Basic Information

Insect: Thereva nobilitata
Gene Symbol: -
Assembly: GCA_963855945.1
Location: OY979698.1:87101807-87106712[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.064 16 8.0 0.0 1 23 124 146 124 146 0.95

2 19 0.0019 0.47 12.7 0.1 2 23 152 173 152 173 0.96

3 19 0.1 25 7.3 0.1 1 23 179 202 179 202 0.96

4 19 6.2e-06 0.0015 20.6 0.7 1 23 226 248 226 248 0.94

5 19 1.6e-05 0.0039 19.3 1.1 1 23 254 276 254 276 0.97

6 19 3.9e-06 0.00096 21.2 0.4 1 23 282 305 282 305 0.97

7 19 0.4 97 5.5 4.7 1 23 316 339 316 339 0.93

8 19 4.2e-05 0.01 18.0 2.3 1 23 436 458 436 458 0.98

9 19 2.3e-05 0.0056 18.8 2.3 1 23 464 486 464 486 0.96

10 19 0.33 79 5.7 0.1 2 23 494 515 493 515 0.96

11 19 1.2e-05 0.0029 19.7 3.5 1 23 521 543 521 543 0.99

12 19 0.00037 0.089 15.0 3.2 1 23 580 602 580 602 0.93

13 19 0.00014 0.034 16.3 2.1 3 23 610 630 608 630 0.95

14 19 9e-06 0.0022 20.1 2.6 1 23 636 658 636 658 0.97

15 19 3.5e-05 0.0086 18.2 3.6 1 23 664 686 664 686 0.98

16 19 1.2e-06 0.00029 22.8 1.3 1 23 828 850 828 850 0.97

17 19 2.2e-05 0.0053 18.9 1.0 1 23 856 878 856 878 0.99

18 19 2.6e-07 6.4e-05 24.9 0.1 3 23 887 907 885 907 0.96

19 19 0.0074 1.8 10.9 4.1 1 23 913 935 913 935 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.064	16	8.0	0.0	1	23	124	146	124	146	0.95
2	19	0.0019	0.47	12.7	0.1	2	23	152	173	152	173	0.96
3	19	0.1	25	7.3	0.1	1	23	179	202	179	202	0.96
4	19	6.2e-06	0.0015	20.6	0.7	1	23	226	248	226	248	0.94
5	19	1.6e-05	0.0039	19.3	1.1	1	23	254	276	254	276	0.97
6	19	3.9e-06	0.00096	21.2	0.4	1	23	282	305	282	305	0.97
7	19	0.4	97	5.5	4.7	1	23	316	339	316	339	0.93
8	19	4.2e-05	0.01	18.0	2.3	1	23	436	458	436	458	0.98
9	19	2.3e-05	0.0056	18.8	2.3	1	23	464	486	464	486	0.96
10	19	0.33	79	5.7	0.1	2	23	494	515	493	515	0.96
11	19	1.2e-05	0.0029	19.7	3.5	1	23	521	543	521	543	0.99
12	19	0.00037	0.089	15.0	3.2	1	23	580	602	580	602	0.93
13	19	0.00014	0.034	16.3	2.1	3	23	610	630	608	630	0.95
14	19	9e-06	0.0022	20.1	2.6	1	23	636	658	636	658	0.97
15	19	3.5e-05	0.0086	18.2	3.6	1	23	664	686	664	686	0.98
16	19	1.2e-06	0.00029	22.8	1.3	1	23	828	850	828	850	0.97
17	19	2.2e-05	0.0053	18.9	1.0	1	23	856	878	856	878	0.99
18	19	2.6e-07	6.4e-05	24.9	0.1	3	23	887	907	885	907	0.96
19	19	0.0074	1.8	10.9	4.1	1	23	913	935	913	935	0.94

Sequence Information

Coding Sequence: atggaaaacaccATTTTAAGTGAAAATCTTCGAATATTAAAGGAACCCCACCCAGATGATACTGCACACAGCTTAAACAACCCTTTAGGGATTTGCAATTATATCGTAGAAATAGGAAATAATGAAGATACAATAACCAGCAGCAATTATTACACAGAAGAGTTACCGAATAAAAACACCGATATGAGGTTTTCACCGCCTAAACAAATACAATATGAAACACCAATAAtccacaacaaaacaaaatctaaggcagaaaaatatattcaacaacaaaaactgcACTGTTGTGATATGTGTGATTACAAAACTGAAGGCTTAAATGAGCTGAAATATCACAAGAAACATCTGCACAACTTCAGAAAACCATACCAATGTCCACTCTGTAGCGCAGAATTTAACTTTGAGAAGAACGCATCTATCCACATCGCTGGCCACATGAGTATTCCAGCAACTTGTCCCGAGTGTGGACTTGTTTTTCAAAGAACATCTAGCTATATAGGACACCTAGAAAATCATACTATAAACGATAATTTCGTATGTGGAGTTTGTAATATTGAATTTCCTTTCGTTCAGTACTATGATCGTCACATAGAAAGGGCCCATAAAGATGGAGGTTTGTCCCGAGCTAGGAAAAGACATCTCGATTTGGATATTAGAAGGAAAATTGGGAAATATGCATGTAATACATGTGGAAAACGGTTTACTAAGCCAAGTTTCCTTCGAAGGCATGAAATTGCACATTCTAATTTGAAACCTTTTGAGtgcAACGAATGTCTACAACGATTTACACAAAAAGCATCCTTACAGAGGCACCTTTTGCAGCATGCTGGATTAAAATCTTTTGAATGTCCACAATGTGAAATGAGATTTGCACAACGTACGAATCTTCAAACGCACATAAATCGAGTTCATTCAACATCAGAAAAAGACATCATTAACAAATTCCCATGCAAGAAATGCCCGTGTGTTTTTAGCAAGCTAAACAGTCACAATCGCCACGTAAAGTTAATGCATCCAAAATCCCTCATGATATCTGAAGATGATGAAGATTTCTCGATCAGCACAATTCTTACACAATTAAAAGATTTGCAACATCAATTACTACCACCACCAGTCAAAGAAGTTTGTAGTAATCAGAAGGAAATAAATAATGCAAACGAATGCAAAAATGATATACCAAGCAAAAATTCACCCCctgaaattaattataatttaattaaaattcctGATTATTCCAGTCAGAAGAATGAAGAAATATTTCGATATGCTAAAGAAGTTTATGCAGAAAATGATCAAAAATTCTACGAATGTTTAAGTTGtagcaagaaatttcaaaggaaCTTTGATCTTTTACGTCATATACGGACGCACACGAAAGAGAagccttttttatgtgaaatttgtGGAAGATGCTTTGCACTTAAAACCACACTTCAATCACACTTGAAGACTCATAGAGATAAAGCTAATGTAATCGAATGCATGATTTGTTTGCAGGAATTTGATTCTCTAAGGGCGTTGGATCTACATGCAAAAACACACGAGAACTACAAACCATATTCATGTACCAAATGCTACAAACAATTCAATTCAAGTAATAATTTACGAATACATTTACGAAGACACAGTTTGAAAGGACTTCAGGAAAAGGAATTACGTAAAATAATGCTCCCTCCAATTAGTAATGATGACCAAAGTCTACCTGCAAAGACAATAAAAAACGACATAATGAAACACCAATGTTCAATATGCggaatcaaatttaaaaaaatctctcaTCTAAAACAGCATGAAGTAAATCACCTTGGATTTAAGTCTCATTTATGCCTTATATGCCAAAGATATTTCTCAACGGCAAGTTCACTGAAACTTCATCAAAAAATTCATATTGGTCATAAAACTTTTGAatgtaaaatatgtaaaaagaCATTTATCAGAAATGGTGATTTTAAGCGCCACAGCTTAAAACACTCGAATGTAAGAAATTATTCTTGTCCATATTGTAAAAAGGCGTTTAAAAGTAAGGAAAATTGCCAAAGTCATATTCTAACACATTcaaaagatattttaaataatgaaaatcaACCAATTCAATACGAATATGTTTTTCTAATGGACGATACTAATGCTGATAATATAGATACGCCACAGCAGCAATGTTTAAATCAAGAGAATTCCGTGTTATATCTTTATTTAGATGATCAAAACCAAAATGAATCTTTAGATAATAATGAAACAAATTCAAATACtaataaaagtaaagaaaaatgcTCGAAACGTGCCGAGTTCATCGACATACGAGATATTCCAAACTACAAAAATCGATTATCTAAAAACATAATTGTAAAATCGCACGAAAAAACATTAGAAACACAAGATAATAATCAACTACAAACAGAAATACAAGAATTTTTAATACATGGTAGCAATAAATCCTCAACTACAGCAACAATAGAAACCCGgaagaaaaagtcacaacatATTTGTGATGTATGCAAGAGGCCGTTCAAGAAGCCAAGTGATTTAAAAAGGCATATCTTAACACATACGAAAGAGCGACCATTTAAATGTGATATTTGCTTAAAAACATTTAGTCTTAAATACACTCTAGAAGGACATCAAAGAATCCATGATAAAAATCGACAAGCTATTAATTGTCAAGTATGTGGAAAgccgttttctacaaaaagtgcTCTTAATATTCACTTAAGAATTCACACTGGAGAAAGGCCGCATAAATGTGAAATATGCACTAAAACATTTCGGACATCGGGCAATAAGAATTTTCATGTTAAAATGCATATGAAAGAAAGAGAAAATAtgttaagaaagaagaaaagataA
Protein Sequence: MENTILSENLRILKEPHPDDTAHSLNNPLGICNYIVEIGNNEDTITSSNYYTEELPNKNTDMRFSPPKQIQYETPIIHNKTKSKAEKYIQQQKLHCCDMCDYKTEGLNELKYHKKHLHNFRKPYQCPLCSAEFNFEKNASIHIAGHMSIPATCPECGLVFQRTSSYIGHLENHTINDNFVCGVCNIEFPFVQYYDRHIERAHKDGGLSRARKRHLDLDIRRKIGKYACNTCGKRFTKPSFLRRHEIAHSNLKPFECNECLQRFTQKASLQRHLLQHAGLKSFECPQCEMRFAQRTNLQTHINRVHSTSEKDIINKFPCKKCPCVFSKLNSHNRHVKLMHPKSLMISEDDEDFSISTILTQLKDLQHQLLPPPVKEVCSNQKEINNANECKNDIPSKNSPPEINYNLIKIPDYSSQKNEEIFRYAKEVYAENDQKFYECLSCSKKFQRNFDLLRHIRTHTKEKPFLCEICGRCFALKTTLQSHLKTHRDKANVIECMICLQEFDSLRALDLHAKTHENYKPYSCTKCYKQFNSSNNLRIHLRRHSLKGLQEKELRKIMLPPISNDDQSLPAKTIKNDIMKHQCSICGIKFKKISHLKQHEVNHLGFKSHLCLICQRYFSTASSLKLHQKIHIGHKTFECKICKKTFIRNGDFKRHSLKHSNVRNYSCPYCKKAFKSKENCQSHILTHSKDILNNENQPIQYEYVFLMDDTNADNIDTPQQQCLNQENSVLYLYLDDQNQNESLDNNETNSNTNKSKEKCSKRAEFIDIRDIPNYKNRLSKNIIVKSHEKTLETQDNNQLQTEIQEFLIHGSNKSSTTATIETRKKKSQHICDVCKRPFKKPSDLKRHILTHTKERPFKCDICLKTFSLKYTLEGHQRIHDKNRQAINCQVCGKPFSTKSALNIHLRIHTGERPHKCEICTKTFRTSGNKNFHVKMHMKERENMLRKKKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01432427;
90% Identity: iTF_01432427;
80% Identity: -