Ttri014380.1
Basic Information
- Insect
- Therioaphis trifolii
- Gene Symbol
- -
- Assembly
- GCA_027580255.1
- Location
- CM050408.1:5257039-5297740[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2e-09 5.5e-05 24.0 33.4 4 261 2 253 1 258 0.53 2 3 0.00069 32 5.0 0.2 334 361 250 276 242 309 0.79 3 3 0.048 2.2e+03 -1.1 5.0 67 159 313 405 306 451 0.41
Sequence Information
- Coding Sequence
- ATGGAACGCGAAAAACAACGGGAAAAAGAAAGGCAGTCCAGACAGCAACAAGTTTCGGAGAACAACGTTAATGACAAGAAAGAACTATTCGGTTCTCCAGTAAAGGTGGACGACGCGAACGACGATGTGCAAAGTCAGATGATCCAGAGCCAGTTGGGCTCGTTCGCCGACGTGAAACCGTACTTGGACATGGTGTTCAGCTGCGGCGGCATGCCGCAGAGCCCCGCCCCCCAGCCGCTGCTGCAGCCGCAGTCGCAGTCGCAGTCGCAGTCGTCGTCCGGCCCGTCGTCCATGTCGTCGTCCGCGGCCGGCATGATGCAACAGCAACAGCACGTCCACCACTCGTCGTCGTCGTCGTCCTACCCCTCTGCGGCGGCCGCCGCGTCCAAGTCGCACCATCACGCCGCGGCCGTCGCCGTCGTCGGCCAACAGCAACAGCAGTCGTCGTCGTCCCGAAGGTCCGTGTCGCCCGCGTCCTCCGGCGGCGCCTCCGTACCCGCGGCCGTCGCGTCCTTCAAAAAGCCCGCCGTCACGTCGCACGCCATGGCCAGGTCGTCGTCGTCGTCGTCGTCGTCGTCCGCACACTTTCAGCCGCCCGCAAATCCGCCCAGAAGCAGTAACTTTTTAAAACCGGGTGAAATGAAACCGCCTTCGTATTCGTCGATGGGCCGGTCGACGAGCAGTAGCAGCATGAGAAGCCATTCTTCTCACCACAGGCCCACCACACACAAACCTAACCTTGCCATATCAAATAGTCATAATTCTAACGATACCAACACTCCCAGCACGATCGAAGACATTCTGAATGAAATGACCGTTGGTCTTCCGCTCGTGTCGGATATTGCGGAAACGCCGAGGGTCACGATTGTCGACTCCAAGTACACTGCTGACGGAAAGGTTGAACCACAGCAACGAATGAGCCCCAAAGACGCGTCGGAGAGTCTGAAGAAAATGCTCGGAGAGCCCGAACCGTTGTTCCCGGAACCGGTGCACAGGAACAACCAGCCGTTGTCGTCGTCGTCGCACGGCGTGGTGTCGCCCGACGCCGCGGCAGCCGCGTCCAACGCGGCGTCCGGCTCCGTCGCCGCCGCCGCAGCGGCAGCAGCAGCAGCAGCGGCGGCCGCGTCCTCCGTGCCAATGGACGCCAAACCGTCCGGACCGTACAACCGTTCGCTGTTCGCTTCATATATGGTTAAACCGTCTGTCAGAGGGTCCAACATAATTCCACAAACCCAACAGCCGCTGATGCAGGACTCGCAACAGCTGACGCTATCTCCGCAAACGGACAAGAGTCGCCGGAGCTCCACGTCGACCAACGTGATTTCGTCTGATCCGGCCACTGGTTcgtccaagtaa
- Protein Sequence
- MEREKQREKERQSRQQQVSENNVNDKKELFGSPVKVDDANDDVQSQMIQSQLGSFADVKPYLDMVFSCGGMPQSPAPQPLLQPQSQSQSQSSSGPSSMSSSAAGMMQQQQHVHHSSSSSSYPSAAAAASKSHHHAAAVAVVGQQQQQSSSSRRSVSPASSGGASVPAAVASFKKPAVTSHAMARSSSSSSSSSAHFQPPANPPRSSNFLKPGEMKPPSYSSMGRSTSSSSMRSHSSHHRPTTHKPNLAISNSHNSNDTNTPSTIEDILNEMTVGLPLVSDIAETPRVTIVDSKYTADGKVEPQQRMSPKDASESLKKMLGEPEPLFPEPVHRNNQPLSSSSHGVVSPDAAAAASNAASGSVAAAAAAAAAAAAAASSVPMDAKPSGPYNRSLFASYMVKPSVRGSNIIPQTQQPLMQDSQQLTLSPQTDKSRRSSTSTNVISSDPATGSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -