Tnob016622.1
Basic Information
- Insect
- Thereva nobilitata
- Gene Symbol
- TIGD6
- Assembly
- GCA_963855945.1
- Location
- OY979694.1:198571469-198573697[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.2e-09 4.4e-06 28.0 0.0 1 38 9 45 9 49 0.95
Sequence Information
- Coding Sequence
- AtgccaaataaaagaaaacaatattctAACGAAAATCTATTAAAAGCCTTAGAAGCAGTAGAAAATGGTATGTCCAAAAAACTGGCCTCGAAAACCTTTAATGTACCTAGAGGAACTATCCAGTCGCGATTAAGAAAGCCGTGCAAGAAGCTACCAGGCCCTGATCCAATATTGTCGAACGAAGAAGAGGAAGTTTTAGTAAAGTGGGTTTTAGATTGCTGTCGGAAAGGATTCCCAAAAAGAAAGACTGATTTACAATTGAGTGTAGCAAATTTCTTAAAGAAGACAGGAAGAGATAACCCCTTTAAAGATGACATACCTGGTAGAAAATGGTATGACCTTTTTATGCGCCGTCATCCAGAACTCAGCGAACGCACTGGCGAAGCTGTAACATCAGCCAGTGCTAATGTATCAGAAGAAGACATCAAAGGGTGGTTCCACAAAATTGAGTTTTATCTTAAAGAAAACAACTACTTTGACATTTTACAGAACCCGTCTCGTGTTTTTAATGGGGACGAATCTAACTTTCAGCTATGTCCCAAGAGTGGCAAAGTTATTTCATTACGAGGAGAAAGAGACGTGTATGAAGTTGATCACGCTGCAGCCAAAACGGCCCTTACTGTACTGTTTACGTTTTGCGCCAACGGAGATATTACACCTCCACTAGTTGTGTTTCCCAACAAGAGGCTTCCCAAGGATATAACATCATCAGTCCCAAGTGAGTGGGGCATTGGTTTAAGCGATACTGGCTGGATGAAATGTGAACTTTTCTATGATTATATCAAGAATGTATTTCATCCATaccttatcaaaaaaaaagtaacatttcccATCATACTATTTGTAGATGGGCACAAAACACATCTTAGTCTTGAAGTGAGTGAATTGTGCAGCAACTTGGAGATTATTTTGATTGCTCTATATCCCAACGCCACACGGATACTACAGCCAGCCGACGTGTCAGCCTTTAGACCTCTCAAATATGCATGGAAGGAAAGTGTCCTGAAATGGAGGAGAGATCACCCTTTGGAGACTCTCACAAAGAATAATTTTGTACCTGTTCTTAATGAGGCTTTAGAGGTTGGCGTCAAAGATGCAACAGTGATAAATGGATTCAGGACTACTGGCTTATGTCCCTGGAACTCTGAAGCCATCAACTATAAAAAATGTCTGGGTAAAGGAAGTAAACATGATGAAGAACCAAAAGAAGACAAATCAAAATTACAAGAAGATTGTAATGAAGATAGAGTTATGACACGTGAAACTGTAGAAAAGATTGTAGGGCAAGAAAAATTTACATATCTGCAAAGAGCGCCGCTTGAAAGTCTAACGGAAACAGAAAGGATTTTAAAGAagatttgttgttattttgatGATCAAACTGATGCGTCCACAATGTCCACATCCCAAGAAGCTGTTATCGAGTTTCTCAATATTGATCAATTTCCAGTAATATTAGCAGAAGATTTTGTAGATGAAATGCAAGCTATGAACACTGCAACAACGAATGAACCATCTACTAGCAATACTCAAGATTGTCTTGGGAGTGCGCAATTCTTATGTCTTGATAGTCAACAATATTTACTAACTCCAGTCAAATTACAGGATGTATTGATTACGGAAAGAACGCCTGAACGAAAAGGTGTTAAAAATGTAGAGAAATCACCATTCGTTCTTACTTCAGCTGAATGGCAAAAGACTGAAAACGACAAATTAAAAGCTAAGCAacttaaagaagaagaacaggTGACTCGTAAGAAGAACAGATTACtgaaacaagaagaaaaaaataaagcgaaagtagAAACCACTAGAAATAAGATAAACAAAAAAGCGAAAGATATAATAGCTACTAAAAAACAAGAGACAAAAGCTAATAAATTACAggagaaaaagcaaaacaaaatacaaGAGACATTTATTAATCACCACCATACAGTTGTTAATCACCAAGTTATGAATCATGATAACAATATGCCATCCTCTCCTGAAAATGAACACCCGTCTAACATTAAGAAAAGAAAAGCTGAAGAGCAGTCTATGTTTccaccaaataaaaaaatcaaaattctttCCGACATTGAACTGAATTTACCAAACGCATTCAGAACTTCGCAAGTTGGTAAAACAGATGACAACCAAAGTGACCCACTGCACAAAATAATCAACaataaaagaaagagaaattacTCTTTACTAGAACTAGAGAAGATACTTGCTGAGGATTAG
- Protein Sequence
- MPNKRKQYSNENLLKALEAVENGMSKKLASKTFNVPRGTIQSRLRKPCKKLPGPDPILSNEEEEVLVKWVLDCCRKGFPKRKTDLQLSVANFLKKTGRDNPFKDDIPGRKWYDLFMRRHPELSERTGEAVTSASANVSEEDIKGWFHKIEFYLKENNYFDILQNPSRVFNGDESNFQLCPKSGKVISLRGERDVYEVDHAAAKTALTVLFTFCANGDITPPLVVFPNKRLPKDITSSVPSEWGIGLSDTGWMKCELFYDYIKNVFHPYLIKKKVTFPIILFVDGHKTHLSLEVSELCSNLEIILIALYPNATRILQPADVSAFRPLKYAWKESVLKWRRDHPLETLTKNNFVPVLNEALEVGVKDATVINGFRTTGLCPWNSEAINYKKCLGKGSKHDEEPKEDKSKLQEDCNEDRVMTRETVEKIVGQEKFTYLQRAPLESLTETERILKKICCYFDDQTDASTMSTSQEAVIEFLNIDQFPVILAEDFVDEMQAMNTATTNEPSTSNTQDCLGSAQFLCLDSQQYLLTPVKLQDVLITERTPERKGVKNVEKSPFVLTSAEWQKTENDKLKAKQLKEEEQVTRKKNRLLKQEEKNKAKVETTRNKINKKAKDIIATKKQETKANKLQEKKQNKIQETFINHHHTVVNHQVMNHDNNMPSSPENEHPSNIKKRKAEEQSMFPPNKKIKILSDIELNLPNAFRTSQVGKTDDNQSDPLHKIINNKRKRNYSLLELEKILAED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00186114;
- 90% Identity
- iTF_00636327; iTF_01166625; iTF_01166626; iTF_00937223; iTF_01385675;
- 80% Identity
- -