Tnob054771.1
Basic Information
- Insect
- Thereva nobilitata
- Gene Symbol
- sip1
- Assembly
- GCA_963855945.1
- Location
- OY979698.1:77019066-77024817[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.8e-92 3.1e-87 294.5 15.1 2 275 403 668 402 668 0.98 2 2 0.021 6.6e+02 1.5 0.1 245 270 683 708 672 714 0.83
Sequence Information
- Coding Sequence
- atgTCAGACAATGAATATGAGCGATTTGAAATAACTGATTACGATATAGAAAATGAATTTAATCCAAATAGAGGACGTCGAAGACAGACTAAACATCAACAGATTTAtgGAATTTGGGCTGATGATAGTGAAGCGGAAGAAGAGGAAGAGCTAACAGGAAGACGAGGTCGTGGTCGAAAACCTAAGGACTATTCGGCTCCTGTTAGCTTTGTTGCTGGCGGTATTCAACAGTCTGGGAAAAAATCCAAAGATGAAGATTTAGAGAATGATGATGATAATCAAATAACAGATGAAGAAGACGATGAGCGTCCGTCTTTCGGCAAAAAACCTATCAAAATAGATATATCATCTGAATCCTCTTCCGAATCTGAGAAAGAGTCTCGTCCTCCGCCAAAAACGAAAACACCAGGCTTTGGCAGTCGACAAAGTGGACCCTCTGGAATAACAAGATCAGGTTTAGCGACATGGGAAGTTCACACCAAGGGTATTGGTGCAAAACTTCTTCTTCAAATGGGCTATGAACCTGGAAAAGGTTTGGGTAAGGATTTGCAGGGCATATCTCGTCCTGTTGAGGCGCATATGAGAAAGGGACGAGGTGCTATTGGTGCGTATGGACCGGAAAAGGCTGCCGCTTTAGCTAAACAACAGCAGCTACAAGCTCAAGCAATTCAGGAGGATGAAAGAGACAACAAGGAATTTAAGGACAAAATGAACATGTGGAAAAAAGATGAAAAATCTGATAAGGACAAAAAGCGCCGTCATTACTACAGAAGTGTACAGGAGGTTATTGAAAAAGGAAAGCGAGCTGGAGCACTCGGCGACAAATTCAGCAATAAACTAAGTAATGTTCCTGTAATTGATATGACTGGTCCTGAACGGCGTGTTCTAAGCGGCTACCATGCCTTAAGTCAAGCCCGAATTGACgctgatgaagatatctatgaGCACAGACCCGCTAAGAAATGCACCAACTTTGCCCTTCCAGAACTTATGCACAACTTGAACTTAATTGTGGATATGTGTGAGCAAGAAATAATCGCCATCGATAAAGAAGACCGAGAGGCTGGCGATAAAAGTATTCAACTTCAACAGGAAGAAGAAAGTCTGAAGAAGATTGTGAAGCTTGAAAATGAATATATTTCCACCTTGGATAAGGCCTTAGAACTAGTAGAATCACTTACGGACTATCCAGAAACTTTAACACTGGCTAAAGCAGAACAGACCTTCGTGAAGCTTCAAACCGAATTCCCTGCTGAATATAAGGAATTTGGGCTAGGAGATTTGGCTGCCGGAGTAATAGCTCCGCTTGTTAATCAGAAATTTAGTGAGTGGAAGCCCTTGCAGGACCCAACTCGGTTTGttgatattattaaaaagtggAGAACTATTTTGGgaatGCATCAATCTGAGACTCGAAATGTCTTTGATCCGTATTCGTCCTTAATCTGGGCCGGAGTTATACCAAGCATTCGAAATGCAGCTGCCGTATGGAATCCAAAATGTCACCAGCAAATGGCAGCATTGCTAGATACTTGGGCACCTATGTTTCCTACTTGGATCCTTGATAATGTTCTCGAACAGCTGATTTTACCACAATTGACGGCGGCTGTTACTATTTGGGATCCTTTAACCGATACTGTTCCGATTCATGTGTGGATATTGCCTTGGAGTGGAATTTTGTCACATAAATTGGAGGAATTCATCTACCCTATGATTCGTGAAAAGCTAGGAAATGCCTTACAGGCTTGGGTACCCCAAGACAGATCTGCACGAGCTATGATAACACCATGGAAATCTGCATTCCCAGATGGTGAAATGCAGAGCTTCTTGCTAAAGTACATCATACCAAAGCTTCAAGTTAGCCTCTCAGAAATGGTCATAAATCCCTTACAGCAGGATTTAgaATTATGGAATCAAGTATGGGAATGGCATGAATTAATCTCACCACTTTTAATGGCACAGCTACTCGATAAATTCTTCTTCCCAAAATGGATGCAAACACTAGTCATTTGGTTAAATCAATCACCAAATTTAGATCAAATATCTCGTTGGTATACCGGATGGAAAAGTCTCCTATCCGAAGAACTACTACAGCAAATCAACACAAAAGAACATTTTCGTCGTGCTTTAGAGCTTATGCATCGTGCTACTGCAACAACAGGAATTTTAGAAACTACACCAATTGCACCGCAACCTCAACCACAAGCGACTGCTAATGTATTGCCCCAACCACCTGCTTTAATGGATCTACAAATAGAACCACCACCGCAATTGGAATTCAAGGATTTAGTTTCGCAGAGATGTGCTGATCGTGGTATTATTTTTGTACCAATGCCAGGTCGAAGAGAGTTTGGTAAACAGGTCTATAGGATTGGGAAGCTGTTTTGCTATATTGATCGATCGGTGCTTATGGTTAGTGATGGCAGTTTTAGCAGTTGGACTCCTACATCTTTGGGATTGATACTGGAGAGAGCGATCAGTGGATGA
- Protein Sequence
- MSDNEYERFEITDYDIENEFNPNRGRRRQTKHQQIYGIWADDSEAEEEEELTGRRGRGRKPKDYSAPVSFVAGGIQQSGKKSKDEDLENDDDNQITDEEDDERPSFGKKPIKIDISSESSSESEKESRPPPKTKTPGFGSRQSGPSGITRSGLATWEVHTKGIGAKLLLQMGYEPGKGLGKDLQGISRPVEAHMRKGRGAIGAYGPEKAAALAKQQQLQAQAIQEDERDNKEFKDKMNMWKKDEKSDKDKKRRHYYRSVQEVIEKGKRAGALGDKFSNKLSNVPVIDMTGPERRVLSGYHALSQARIDADEDIYEHRPAKKCTNFALPELMHNLNLIVDMCEQEIIAIDKEDREAGDKSIQLQQEEESLKKIVKLENEYISTLDKALELVESLTDYPETLTLAKAEQTFVKLQTEFPAEYKEFGLGDLAAGVIAPLVNQKFSEWKPLQDPTRFVDIIKKWRTILGMHQSETRNVFDPYSSLIWAGVIPSIRNAAAVWNPKCHQQMAALLDTWAPMFPTWILDNVLEQLILPQLTAAVTIWDPLTDTVPIHVWILPWSGILSHKLEEFIYPMIREKLGNALQAWVPQDRSARAMITPWKSAFPDGEMQSFLLKYIIPKLQVSLSEMVINPLQQDLELWNQVWEWHELISPLLMAQLLDKFFFPKWMQTLVIWLNQSPNLDQISRWYTGWKSLLSEELLQQINTKEHFRRALELMHRATATTGILETTPIAPQPQPQATANVLPQPPALMDLQIEPPPQLEFKDLVSQRCADRGIIFVPMPGRREFGKQVYRIGKLFCYIDRSVLMVSDGSFSSWTPTSLGLILERAISG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01431912;
- 90% Identity
- iTF_01431912;
- 80% Identity
- -