Tnob055694.1
Basic Information
- Insect
- Thereva nobilitata
- Gene Symbol
- lilli
- Assembly
- GCA_963855945.1
- Location
- OY979698.1:101120530-101121895[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.1e-07 0.045 14.8 0.2 12 119 8 115 2 143 0.66 2 2 1.4e-09 8.6e-05 23.8 7.4 349 465 200 303 186 311 0.65
Sequence Information
- Coding Sequence
- ATGGAAGATTATGAACGAATGGAAAGAAGAGAACGAGACAAACTTGCAAGACAGCAGGTACAGAGTCCAGATCCTGAAATATCACTTTTTCCTGCCCCAGTTcgtCTAAGTCCATCGGAAGGAGATCATCGTATTCAATCAAAATTGGGAGATTTTGCGATAGTTAAACCTTTAATTGAGCAAAAAGGTTTTATTGGTATTACAACTTCAGCAAGGAGGCAACCATCAACAGGAACTAGCTCGCCATCATTTTCCGGGAGTATACGAAATCCACCAATACAATACTATCATCAAAATCATCCTGTCCAATCACGAAGTGCTTACATGAAGCCAACTGATAGTAAAACAGCGTATAACGGGCGTGGGGGCTACCCAGGCCAGTCTGTTAAGCATGAAATCAGAACAAGTGGTATAGCCCCCATGAAAGCTCCGCCTCCTCAACCGCTTATCCCAAATGGCAGATCAAATGATAAACTTCCAGGACCTTCAAGTATACCAAATGGTCGCTTCCAACCTCCTCCGCCAAAGCCTCCAAAATTTCAAGAGCCGTTGGATGCGATATCATTGCCACCACCATCGTTACCATCAAATGGTGATGTTgagaatattttaaaagctatgaCTACTAGTTATACTCCATTGACTGAAATTGCAGCTACACCACGAAAAGAAGTGGAAGATAAATTTTCATTTGGCCAACCCAATCCACATAAgTATGCTGACTTCCCTCCGCCATTTAAAGCACCAAGTAATAAACGTATGGATTTGGAAAATGATCTTGATCTATCGGAAAGTGATGATGAACGTAAAAAGCAAACATCTGTTGAGCAGATATCACCAACAAATGATCCTTCAAGCGAGAGTTCTGAATCGGCATCTAGCGAATCAGGAAGCGAAGAATCAAATGGAACCAAAGGCGAAACTTCTAATCGTAagtaa
- Protein Sequence
- MEDYERMERRERDKLARQQVQSPDPEISLFPAPVRLSPSEGDHRIQSKLGDFAIVKPLIEQKGFIGITTSARRQPSTGTSSPSFSGSIRNPPIQYYHQNHPVQSRSAYMKPTDSKTAYNGRGGYPGQSVKHEIRTSGIAPMKAPPPQPLIPNGRSNDKLPGPSSIPNGRFQPPPPKPPKFQEPLDAISLPPPSLPSNGDVENILKAMTTSYTPLTEIAATPRKEVEDKFSFGQPNPHKYADFPPPFKAPSNKRMDLENDLDLSESDDERKKQTSVEQISPTNDPSSESSESASSESGSEESNGTKGETSNRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01431909;
- 90% Identity
- iTF_01431909;
- 80% Identity
- -