Tuni027792.1
Basic Information
- Insect
- Thereva unica
- Gene Symbol
- -
- Assembly
- GCA_949987705.1
- Location
- OX465281.1:219814346-219822059[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1.1 3e+02 4.1 0.8 2 23 215 237 214 237 0.96 2 19 3.8 1.1e+03 2.4 6.8 2 19 280 297 279 300 0.91 3 19 0.037 11 8.7 3.0 2 23 311 332 310 332 0.93 4 19 0.078 22 7.7 0.2 3 23 341 362 340 362 0.95 5 19 0.15 44 6.8 0.3 5 23 372 390 369 390 0.91 6 19 0.00042 0.12 14.8 2.6 1 23 396 418 396 419 0.96 7 19 2.6e-05 0.0075 18.7 2.4 1 23 425 447 425 447 0.98 8 19 0.0072 2.1 11.0 1.2 3 23 458 478 456 478 0.96 9 19 0.00035 0.1 15.1 0.6 1 23 495 517 495 517 0.98 10 19 0.025 7.1 9.3 1.1 1 23 523 545 523 545 0.98 11 19 0.022 6.2 9.5 1.4 1 23 561 586 561 586 0.95 12 19 0.0053 1.5 11.4 1.3 1 23 591 614 591 614 0.95 13 19 0.0027 0.78 12.3 0.5 1 23 619 642 619 643 0.94 14 19 0.018 5.1 9.7 3.0 1 23 647 670 647 670 0.97 15 19 1.2e-05 0.0035 19.7 1.0 1 23 673 696 673 696 0.98 16 19 0.028 8.2 9.1 4.5 1 23 702 725 702 725 0.89 17 19 3.4e-05 0.0096 18.3 0.3 1 23 731 753 731 753 0.98 18 19 2.9e-05 0.0083 18.5 0.9 1 23 759 781 759 781 0.94 19 19 0.01 2.9 10.5 0.1 1 23 787 811 787 811 0.97
Sequence Information
- Coding Sequence
- ATGCCCCCCAAACGTAAGAGAGGTCGTCCCAGGAAAACAAAGGGGCCGAATTGCATCCGATGCTTGGCCAGTTTGGAAAAGCCCTATCaattaatttttgatgaaaCTGGAATTGAACTTGAACTACAAAAACTTTTATCAGAATGTTTTAAATTGGATGTGGTTCATATAGAATCTGAGGAGCAAGCACTATGTGACGCATGCCTTAATGAATTAATAGATATTTATGACTTAATACAGAACGTTAAGGTGGAAAAGGAAGATAAACCAAAACAAATTTACGGCTCCAAGGTTGAACCATTGCCGACCGTTGCTGACGTTAAGAGTGAAGAAGAATCTGATGTTGATGTTACGGAAACGGAAGTTGCATTAAACGCTAAAGAAGCAATCAAGTTAAATAACTTGTCGGAAGAACAATGTGATAAAAACGAGTATAGGCTTGAAAATAACACACAAACGGAAGAAAATGAAGAATTAGGAAGAGATTCGGATGATGAAGCTGATCCGGGAGTTTACGACAACGAGCCAGAAGAATTTGAAGATGTCGACTATTTGGAAGACAATGATGAAATCAAGGATTTCAAAGCTTACAAAAAGAAAGTAATTCGAAGTAATTGTCAAGATATAACTTTCCCTACTATAGAATGTTGTATATGCTCTGCGGGACTAAGCACACATTTAAATGTTATTGAACATATAAAAACATCACACTGCGTTGAAGACTTCGCTTATCCTTGCATTGTGGACAGCAAGTGTGAACCATTGAAATCTTGTGATGATTTGGCATATCATCTAGTTTTTCAACATTATGATCTAAAAAACTTAACAATATATTGCTGTTGTCCGGAATGTAAAATGAATTTTAGCGATTTTCCATCATATAATAAGCATAATTGTTCCCGAAAAAGAGATACTTCTAGAATACAAACAGAGTGCGAAAATTGTGGAAAGAAGTTTAATTCAAATAAAAGATATCGATTTCATATGCAATTTCATTTGGAAAAACATCGCCCCAAAGCATGTTTCATTTGTGATAAGAATATAAGTAAAGAAAAGGATTTGTATGAACATTTAATGTATGGCCATGAAAAGGATCTTGATACAATATGTATTTTATGTGACAAGAAATTTGGAACtattgaaaattataaaaatcatgAAAGCTTACATAAAATACGGCGACCGTATAAGTGTAAATTTTGTGGGAAGACGTACCTTTACAAACAATTGTTGCAAGCACATATtCTTATACATCACAGCAATGGAAATCCTTTCAAATGTCATATTTGTGGAAAAGTCTTAATTAAAAAGACCTTCCTTAATAAACATATTCTAAGCCATCAACAGCCCAATCCGGAAGAAGTTTCTTGTTGCAATGTTTGTGGTTTTGTATTCGAGAACAATGCCTCAACTTCAgcACACTTAAAACAGCATAAAGGCATACCTGATGCCAATATTATCAGAGAAACGTTGGAAATAGCATATTGTTGTGAATATTGTGAAATGGCCTTCAACTCGATTGAGAATTTAGTTGCACATAGAGATACTCATGAAGATAAAACTATATTCTACTGTGATTTGTGTCCTTTAACTTacaatgaatataaaaaattggtTACACATAAATTAACGCACATAAACCATGCTGATAGAAGATCTAAATTCCCACTTATGAGACATTATGTTTGTGATAAACCGgGTTGTGATCTTACGTACTTGCAGTGGAGCAGTCTCAAATCACATAAAAGACATAAACATAGAATTGATGATTTCTTTTGCCCTAGATGTTCTGAACACTTTCAAGATGAGGATTCATACAAGATTCACATTCGTGATGATCATTCTGAAGGAGTATATGATTGTCAATTTTgcgacaaaatttttaaaactaaaatggCTGTCGCTGTACACGTAGCCAGGATTCACCACAAAAgcCGGTTTAAATGTAGCGAATgtactttaaattttcaaactgAAAAATGCCTCCAAGAACATAAGGAAACAGCGCATGCCCATTTTACATGTGACATTTGCGGCAAAatattaaagaataaaaaaaattacaacgtTCACAAAAGAATGGTTCATGATAAGGAACTTCGATTCTTTTGCACGTATTGCGAAAAAggcttttttaataaatgtgaCTTGACTGATCATGAACATGCTgtGCATGAAAAAATTAAGAGATATCAATGCAAACTTTGTGATTATTCTGCTGTTTATAAAGATTCCTTGACAATTCATATGCGTGCACATGAAAATGACAATCCTTATGTTTGCCAGCTCTGTGGTAAATCTTTTCGTAGGAAATATGGTTTAGTACTGCATGACAGACGACATCGAAATATTCGAGACTTTATTTGTCCCTACGGTTGTGGTTCATCTTATCCAAACCAAGGAATTCTAAATTCCCATATACGATCTAAACACCAAAATGACGGGAATAAGAGACGTAAACGGATTTCATTAAATAAACTCAAAAGACCTAGATTTGATGCTTTACAATCTTATCATTTCACTGACGATGATGATGGGTTAAACGATGATGACGTAGAATTAACAAAGAATAATGTTGAAGATAATCCAAATGAATTAAATGATGAAAGTCAACAATTTCAACTAAAGGAAGAGAATGAAGATGATCATGAAgagaaatatatacatacaaacgCTGATCTATTTATGGAGGAGGAGGATGATGATGGATTGAATAATGAGAATAACATGGAAATTCAAATAAACAATTATAATGAAGATGATCCTGATGGACCGGTTGAATATATTATTGAAGAAATACCAAATTTAATAGAAGATACAAATCAAATGGAAGCAGTAACTTTGGAGGAAAATCAATTTGATCATGAttatattcttaaaataaagccaaagaaaGAAATTAATCTAGGAAAATTTGAAGATCAATTAATTAGCGAAGTGCAACAATGA
- Protein Sequence
- MPPKRKRGRPRKTKGPNCIRCLASLEKPYQLIFDETGIELELQKLLSECFKLDVVHIESEEQALCDACLNELIDIYDLIQNVKVEKEDKPKQIYGSKVEPLPTVADVKSEEESDVDVTETEVALNAKEAIKLNNLSEEQCDKNEYRLENNTQTEENEELGRDSDDEADPGVYDNEPEEFEDVDYLEDNDEIKDFKAYKKKVIRSNCQDITFPTIECCICSAGLSTHLNVIEHIKTSHCVEDFAYPCIVDSKCEPLKSCDDLAYHLVFQHYDLKNLTIYCCCPECKMNFSDFPSYNKHNCSRKRDTSRIQTECENCGKKFNSNKRYRFHMQFHLEKHRPKACFICDKNISKEKDLYEHLMYGHEKDLDTICILCDKKFGTIENYKNHESLHKIRRPYKCKFCGKTYLYKQLLQAHILIHHSNGNPFKCHICGKVLIKKTFLNKHILSHQQPNPEEVSCCNVCGFVFENNASTSAHLKQHKGIPDANIIRETLEIAYCCEYCEMAFNSIENLVAHRDTHEDKTIFYCDLCPLTYNEYKKLVTHKLTHINHADRRSKFPLMRHYVCDKPGCDLTYLQWSSLKSHKRHKHRIDDFFCPRCSEHFQDEDSYKIHIRDDHSEGVYDCQFCDKIFKTKMAVAVHVARIHHKSRFKCSECTLNFQTEKCLQEHKETAHAHFTCDICGKILKNKKNYNVHKRMVHDKELRFFCTYCEKGFFNKCDLTDHEHAVHEKIKRYQCKLCDYSAVYKDSLTIHMRAHENDNPYVCQLCGKSFRRKYGLVLHDRRHRNIRDFICPYGCGSSYPNQGILNSHIRSKHQNDGNKRRKRISLNKLKRPRFDALQSYHFTDDDDGLNDDDVELTKNNVEDNPNELNDESQQFQLKEENEDDHEEKYIHTNADLFMEEEDDDGLNNENNMEIQINNYNEDDPDGPVEYIIEEIPNLIEDTNQMEAVTLEENQFDHDYILKIKPKKEINLGKFEDQLISEVQQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01431298;
- 90% Identity
- -
- 80% Identity
- -