Basic Information

Insect: Theretra japonica
Gene Symbol: stc
Assembly: GCA_033459515.1
Location: CM065943.1:5430225-5444222[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 2.2e+04 -4.3 1.6 15 19 452 456 451 456 0.81

2 13 0.047 5.2e+02 1.1 1.4 2 10 484 492 484 492 0.92

3 13 3.6e-05 0.39 11.1 18.1 4 19 500 515 498 515 0.93

4 13 1.3e-06 0.014 15.6 11.5 1 18 551 568 551 569 0.94

5 13 4.2e-05 0.46 10.8 16.1 1 19 610 628 610 628 0.99

6 13 9.5e-05 1 9.7 12.2 1 19 669 691 669 691 0.87

7 13 2 2.2e+04 -4.7 1.7 6 10 721 725 721 725 0.95

8 13 0.00073 8.1 6.9 7.4 1 11 731 741 731 742 0.95

9 13 0.16 1.7e+03 -0.6 0.6 4 10 746 752 745 752 0.92

10 13 9.9e-10 1.1e-05 25.6 12.8 1 19 758 776 758 776 0.99

11 13 0.00062 6.8 7.1 9.2 10 18 823 831 820 832 0.92

12 13 1.7e-07 0.0019 18.5 14.2 1 17 868 886 868 892 0.83

13 13 0.00015 1.7 9.1 5.5 1 13 898 909 898 910 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	2.2e+04	-4.3	1.6	15	19	452	456	451	456	0.81
2	13	0.047	5.2e+02	1.1	1.4	2	10	484	492	484	492	0.92
3	13	3.6e-05	0.39	11.1	18.1	4	19	500	515	498	515	0.93
4	13	1.3e-06	0.014	15.6	11.5	1	18	551	568	551	569	0.94
5	13	4.2e-05	0.46	10.8	16.1	1	19	610	628	610	628	0.99
6	13	9.5e-05	1	9.7	12.2	1	19	669	691	669	691	0.87
7	13	2	2.2e+04	-4.7	1.7	6	10	721	725	721	725	0.95
8	13	0.00073	8.1	6.9	7.4	1	11	731	741	731	742	0.95
9	13	0.16	1.7e+03	-0.6	0.6	4	10	746	752	745	752	0.92
10	13	9.9e-10	1.1e-05	25.6	12.8	1	19	758	776	758	776	0.99
11	13	0.00062	6.8	7.1	9.2	10	18	823	831	820	832	0.92
12	13	1.7e-07	0.0019	18.5	14.2	1	17	868	886	868	892	0.83
13	13	0.00015	1.7	9.1	5.5	1	13	898	909	898	910	0.95

Sequence Information

Coding Sequence: ATGTCACAGTGGAATAGCACATACGCTTACAACGGCCAGTATCAAGCTGGCAATGCGTGGAACGGTGATGTGAATGGTCAATATGTTAATCAACCATATTACCCTAATAGACCCGACTCCGGCGGACAGTATGTGAGCTTCAATGAATTTTTAACCCAAATGCAAACCAACAATGCTGCGCCCAACAACTCTCAGCATTACACCAATGTACCTTATGAAAATTATGCCTCAGCACAGTACAATTATCAAAACGTACCCTCCACATCGCAAGATCCACATTTAGAAAATTTCAACTATAGTACAAGCACTCCAAACATGCCTAATAATGTTGATCCCTCTTACCAAGTCAATGTACAAAGTCAGTACAATGTGAACCCCACATCCACAAgtgatatgatttttaaatctaatcTTACACCAACAGCCACTGAGTTTGTGCCTAAAAGTATGTTAAAATTGCCTTCAAGCAATCAAAATGTAACTGATGGGCCCAGCTCCAGCAACATTATACCAGAACATGTAAACAATCAGGGTAGCTCATCTGACACCAACTGGAGGGAAAGACCGCAAACCTCTCATAGAAATGGTGAAAAGAATGGTCGGGATACAGGAAACAGAACACCTAGAAACAATAGACACAATGATAGTTTAAGTCGGAACAGAGAGTCAAATTATAATGACAATAAGGGTAATGAATTGTCTCATGAAAACTCTAGAAGTAATGACTATAGGAGTAGAAACCATGACACAAACAACCGTAATTATGAAAATGCTCGTAACTATGACCCGGGCAACCACAGTCAAGATTCAAATTATCAGAATCCTGATAACAATAGGAGTTATAACTCAAGTGGTCGTAATGATAAAAAGGCACAATCAAAAACAAATGGCAAAGCAAGGGCCAAAGACTCAGATGCACGCACATTCTATAACAGTTCTGTGCCTAAAGATAGTCAAGATGTTAGAAATAATAGAAATGAAGGTTCTGGTAGACAAAAAAATTGGCCAGGCACACAACGAATGAGGGGTGTAGACAGACACAACACTGATGATGAACAGTATGCAAATACTTACCTTCATCAGAGAGATGATAAGGTAGACAGGGTAAAAGCAGAGAATATTCCTAGTCCTAtgaggtttaaaaataaaactgcagatcaagCACACAAAGAAATGACGCAGAGGGAAAGACTCTCAGAACAATTAGACAATGGCACATTAGAATGTTTGGTATGTTGTGAACGAGTGAAACAAATCGACCCAGTGTGGTGGTGTGGGAATTGTTACCATGTACTGCATCTGAAATGCATCAAGAAATGGGCTACAAGCAGTCTTGTAGaGGGTAAGTGGCGTTGTCCGGCGTGCCAGAACACGAATGACGCGATCCCCGGCGAGTACCGCTGCATGTGCGGCGCTGTGCGCGCGCCCGAGTACCACCGCGGCACGAGCGGCGCGCACACGTGCGGCAAGGCGTGCAAGCGGCCGCGCTCGTGCCCGCACCCCTGCACGCTGCTGTGCCACCCCGGACCCTGCCCGCCCTGCCAGGCCACTGTTCACAAGCAATGCGGGTGTGGCGTGGAGACGCGGTCGATCCTGTGCAGCAGCAAGTTGCCGCAGGTGTGCGGGCGCGTGTGCCAGCGCACGCTGCTGTGCACCGCGCACAAGTGCACCAAGGAGTGCCACGAAGGACCTTGCGACGTTTGCGCAGAAACTATCACGCAAACTTGCCTGTGCCCGGCGCGGCGGTCGCGCGTGGTGGCGTGCTCGGCGGAGACGGCGGGGCAGGAGTGGTTCCTGTGCGGCGGCGTGTGCGCGCGCGTGCTGGCGTGCGGCGCGCACGTGTGTCGCCAGCGCTGCCACGAGCCGCCCTGCCAGCCCTGCCCGCTGCTGCCCGACCTGGTGCAGGCCTGCCCCTGCGGCAAGATGAGggTACCGAAGGACCAACGAAAACTGTGCACAGATCCAGTTCCTCTATGTGGCAACATATGCGCTAAACCATTGGAGTGTGGACCTGCCGGGGACAGACACTTCTGCAAGAGCAAATGTCATCATGgcGATTGTAGTGTATGCCAGGATAAAACAGTTGTACAATGTCGGTGTGGCCATGCAAGCCGTGAAATACCCTGTGAGCTGCTAAAAGACTTGTCTGACAATGTGCTGTGCCAGAGGAAATGCAACAAGAAGCTATCGTGCGGGCGCCACAAGTGTCGGTCGGTGTGCTGCGTGTCGACGACGCACCGCTGCGGCGTGGTGTGCGGGCGCGCGCTGGCGTGCGGGCAGCACCGCTGCGAGGAGTTCTGCCACACGGGCCGCTGCGCGCCGTGCCCGCGCCTGGTGTTCGACGAGCTGCGCTGCGAGTGCGGCGCCGAGGTGCTGCTGCCGCCCgtggcgtgcggcgcgcgcccgccgccctgcGCCGCGCCctgccgccgcgcgcgcgcctgcCGCCACCCGCCGCACCACTCCTGCCACGTGGGGGACTGCCCGCCCTGCGTCGTGCTCACCACCAAGCGCTGCCACGGGAACCACGAGGAGCGTAAAACTATTCCTTGTTCACAAGAAGAGTTTTCATGCGGCCTACCTTGCGGGAAACCACTGCCTTGCGGCAAACATAACTGCATCAAAACATGTCATAAAGGCCCTTGTGATACCGGAAAATGCACGCAGCCGTGCACGGAGAAGCGCTTGGGGTGCGGGCACCCGTGCGCGGCGCCGTGCCACGTGGGCGCGGCGGAGGGCAGCGCGGCGGCCGCGTGCCCCAGCTCCGCGCCGTGCCGCCGCCTCGTGCGCGCCACCTGCGCCTGCGGCCGCCGCGAGCAGGAGCGCGCCTGCTGCGACAACACGCGCGACTACGACCGGATGGTGAGTGCACTCGCCGCGACCAAAATCCAGGATGGTGGTTCCGTCGACTTGGCTGACGTGCATCGACCAGCCAACATCCTTAAAACGCTGGAGTGCGAGGAGGAGTGTCGCGCGGAAGCGCGCGCACGGCGGCTGGCGCTGGCGCTGCAGCTGCGTAACCCCGACGTGTCCAGCAAGCTGGCGCCGCGCTACAGCGAGCACGTGCGCGCCACGGCGCAGCGCGAGCCCGCCTTCGCGCTGCACGTGCACGACAAGCTCACCGAGCTGGTGCAGCTCGCCAAGAAGtCAAAACAGAAGACGCGTTCTCACTCATTCCCGTCGATGAACTGGCAGAAGCGTCAGTTCATCCACGAGATGTGCGAGCACTTCGGCTGCGAGAGCGTGGCCTACGACGCGGAGCCCAACCGCAACGTCGTCGCCACCGCCGACCGGGAGAAGTCGTGGCTGCCGGCCATGAGCGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGCCGCGTGCCGCCGCCCGTGctgcgcgcgcccgccgccgcgcccagcAACACCGCCGCCAAATCGTCAGGGGGCGGCTGGGCGACGCTGACGTCCACGAACGCGTGGGCGGCTCGCAGCCAGCCGAAGCCACCACCGACCAGCTCCGAGTCCAAAATCGACTACTTCGACAACCCGCCCGACAACTAG
Protein Sequence: MSQWNSTYAYNGQYQAGNAWNGDVNGQYVNQPYYPNRPDSGGQYVSFNEFLTQMQTNNAAPNNSQHYTNVPYENYASAQYNYQNVPSTSQDPHLENFNYSTSTPNMPNNVDPSYQVNVQSQYNVNPTSTSDMIFKSNLTPTATEFVPKSMLKLPSSNQNVTDGPSSSNIIPEHVNNQGSSSDTNWRERPQTSHRNGEKNGRDTGNRTPRNNRHNDSLSRNRESNYNDNKGNELSHENSRSNDYRSRNHDTNNRNYENARNYDPGNHSQDSNYQNPDNNRSYNSSGRNDKKAQSKTNGKARAKDSDARTFYNSSVPKDSQDVRNNRNEGSGRQKNWPGTQRMRGVDRHNTDDEQYANTYLHQRDDKVDRVKAENIPSPMRFKNKTADQAHKEMTQRERLSEQLDNGTLECLVCCERVKQIDPVWWCGNCYHVLHLKCIKKWATSSLVEGKWRCPACQNTNDAIPGEYRCMCGAVRAPEYHRGTSGAHTCGKACKRPRSCPHPCTLLCHPGPCPPCQATVHKQCGCGVETRSILCSSKLPQVCGRVCQRTLLCTAHKCTKECHEGPCDVCAETITQTCLCPARRSRVVACSAETAGQEWFLCGGVCARVLACGAHVCRQRCHEPPCQPCPLLPDLVQACPCGKMRVPKDQRKLCTDPVPLCGNICAKPLECGPAGDRHFCKSKCHHGDCSVCQDKTVVQCRCGHASREIPCELLKDLSDNVLCQRKCNKKLSCGRHKCRSVCCVSTTHRCGVVCGRALACGQHRCEEFCHTGRCAPCPRLVFDELRCECGAEVLLPPVACGARPPPCAAPCRRARACRHPPHHSCHVGDCPPCVVLTTKRCHGNHEERKTIPCSQEEFSCGLPCGKPLPCGKHNCIKTCHKGPCDTGKCTQPCTEKRLGCGHPCAAPCHVGAAEGSAAAACPSSAPCRRLVRATCACGRREQERACCDNTRDYDRMVSALAATKIQDGGSVDLADVHRPANILKTLECEEECRAEARARRLALALQLRNPDVSSKLAPRYSEHVRATAQREPAFALHVHDKLTELVQLAKKSKQKTRSHSFPSMNWQKRQFIHEMCEHFGCESVAYDAEPNRNVVATADREKSWLPAMSVLEVLAREAGKRRVPPPVLRAPAAAPSNTAAKSSGGGWATLTSTNAWAARSQPKPPPTSSESKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00820619;
90% Identity: iTF_00429576;
80% Identity: -