Tnob054781.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Thereva nobilitata
Gene Symbol
Hr39
Assembly
GCA_963855945.1
Location
OY979698.1:77297510-77306114[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.11 7.2e+03 -2.2 2.1 121 129 223 231 87 286 0.54
2 4 2.4e-11 1.5e-06 29.7 0.0 1 52 407 458 407 471 0.77
3 4 0.00092 58 4.7 0.1 77 137 459 517 438 530 0.70
4 4 4e-79 2.5e-74 252.9 0.4 199 408 528 730 513 730 0.95

Sequence Information

Coding Sequence
ATGGCAACACCCATTGGGGATGTGTCCCCAGTTGGGGCTAGCCCAAATGGTTCAATACTACCGGCAACAACAGCTATTGGCGGCACAACATCAACAGTACGCAATAATATTTCAGTAACAAACATAAAATGCGAAGAGAATGTTCGACCACCATCAGCGCCGGCTGCAACAGGCACATTATCAACGAACGGTCTTTGTggaaataatttctttaatgGCGGTATCCGGATTGCAGTACCGAAAGTCGAAGATTCTGATGAATCTGAATCGGAACTttccataattgaaaattcaaaagtCAATCGGAGATCAAACAGCACAAACAAGAATGGCCCTAGACCGATGTCATGGGAGGGCGAACTGTCggaggctgatgatattatggATACAGAAAATTCCGTTAGCAACGATAAGCAATTCGAAGATTCTCAAATGTCTACTAAAGATGACTCTAGACCATGCGAAGAAATTAAGCCCGAATATGATCAAATCTCTGTAGAGACAAATTCAGTTATATTTACATCAGGGTCAAAGAAGTTCACCAGTGATGTGATTAACTTAAAGTACGAACCGGGCTTATCAGATGCTACCGCAAGTGGTCTTAACTCTCCTCTGTTAGCCAGATCGAAAACAAATCTTCTTCCCGCCAATCCAAGTCCAGATTCAGCAATCCATTCCGTTTATACGCACAGTTCACCAAGCCAATCACCACTTACATCACGCCATGCACCATACACTCCATCACTTAGTCGAAATAATAGTGACGCCTCCCACAGTAGTTGTTACTCGTACAGTTCTGAATTTAGTCCAACACATTCACCAATTCAGGGTCGACATAATGTTTATGGAAACTTCAATGGCACTCTGCATCATCCAGTTCTATACCGACCTGTACTGGATAGTGATGGACAAGTAATTGGATCAGCAGCTCGTCGTCCTGACGAAGCATTGACCGAGAGCGATGCTATACCATCGGCAGGCATTTCTCGCCAGCAGCTTATTAACAGTCCATGTCCAATTTGCGGTGATAAAATTTCAGGATTCCATTATGGAATTTTCTCTTGTGAGTCCTGTAAGGGGTTCTTTAAAAGAACCGTACAAAACAGGAAGAACTATGTCTGTGTGCGTGGCGGGCCATGCCCTGTAACAATATCAACACGCAAAAAGTGCCCTGCGTGTAGATTTGATAAATGCCTTCAAAAGGGAATGAAACTTGAAGCAATAAGAGAGGACAGAACAAGAGGCGGAAGATCTACGTATCAGTGCTCCTACACCCTTCCAAATTCTATGCTTAGTCCATTAGTTAGTCCGGATGCTAATTGTAGCCAACAAAATCAGCGAGTTGGCCTCAATGGATGCATGATAAAAACGGAACAATCAGAAATTAGTAATGGTAGCAGCAATGGCAGTACAGGACTAAGTAGCCATCGCAATCATGTCCCACCTCTTCTTCAGGAAATCATGGATGTTGAACATTTATGGCAGTATAACGAGGGAGAATTATCACGACTGCAGCAACCGTCATCTGGTACTGATTCTAGTAATATAGCAGCAAATCCACTTTTAGCTAGTGCTGGCCTTTCATCAAACGGTGAAAATACTAATCCAGATTTAATTGCAAACTTATGTACTGTAGCTGATCATCGGCTGTACAAAATAGTAAAATGGTGTAAAAGTCTGCCACTTTTTAAACATATTTCGATCGATGATCAAATTTGTTTACTAATTAATTCCTGGTGTgaattacttttattttcttgttgCTTCAGATCGATAGCAACACCaggagaaataaaaatttcacagGGCAAATCAATAACACTTGCACAGGCGAAAACCAATGGTCTACAGGCCTGCATTGAAAGAATGCTTAACCTTACTGATCATCTAAGACGTTTAAGGGTAGATCGTTATGAGTATGTTGCCATGAAAGTAATCGTTCTGCTACAATCCGACACATCGGAGTTGCGAGAACCAGTTAAAGTACGAGAGAGCCAGGAGAAGGCATTGCAAGCGCTGCAAGCATATACATTAGCTCACTATCCTGATTCACCAGCAAAATTTGGTGAATTATTGTTAAGAATTCCAGAATTACAAAGAACGTGCCAGCTTGGAAAAGAAATGTTGACAATAAAATCCAGAGATGGCGAAGACTTCAACCTACTTATGGAATTACTGCGCGGGGAACATTGA
Protein Sequence
MATPIGDVSPVGASPNGSILPATTAIGGTTSTVRNNISVTNIKCEENVRPPSAPAATGTLSTNGLCGNNFFNGGIRIAVPKVEDSDESESELSIIENSKVNRRSNSTNKNGPRPMSWEGELSEADDIMDTENSVSNDKQFEDSQMSTKDDSRPCEEIKPEYDQISVETNSVIFTSGSKKFTSDVINLKYEPGLSDATASGLNSPLLARSKTNLLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHNVYGNFNGTLHHPVLYRPVLDSDGQVIGSAARRPDEALTESDAIPSAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCPVTISTRKKCPACRFDKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLSPLVSPDANCSQQNQRVGLNGCMIKTEQSEISNGSSNGSTGLSSHRNHVPPLLQEIMDVEHLWQYNEGELSRLQQPSSGTDSSNIAANPLLASAGLSSNGENTNPDLIANLCTVADHRLYKIVKWCKSLPLFKHISIDDQICLLINSWCELLLFSCCFRSIATPGEIKISQGKSITLAQAKTNGLQACIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTSELREPVKVRESQEKALQALQAYTLAHYPDSPAKFGELLLRIPELQRTCQLGKEMLTIKSRDGEDFNLLMELLRGEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00424727;
90% Identity
iTF_01431945;
80% Identity
iTF_01431004;