGAGGGGGTTTCATGGAGGTATGCAAGGTCACGAAAAACAAGACATGGAAGGACATTGCGGGTCTCCTGGGCATCGGCGCTTCATCGAGTGCGGCCTACACGTTACGGAAACACTACACCAAGAACTTGCTGCCTTACGAATGCCACTTCGACCGGGGAGGTATCGACCCTCAGCCCATCATCAACCAGGTGGAAGCGGGGACCAAGAAGAAGCCTGCCAAAACCGCCCCAGTGCCATCACCTGGTTCATCTAACTCTCAAGATTCATTTCCACCACCTGGTTCTGGAAGTACTTCAATGGATGGATACGGCAGCTATGGCTATCCGCCAAATGCAGGACCTGAGTATAATGCCCAGCGGCCACCTTCACAATCAAATGCTTCCAGCCCCCATCCAGGTGTGGGTGTGCCAAACCATGGTGCAGGTGATAACATTAGCGTTTCCAATCCATTTGATGATGGGGCCCCTGGTCAGGGCCCTGGTCAGAGATCCAATTCTTACGGACAACCTTTTGGACCCTCAGGCCCCACTCGCACTGGGCCCCAAGGTTACCAGGGTCAAGGAGGCTACCAGTATCCTGAGCAGTACAACAGAGGCCCTGAATACAACCAACAATATCCTCCTGGAGGCAATTTCCCAAGCAATCGACCTATGTACCCACCATTCGGCCCTGAGGGCGACAGGCCTCCTTACAATCAATCCCCAAGTAGTGGTCAAGGGGGTCCTCCAGGAACCCCAGGGTCTGACCCCTACAACCGGTACCAACCTCCTGGCTATCAGCCTAGACCTGGGTATCCACCTGCTCCCCCTTCCAGTCCGGGTACACCACAGCCTCCTGGCCAAGCTGGCGACTACTACAGACCTGATCAGCCCAGAAGGCATCCGGACTTTGCCAAGGATCAGCAGCCTTATCAACCCTTCAATCAGCAGAGACCTGCTATGTATGGTGGATGGCCCAACAACACACAGTACAGAGGACAGTACCCACCTCAAGCAGGCACCCAACCCAACTCACAACAATGGAATCAACCACCCCGGCCAGGAGCACCTCCAAGTAATCAGGCTAGTTCTGGCCAATGGCCGCAATCACCTTACCAACCCCCACAGAACTCACAGCAGCCTTGGGGACCCAACATGCCTCCTTCAGGTGTAGGACAGGGTTCTCCTCTGCGGCCACCACTGGGTCCTCATGCTCAGTATAGGCCTGACGGGAAACCAAGGCCAGCTATGCCAGGAGGACCTCCGCCTGGCATGAAGTTAATTAATTCCTTACAGATGCCCCAACCATCACAATCACCTGGTACAATGGGACGTATGAAGTCAGATTCAGCATTCCCACTGGACAGTGTGGAGGCCACAACACCAGTCCTGTACAAACGGAAGCGGTTGATGAGAGCCGATGTATGCCCTGTGGAAGCATGGCGGCTCATGATGAGCCTAAGGTCTGGGTTGTTAGCAGAAAGCTGTTGGGCCCTGGACACATTAAATATACTTCTATTTGATGATGTGTCTGTAGCATATTTTGGCTTACAACACATGCCTGGCTTACTAGATGTTCTTCTTGAACACTTCCGGAAAGCTTTAGACGATATGTTTGAATCATCACCTACTGGAGTAATAGCTAATAGGAAATGGTATGAAAAGTCATCTATAAAAGACCAAGATGTTGACCTTGGTAGTGTAATGGAACCCATAGATCCAAACGATAAAACGCAAATTTTATCGAGCACAATGCCAAATTATACTCTTGTTACACGCAAGGGTAAACCTGTCAGGATTGTAAACAGGGACAGTGAGGTGTTTATTTTGGACACAAAGAAGACTTGGGACGTTGAAGGGGAGGCCTCAGATTCCATGGTTGAAAGCGAAGCAGCTGCGGAAGCCCTTGCCACCAAGTACATTGTACCCTGTTTCCAAGCGGAATTCCACGCTGTACCTTTTGTACGGTTAATTCCTGACAAGATTAGCACAGGCCAAAGCCGGCCACCTTCACCTAAGACTGAACCTCAGGAAAGTGACTGTTCAGACAGTGCTCCCGCATGTAAAGAAGAAGTGCAACTTTCTATTACTGAAGGCTGTGTTAGTGAGAATAcaattgaaaagaaaaactgtgagaaaaagaaaaggacaaAAAGCTTGAGTGATGTGTTAAATAGAATTAAGAAAGAAAAGGAGGAGTTGCTTAGTGCCACAAAGCAGGATGCGTTGAGCAGGGACCTCAGTGCTAGTGTAAATGAACAGGGGGGTATCCAGGTCAAGAGAGAAGATCTGGGAGTAGGAAAAGCTAATAATAATAGGAGTGAAAATAGTAATGCCTTGTCCAAGGACTCAAATTTGGTGATAGAAGAAAATCATGTTAGTGAATCTTCGAAAGCGGACGGTGGTGATTCTGAGAATAAGTCTGATAACAGCGTACCAGTAACGGAAGTGAAGTTAGAGCCAATGGACGTGGACGAAGCGGAGAAGACTGCGCCCGCGAAAGCGGCTGCTGAGGTAGTGGCGGTCGAGGAGGAGCGGCCCTACATCAGGATAGGGGACTCGGAGAGCGTGGTGAAGCGGCGGCGCATGTCGGACTACGAGGACGAGTGCTACACCCGCGACGAGGCCAGCCTGTACCTCGTGACGGACACGCAGGACTCgatcgcgcggcgctgcgtgtgcCTGTCCAACATCCTGCGGAACTTGTCCTTCATCCCCGGCAACGAGATGGAGTTCGCCAAGAACCCCACGTtcctgggcctgctgggcaaGCTCATGCTCATCCACCACGAGCACCCGCTCCGGACGCAGCGCAACTACGAGCGCGAGGAGGACGCGGACTGCACGGacagctgcagcagcctctCGGGTGACGCCGAGTGGTGGTGGGACTTCCTGTTCCAGCTGCGCGAGAACGTGCTGGTGACCATGTCCAACATCGCGGGGCAGGTGGACCTGGGCCAGTACCCGGAGGAGGTGTCGCGGCCGCTGCtggacggcctgctgcactgggcggtgtgccccgcggcccacggccaggACCCGTTCCCCACCGTGGGGCCCAACTCGTCGCTGTCGCCGCAGCGgctggcgctggaggcgctgtgCAAGCTGTGCGTCATGGAGGCCAACGTGGACCTGGTgatcgccacgccgccctactcgcggctggagcggctctgCGCCGTGCTGACCAAGCTGCTGTGCCGCAGCGAGGAGCAGGTGCTGCGCGAGTTCGCCGTCAACCTGCTGCActacctggccgccgccgactcggGCATGGCGCGCaccgtggcgctgcagggcgcctGCGTGTCGCAGCTCGTGGCCTTCatcgagcaggccgagcaggtgGCGCTGGGCGTCGCCAACCAGCACGGCATCTCGGCGCTGCGGGACAACCCCGACGCCATGGGCACCAGCCTGGACATGCTGCGCAGAGCGGCGGGCACGCTGCTGCACCTGGCCAGGCACCCCGACAACAGGCCGCTGTTCCTGCAGCAGGAGCAGCGCCTGCTCGCCCTCGTCATGAGCCAGATCCTGGACCAGCAAGTGGCGGCGGTCGTGTCGAGCGTGCTGTTCCAGTGCTCCAGGACGcccgggcccgccaggccccacccgctgcccgccaacaccaccgtggccgcgacggcgccgtCATAG
- Protein Sequence
- MRPTPSPTGSSGSRSMSPAVGQQNIPMPPRPSSVQSDGSGPTRMSLSPMATQGGYQQPLAPPPHIHGYKMGHPGMPPAMPPSSQQMPPYSPQQGQQYPQGGSYSPRPQGNMQYSPNQNYGPGAGGPQSNAYPSRPIPNHVPHSQFGYQGWGAPGPGMNQGPPPNMMAGPGPGNHVAGKSPNNGPPSGPPGPQGGPPGSASSSPQTPPPQGPPGPPGPPGPPGPSSQPPGPAASPGMSPHPGPRPHTPPHGHGSPHGPPLAGPHGPHYLKQHLQHKMGFGTSPSPGPPGGPPQGPPGGPPGPPPGPPGPQGPGQGPQGYAGPGAPGPGGPPGGPGAPGPQGSGPQHGSPMGPPLGHHHPGPMGPPMSSSSPGPGGPPPGAPPGAPPPGAPSPVSNSHGPHPHHDGQGPPMGHGHPPGHPPGHPAGPMPPPASTPNSHAPHSMSSAPHSMADGEMVHDNGIMTTAAGTATTNVSPATASQGAGQGGVTCVVTTGPDGAPMDEASQQSTLSNASAASGEESSSSKSRKDGPLGLYHNHPASAASPVGGGPGTVPSPGPSAMNSLHDDYEMGGPGGPGAGPGAPGTPGGPNNWPRTPASPVFNSHVGGPDPYRSKKPDSLGKLYDMDDSKERWMWLDKLLQFMEERGSPIQACPTISKNPLDLFRLYFYVKERGGFMEVCKVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLPYECHFDRGGIDPQPIINQVEAGTKKKPAKTAPVPSPGSSNSQDSFPPPGSGSTSMDGYGSYGYPPNAGPEYNAQRPPSQSNASSPHPGVGVPNHGAGDNISVSNPFDDGAPGQGPGQRSNSYGQPFGPSGPTRTGPQGYQGQGGYQYPEQYNRGPEYNQQYPPGGNFPSNRPMYPPFGPEGDRPPYNQSPSSGQGGPPGTPGSDPYNRYQPPGYQPRPGYPPAPPSSPGTPQPPGQAGDYYRPDQPRRHPDFAKDQQPYQPFNQQRPAMYGGWPNNTQYRGQYPPQAGTQPNSQQWNQPPRPGAPPSNQASSGQWPQSPYQPPQNSQQPWGPNMPPSGVGQGSPLRPPLGPHAQYRPDGKPRPAMPGGPPPGMKLINSLQMPQPSQSPGTMGRMKSDSAFPLDSVEATTPVLYKRKRLMRADVCPVEAWRLMMSLRSGLLAESCWALDTLNILLFDDVSVAYFGLQHMPGLLDVLLEHFRKALDDMFESSPTGVIANRKWYEKSSIKDQDVDLGSVMEPIDPNDKTQILSSTMPNYTLVTRKGKPVRIVNRDSEVFILDTKKTWDVEGEASDSMVESEAAAEALATKYIVPCFQAEFHAVPFVRLIPDKISTGQSRPPSPKTEPQESDCSDSAPACKEEVQLSITEGCVSENTIEKKNCEKKKRTKSLSDVLNRIKKEKEELLSATKQDALSRDLSASVNEQGGIQVKREDLGVGKANNNRSENSNALSKDSNLVIEENHVSESSKADGGDSENKSDNSVPVTEVKLEPMDVDEAEKTAPAKAAAEVVAVEEERPYIRIGDSESVVKRRRMSDYEDECYTRDEASLYLVTDTQDSIARRCVCLSNILRNLSFIPGNEMEFAKNPTFLGLLGKLMLIHHEHPLRTQRNYEREEDADCTDSCSSLSGDAEWWWDFLFQLRENVLVTMSNIAGQVDLGQYPEEVSRPLLDGLLHWAVCPAAHGQDPFPTVGPNSSLSPQRLALEALCKLCVMEANVDLVIATPPYSRLERLCAVLTKLLCRSEEQVLREFAVNLLHYLAAADSGMARTVALQGACVSQLVAFIEQAEQVALGVANQHGISALRDNPDAMGTSLDMLRRAAGTLLHLARHPDNRPLFLQQEQRLLALVMSQILDQQVAAVVSSVLFQCSRTPGPARPHPLPANTTVAATAPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00732896;
- 90% Identity
- -
- 80% Identity
- -