Basic Information

Insect: Thereva unica
Gene Symbol: -
Assembly: GCA_949987705.1
Location: OX465285.1:11011907-11016555[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.065 19 8.0 0.0 1 23 123 145 123 145 0.95

2 19 0.0031 0.89 12.1 0.1 2 23 151 172 151 172 0.96

3 19 0.058 17 8.1 0.1 1 23 178 201 178 201 0.96

4 19 6.3e-06 0.0018 20.6 0.7 1 23 225 247 225 247 0.94

5 19 2.4e-05 0.0069 18.8 1.1 1 23 253 275 253 275 0.97

6 19 4e-06 0.0012 21.2 0.4 1 23 281 304 281 304 0.97

7 19 0.41 1.2e+02 5.5 4.7 1 23 315 338 315 338 0.93

8 19 4.3e-05 0.012 18.0 2.3 1 23 436 458 436 458 0.98

9 19 2.4e-05 0.0068 18.8 2.3 1 23 464 486 464 486 0.96

10 19 0.31 88 5.8 0.1 2 23 494 515 493 515 0.96

11 19 6e-06 0.0017 20.7 3.6 1 23 521 543 521 543 0.99

12 19 0.00037 0.11 15.0 3.2 1 23 580 602 580 602 0.93

13 19 0.00015 0.043 16.2 2.9 3 23 610 630 608 630 0.95

14 19 9.2e-06 0.0027 20.1 2.6 1 23 636 658 636 658 0.97

15 19 3.6e-05 0.01 18.2 3.6 1 23 664 686 664 686 0.98

16 19 6.5e-07 0.00019 23.7 1.0 1 23 827 849 827 849 0.97

17 19 2.2e-05 0.0064 18.9 1.0 1 23 855 877 855 877 0.99

18 19 2.1e-07 5.9e-05 25.3 0.2 3 23 886 906 884 906 0.96

19 19 0.00057 0.16 14.4 2.3 1 23 912 934 912 934 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.065	19	8.0	0.0	1	23	123	145	123	145	0.95
2	19	0.0031	0.89	12.1	0.1	2	23	151	172	151	172	0.96
3	19	0.058	17	8.1	0.1	1	23	178	201	178	201	0.96
4	19	6.3e-06	0.0018	20.6	0.7	1	23	225	247	225	247	0.94
5	19	2.4e-05	0.0069	18.8	1.1	1	23	253	275	253	275	0.97
6	19	4e-06	0.0012	21.2	0.4	1	23	281	304	281	304	0.97
7	19	0.41	1.2e+02	5.5	4.7	1	23	315	338	315	338	0.93
8	19	4.3e-05	0.012	18.0	2.3	1	23	436	458	436	458	0.98
9	19	2.4e-05	0.0068	18.8	2.3	1	23	464	486	464	486	0.96
10	19	0.31	88	5.8	0.1	2	23	494	515	493	515	0.96
11	19	6e-06	0.0017	20.7	3.6	1	23	521	543	521	543	0.99
12	19	0.00037	0.11	15.0	3.2	1	23	580	602	580	602	0.93
13	19	0.00015	0.043	16.2	2.9	3	23	610	630	608	630	0.95
14	19	9.2e-06	0.0027	20.1	2.6	1	23	636	658	636	658	0.97
15	19	3.6e-05	0.01	18.2	3.6	1	23	664	686	664	686	0.98
16	19	6.5e-07	0.00019	23.7	1.0	1	23	827	849	827	849	0.97
17	19	2.2e-05	0.0064	18.9	1.0	1	23	855	877	855	877	0.99
18	19	2.1e-07	5.9e-05	25.3	0.2	3	23	886	906	884	906	0.96
19	19	0.00057	0.16	14.4	2.3	1	23	912	934	912	934	0.93

Sequence Information

Coding Sequence: atggAGAACACTATTTTAAGTGAAAATCTTCGAATATTAAAGGAACCCCACCCAGACGACACTGGCCACAGCTTAAACAATCCCTTAGGGATTTGCAATTATATCGTAGAAATAGGAAATAACGAAGATACAATAACCAGCAGCAGTTATTATACAGAGGAGTTACCTATTAACACCGATATGCGATTGTCACCGCCTAAACAAATACGATTTGAAGCTCCAGTAATCCACAGCAAAACAAAGTCTAACACCGGAAAATAtattcaacaacaaaaactacacTGTTGTGATATGTGTGATTACAAAACTGAAGGCCTAAATGAGCTGAAATATCACAAGAAACATCTGCACACCTTCAGGAAACCATACCAATGTCCACTATGTAGTGCAGAATTTAACTTTGAGAAGAATGCATCTATCCACATCGCTGGCCATATGAGTACTCCAGCAACTTGTCCTGAGTGTGGACTTGTTTTTCAGAGAACATCTAGCTATTTAGGACATCTAGAAAATCACACTATAAACGATAATTTTGTATGTGGGATTTGTAATATTGAATTTCCTTTCGTTCAGTACTATGATCGTCACATAGAAAGAGCGCATAAAGATGGGGGTTTGTCTCAATCTAGGAAAAGGCATCTCGATTTAGATATTAGAAGAAAAATTGGGAAATATGCATGTAATACATGTGGAAAGAGGTTTACGAAGCCGAGTTTTCTTCGTAGGCATGAGATTGCACATTCTAATTTGAAACCTTTTGAGtgtagcgaatgCCTACAACGATTTACACAAAAAGCATCCTTACAGAGGCATCTTTTACAGCATGCTGGGTTGAAATCTTTTGAATGTCCACAATGTGAAATGAGATTTGCACAACGCACAAATCTTCAAACACACATAAACCGAGTTCATTCAACATCAGAAAAAGACATCATCAACAAATTCCCATGCAAGAAATGTCCGTGTGTCTTTAGCAAGTTAAACAGTCACAATCGCCACGTGAAACTAATGCATCCAAAATCCCTGATAATATCTGAAGATGATGAAGATTTCTCAATCAGCACAATTCTTACACAATTAAAAGATTTACAACAGCATTTACTACCACCAATCAAAGAAGTCAGTAGTAATCAGAAGGAAATAAATAATGCCGACGATTGCATAAGTGATGATATATCAAGCAGAAATGATGCGCctgaaattaattataatttaattaaaatcccTGATTATTCATCAAGTCAGAAGAATGACGAGATATTTCGATATGCTAAAGAAGTTTATACAGAAAATGatcaaaaattttatgaatGTTTAAGTTGTAGTAAGAAATTTCAAAGGAATTTCGATCTTTTGCGTCATATACGGACGCATACTAAAGAGAAGccgtttttatgtgaaatttgtGGAAGATGCTTTGCGCTTAAAACCACACTTCAATCACACTTGAAGACGCATAGAGATAAGTCGAATGTAATCGAGTGCTTGATTTGTTTGCAGGAATTTGATTCGTTAAGGGCGTTGGATCTTCATGCTAAAACACACGAGAACTACAAACCATATTCATGTACTAAGTGCTACAAACAATTCACATCAAGTAATAATTTACGAATACATTTACGAAGACACAGTGTGAAAGGACTTCAGGAAAAGGAATTACGAAAAATAATGCTACCTCCAATTAGTAATGATGACCAAAGTCTACCTGCAAAGACAATAAATAACGACGTAATGAAGCATCAGTGTTCAATATGTGGAATTAAATTTAAGAAGATCTCACACCTGAAACAGCATGAAGTAAATCACCTAGGATTTAAGACTCATTTGTGCCTTATATGCCAAAGATATTTCTCAACATCAAGTTCACTCAAACTACATCAAAAAATCCATATTGCTCACAAAACTTTTGAGTGTAAAATATGCAAGAAGACATTCATCAGAAATGGTGATTTTAAGCGCCACAGCCTAAAACACTCGAATGTAAGAAACTATTCTTGTCCATATTGTAAAAAGGCGTTCAAAAGTAAGGAGAACTGCCAAAGTCATATTCTAACACATTCaaaagatattttaaataatgaaaatcAACAAATTCAGTACGAATATGTTTTTCTAATGGATGACACTAATACTGATAATATAGATACACCACAGCAGCAGTGTTTAAATCAAGAGGACTCCGTGTTGTATCTTTATTTAGATAATCAAAATCAAACTGAATCTTTAGATAATAATGAAACAAACTCAAATACTAATATCAGTAAAGAAAAATCCTCGAAACGTGCCGAATTCATCGACATACGAGATATTCCAAACTATAAAAACAGATTATCTAAAAACATAATTGTAAAATCGCACGAAAAAACCTTAGAAACACAAGATACTAATCAACTACAAACAGAAATACAAGAATTCTTAATACATGGCAGCAATAAACCCTCGTCAACAACAATAGAACCACGAAAAAAGAAATCACAACATATTTGTGATGTATGCAACAGGCCGTTCAAGAAGCCAAGCGACTTAAAAAGACACATTTTAACACATACGAAAGAGCGACCATTTAAGTGTGATATTTGCTTGAAAACATTTAGTCTAAAATACACTCTAGAAGGACATCAGAGGATTCACGATAAGAATAGACAATCGATTAATTGTCAAGTATGTGGAAAGGCGTTTTCTACAAAAAGTGCTCTTAATATTCATTTAAGGATTCACACGGGAGAAAGGCCACATGAGTGTGAAATATGTGGGAAAACGTTTCGGACATCGGGGAATAAGAATTTTCATGTTAAGATGCATATGAAAGAAAGAGAGAATATgttaagaaagaagaagagataa
Protein Sequence: MENTILSENLRILKEPHPDDTGHSLNNPLGICNYIVEIGNNEDTITSSSYYTEELPINTDMRLSPPKQIRFEAPVIHSKTKSNTGKYIQQQKLHCCDMCDYKTEGLNELKYHKKHLHTFRKPYQCPLCSAEFNFEKNASIHIAGHMSTPATCPECGLVFQRTSSYLGHLENHTINDNFVCGICNIEFPFVQYYDRHIERAHKDGGLSQSRKRHLDLDIRRKIGKYACNTCGKRFTKPSFLRRHEIAHSNLKPFECSECLQRFTQKASLQRHLLQHAGLKSFECPQCEMRFAQRTNLQTHINRVHSTSEKDIINKFPCKKCPCVFSKLNSHNRHVKLMHPKSLIISEDDEDFSISTILTQLKDLQQHLLPPIKEVSSNQKEINNADDCISDDISSRNDAPEINYNLIKIPDYSSSQKNDEIFRYAKEVYTENDQKFYECLSCSKKFQRNFDLLRHIRTHTKEKPFLCEICGRCFALKTTLQSHLKTHRDKSNVIECLICLQEFDSLRALDLHAKTHENYKPYSCTKCYKQFTSSNNLRIHLRRHSVKGLQEKELRKIMLPPISNDDQSLPAKTINNDVMKHQCSICGIKFKKISHLKQHEVNHLGFKTHLCLICQRYFSTSSSLKLHQKIHIAHKTFECKICKKTFIRNGDFKRHSLKHSNVRNYSCPYCKKAFKSKENCQSHILTHSKDILNNENQQIQYEYVFLMDDTNTDNIDTPQQQCLNQEDSVLYLYLDNQNQTESLDNNETNSNTNISKEKSSKRAEFIDIRDIPNYKNRLSKNIIVKSHEKTLETQDTNQLQTEIQEFLIHGSNKPSSTTIEPRKKKSQHICDVCNRPFKKPSDLKRHILTHTKERPFKCDICLKTFSLKYTLEGHQRIHDKNRQSINCQVCGKAFSTKSALNIHLRIHTGERPHECEICGKTFRTSGNKNFHVKMHMKERENMLRKKKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01431248;
90% Identity: iTF_01431248;
80% Identity: -