Focc003497.1
Basic Information
- Insect
- Frankliniella occidentalis
- Gene Symbol
- osa
- Assembly
- None
- Location
- ML763241.1:96610-143291[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-25 1.7e-21 76.3 0.0 4 89 614 699 611 699 0.92 2 2 6 1.6e+04 -3.9 0.0 3 33 1156 1191 1156 1191 0.71
Sequence Information
- Coding Sequence
- ATGAGGCCCACCCCGTCGCCCACCGGGTCCTCAGGAAGTCGCTCCATGTCCCCGGCTGTTGGTGTCGGGCAACAGAACATTCCaatgccgccgcgcccttccaGCGTGCAGTCTGACAGCAGTGGCCCCACTCGCATGAGCCTGTCCCCGATGGCCGCCCAGGGTGGTTACCAgcagcccctggcgccgccgccgcacctgcacgcCGCCTACAAGATGGGGGGTCCGCACGCGGGCAtgccgcccagcgcccagcagaTGCCGCCCTACTCGCCCCAACAGGCGCAGCAGTACCCTCAAGGAGGCAGCTATAGTCCTAGACCTCAGGGCAACATGCAGTACAATCCGAACCAGAActacgggccgggcgccggcggccagcagggaggCGCCTATCCCAGCAGACCCATCCCGAACCACGTCCCACACTCGCAGTTTGGTTACCAAGGCTGGGGAGGTCCGGGCATGAACCAGGGCCCTCCTCCCAACATGATGGGCGGCCCTGGCAACCACGTGGCAGGCAAGAGCCCGAacgggccgccctcggggccaccggggccccAGGGTGGCGGCCCCCCGTCCGGCGCGCCCTCGGCGACGTCTCCACAGACGCCCCCACCTCAGGGCgctcccgggccgccggggcctcctggACCACCCGGCCCTCCTGGGCCGGCGCCGTCACCGGGCATGAGCCCCGGGCCACGGCCGCACACCCCTCCACAcggaggccccggcccccacgGGCCTCCAGGGCCGCACGGCGGGCCCCACGGACCCCCGCACCACGGGGGACCGCACTACCTcaagcagcacctgcagcacaaAATGGGGTtcggcagccccagccccggctcACCGGGAGGGCCACCTTCGGGACCACAAGGAGGGCCGTCGGCCGGACCGTCGCCTCCTCAGGGACCTGGAGGACCTCCACAAGGACCGCCCTACGGTGCTCCCGGCGGACCTGGTGGGCCCGGTGGTGCCTCtggagggcagcaggggcctcCTGGAGGTCCCCAGGTCAGTCAGGGGCCGCACCACGGTGGCCCTATGGGCCCCCCACCTGGCCATCACCACCCTATGGGACCGATGGGACCCATGGGCCCTCCTATGGGCTCgtccagcccggggccgggtggcCCTCCACCTGGCGCCCCACCGGGAGCACCCCTTGGTCCGGGTGCGCCCTCACCGGTGCCGAACAGCCACGGGCCGCACCCCCACCACGACGGACCCGGCGGACCCCACGGACCCCACGGCCCCATGCCACCGCCCGCGTCCACCCCCAACTCGCACGCCTCCATGCACCCCATGAGCTCGCACAGCGATGGCGAGATGGTGCACGACAACGGAATCATCACAACTGCAGCCGGAACGGCGACAACCAACGTGAGTCCCGCGACGACGGGTGCGGGtcccggtgcggggccgggctcggTGACGTCCGTAGTGACGACGGGGCCCGACGGCGCGCTCATGGATGAGGCCTCACAGCAGTCCACGCTGTCGAACGCCTCGGCCGCGTCGGGCGAGGacccgggcagcagcggtggccccACGCCCAAGCCGCGACCGGTCTATCACaaccaccccggcggccccggctcggcgccCAACGCGCCCTCGCCAGGGCCCAGCGCCATGAACAGCATGCACGAGGACTACGAgatgggcggccccggcggccctggtggcccgggggcggggcccaacAACTGGCCGCGGACTCCAGCGAGCCCGGTGTTTAACAGTCATGTCGGAGCCGATCCGTACAAATCGAAGAAACCGGATAGTTTGACTAAACTGTATGAAATGGATGACTCAAGAGATAGATGTCTCTGGCTCGACAAGCTTCTTCAGTTCAATGAGGAACGAGGCACTCCGATCCAGGCGTGTCCCCACATCTCCAAGAACCCCCTCGATCTCTATAGACTATATTTTTATgtcaaggagagagggggtttCATGGAGGTATGCAAGGTAACAAAGAACAAGACATGGAAAGACATTGCTGGTCTCCTGGGCATCGGAGCTTCATCCAGTGCTGCCTACACCTTACGGAAGCACtatacaaagaatttgttacCGTATGAATGTCACTTTGATAGAGGAGGAATGGACCCACAGCCTCTTATCAACCAAGTAGAAGCTGGGACCAAGAAAAAACCTGCAAAAGCTGCACCAGTGCCATCGCCAGGGTCGTCTAATTCTCAAGATTCCTTCCCAGCACCTGGTTCTGGAAGTGCTTCTATGGATGGATACAGTTATGGATATCCGCCCAACTCAGGACAGGACTACAATGCCCAGCGGCCACCATCTCAGACGAATGCTACCACTCCACATCCAGGTGTGGGTGTGCCAAATCATGGTGCAGGTGATAACGTTAGCGTTTCCAATCCATTTGATGATGGGGCCCCTGGTCAGGGCCAGAGATCCAATTCTTACGGACAACCTTATGGACCCTCGGGCCCGCCTCGCTCTGGGCCACAAGGTTACCAGGGTCAGGGCTACCAGTACCCTGAACAGTATGGCAGGGGTCCTGAGTACAATCAGCAGTATCCCCCAGGAAGCAATTTCCCGGGAAATCGGTCTATGTACCCTCCTTATGGTCCAGAGGGTGACAGGCCGCCTTATAACCAAACCCCTAGTGGTGCTCAAAGTGGTCCACCGGGAACTCCGGGCTCCGATCCCTACAGGTATCAGCCCCCAGGTTACCAACCCAGGCCAGGGTACCCTCAAGCACCTCCTTCAAGTCCAGGAACGCCTCAGCCACCAGGCCAAGGTGGGGATTATTATCGTCCTGACAGAAGACATCCTGACTTTAGCCAACCGAGGCCTCCTATGTATGCTGGGTGGCCTAACAACTCCCAGTACCGAGGCCAGTACCCTCCCCAGGGAGGTGCACAACCCAACTCACAACAGTGGAGTCAATCGCCCAGACCGGGTGCTCCTCCAAACAGCCAGGCTAGTTCGGGGCCATGGCCACAATCACCCTACCAgccaccacaccaaccaccTCAAAATTCTCAACAGCCTTGGGGACCCAACATGCCTCCTTCAGGTGTAGGTCAAAGTTCACCGTTGAGGCCACCATTAGGACCTCATGCACAATACAGACCCGATGGCAAGCCCAGACCACAAATTCCTGGTGTAACTCCTGGTGTTAAGATGCCCCAGCCATCACAATCACCTCTTCAGGTTGCCATGGGGCGCCTGAAGGCTGACTCTGCTTTCCCTCTCGATAGTGTGGAAGCAACAACACCAATTCTATACAAACGTAGACGACTGACCAGAGCAGATGTTTGCCCTGTAGAGGCATGGCGTCTAATGATGAGCCTCAGATCTGGCTTGTTAGCAGAGAGCTGCTGGGCCCTGGATACATTAAATATTCTTCTATTTGATGATGTGTCTGTTGCATACTTTGGTCTACAACATATGCCAGGCCTCCTGGATGTTCTTTTAGAGCACTTCCGTAAAGCTTTAGATGACATGTTTGAATCAGCAGGACAAACAACTAGAAAATGGTATGGAAAGACCCCACCCCtcaaggaggaagaagaaattGACCTTGGTAGTGTGGTTGAGCCCATTAATCCCAATGATAAAACCCAAATTTTATCtagcaaaatgccaaattacACTCTTGTTACTCGCAAGGGTAAACCTGTCAAGATTGTCAACAGGGATAGTGATGTGTTTATTTTGGACTCCAAGAAAACCTGGGATGTGGAAGGCGAGGCCTCTGACGCCATGGCTGAAAGCGATGCAACCGTTGAGGCTCTTGCTACCAAATATATTGTGCCCTGTTTCCAGGGAGAGTTCAACATTGTACCTTTTGCAAGGTTAATCCCTGACAAGAAGAGCACAGGCCAGGATCGGCCGAATTCACCTAAGACTGAACCTCAGAACAGTGTGAGTGTGGACTGTGCTCCAGCGTGTAAAGAAGAAGTTGTTCAACTTTCTACTCCCGAAGGCTGTGTTAGTGAGAATTCaagtgaaaagaaaaactgtgagaaaaagaaaaggacaaaAAGTTTGAGTGATGTGTTAAAtagaataaagaaagaaaaagaggaggagatgCTTAGTGCCACAAAGGATGCGTTGAGCAGGGACCTCAGTTCTAGTGTAAATGAGGATGGGGATGTGCAGGTCAAGAAAGAAGATCTGGGTGTAGTAGGGAAAGCAAATAGTAATAGGAGTGAAAATAGTAATGCCTTGTCCAAGGACTCAAAGATGGTGATAGAGGAAAATCATATTAGTGATTCTTCAAAACCTGACGAAGCAGCAGGGAAATCTGAGAATAAGTCTGATAAGAGCGTAACGGTAACGGAGGTGAAAGTAGAGCCAATGGAAGTAGATGATGAAGTCACAAAGACTACCGAGGCAACTGCGGAGGGAGCCAGCAAGACCACGGCGAGTGAGAAGGAGCCGGTGGCCGAGGCCACCGCACCCGCCGAGGAGTTGGTGGAGAGGCCCTACCTCAGAATACAGGACCCCGAGACGGTGGTGAAGCGGCGCCGCATGTCGGACTACGAGGACGAGTGCTACACGCGCGACGAGGCGAGTCTGTACCTGGTGACGGATACACAGGacgccgtggcgcgccgctgcgtcTGCCTCTCCAACATCCTGCGCAACCTGTCCTTCATCCCAGGCAACGAAATGGAGTTCGCCAAAAACCCGACCTTCCTCGGGCTGCTCGGCAAGCTGATGCTGATCCACCACGAGCACCCGCTGCGCACGCAGCGCAACTACGagcgcgaggaggacgccgactgcaccgacagctgcagcagcctggcgggcgACGCCGAGTGGTGGTGGGACTTCCTCTTCCAGCTGCGCGAGAACGTGCTCGTGACGATGGCCAACATCGCCGGCCAGGTGGACCTGGGCCAGTACCCGGAGGAGGtgtcgcggccgctgctcgaCGGGCTGCTGCACTGGGCAGTGTGTCCCGCCGCCCACGGCCAGGACCCCTTCCCCACCGTGGGGCCCAACTCGTCGCTGTCGCCGCAGCGGCTCGCGCTCGAGGCGCTGTGCAAGCTGTGCGTCATGGAGGCCAACGTGGACCTGGTGATCGCGACGCCGCCCTACTCGCGGCTCGAGCGGCTGTGCGCCGTGCTCACCAAGCTGCTCTGCCGCAGCGAAGAGCAGGTGCTGCGCGAGTTTGCCGTCAACCTGCTGCACTACCTGGCGGCCGCCGACACCGGCATGGCGCGCACTGTGGCCATGCAGGGCGCGTGTGTGTCGCAGCTGGTCGCCTTCatcgagcaggccgagcagagcgcgctgggcgtggccaACACCCACGGCATCACCGCGCTGCGCGACAACCCGGACGCCATGGGCACCAGCCTGGAcatgctgcggcgcgccgcgggcaccctgctgcacctcgcgcgCCACCCGGACAACCGGCCGCTGttcctgcagcaggagcagcgcctcCTCGCGCTCGTCATGAGCCAGATCCTGGACCAGCAGGTGGCGGCCGTCGTCAGCAGCGTGCTATTCCAGTgctcccgcacccccgccccagcgcggcccccgcccgctgccccggcaCCCAcgctcgcccccgcggccgcctccgcgtcGTCATAG
- Protein Sequence
- MRPTPSPTGSSGSRSMSPAVGVGQQNIPMPPRPSSVQSDSSGPTRMSLSPMAAQGGYQQPLAPPPHLHAAYKMGGPHAGMPPSAQQMPPYSPQQAQQYPQGGSYSPRPQGNMQYNPNQNYGPGAGGQQGGAYPSRPIPNHVPHSQFGYQGWGGPGMNQGPPPNMMGGPGNHVAGKSPNGPPSGPPGPQGGGPPSGAPSATSPQTPPPQGAPGPPGPPGPPGPPGPAPSPGMSPGPRPHTPPHGGPGPHGPPGPHGGPHGPPHHGGPHYLKQHLQHKMGFGSPSPGSPGGPPSGPQGGPSAGPSPPQGPGGPPQGPPYGAPGGPGGPGGASGGQQGPPGGPQVSQGPHHGGPMGPPPGHHHPMGPMGPMGPPMGSSSPGPGGPPPGAPPGAPLGPGAPSPVPNSHGPHPHHDGPGGPHGPHGPMPPPASTPNSHASMHPMSSHSDGEMVHDNGIITTAAGTATTNVSPATTGAGPGAGPGSVTSVVTTGPDGALMDEASQQSTLSNASAASGEDPGSSGGPTPKPRPVYHNHPGGPGSAPNAPSPGPSAMNSMHEDYEMGGPGGPGGPGAGPNNWPRTPASPVFNSHVGADPYKSKKPDSLTKLYEMDDSRDRCLWLDKLLQFNEERGTPIQACPHISKNPLDLYRLYFYVKERGGFMEVCKVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLPYECHFDRGGMDPQPLINQVEAGTKKKPAKAAPVPSPGSSNSQDSFPAPGSGSASMDGYSYGYPPNSGQDYNAQRPPSQTNATTPHPGVGVPNHGAGDNVSVSNPFDDGAPGQGQRSNSYGQPYGPSGPPRSGPQGYQGQGYQYPEQYGRGPEYNQQYPPGSNFPGNRSMYPPYGPEGDRPPYNQTPSGAQSGPPGTPGSDPYRYQPPGYQPRPGYPQAPPSSPGTPQPPGQGGDYYRPDRRHPDFSQPRPPMYAGWPNNSQYRGQYPPQGGAQPNSQQWSQSPRPGAPPNSQASSGPWPQSPYQPPHQPPQNSQQPWGPNMPPSGVGQSSPLRPPLGPHAQYRPDGKPRPQIPGVTPGVKMPQPSQSPLQVAMGRLKADSAFPLDSVEATTPILYKRRRLTRADVCPVEAWRLMMSLRSGLLAESCWALDTLNILLFDDVSVAYFGLQHMPGLLDVLLEHFRKALDDMFESAGQTTRKWYGKTPPLKEEEEIDLGSVVEPINPNDKTQILSSKMPNYTLVTRKGKPVKIVNRDSDVFILDSKKTWDVEGEASDAMAESDATVEALATKYIVPCFQGEFNIVPFARLIPDKKSTGQDRPNSPKTEPQNSVSVDCAPACKEEVVQLSTPEGCVSENSSEKKNCEKKKRTKSLSDVLNRIKKEKEEEMLSATKDALSRDLSSSVNEDGDVQVKKEDLGVVGKANSNRSENSNALSKDSKMVIEENHISDSSKPDEAAGKSENKSDKSVTVTEVKVEPMEVDDEVTKTTEATAEGASKTTASEKEPVAEATAPAEELVERPYLRIQDPETVVKRRRMSDYEDECYTRDEASLYLVTDTQDAVARRCVCLSNILRNLSFIPGNEMEFAKNPTFLGLLGKLMLIHHEHPLRTQRNYEREEDADCTDSCSSLAGDAEWWWDFLFQLRENVLVTMANIAGQVDLGQYPEEVSRPLLDGLLHWAVCPAAHGQDPFPTVGPNSSLSPQRLALEALCKLCVMEANVDLVIATPPYSRLERLCAVLTKLLCRSEEQVLREFAVNLLHYLAAADTGMARTVAMQGACVSQLVAFIEQAEQSALGVANTHGITALRDNPDAMGTSLDMLRRAAGTLLHLARHPDNRPLFLQQEQRLLALVMSQILDQQVAAVVSSVLFQCSRTPAPARPPPAAPAPTLAPAAASASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00731247; iTF_01434731;
- 90% Identity
- -
- 80% Identity
- -