Tjap003029.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Theretra japonica
Gene Symbol
-
Assembly
GCA_033459515.1
Location
CM065930.1:5326176-5331166[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.084 5.4 8.0 3.4 2 22 181 201 180 201 0.96
2 16 2.9 1.8e+02 3.1 1.0 1 23 299 321 299 321 0.82
3 16 0.44 28 5.7 0.3 2 23 456 477 455 477 0.96
4 16 0.00083 0.054 14.3 0.4 2 23 557 578 556 578 0.97
5 16 0.43 28 5.7 2.3 1 23 586 608 586 608 0.98
6 16 0.13 8.3 7.4 3.2 1 23 645 667 645 667 0.95
7 16 0.0002 0.013 16.2 4.0 1 23 675 697 675 697 0.99
8 16 0.21 13 6.7 2.6 1 23 782 804 782 804 0.98
9 16 0.14 9.2 7.2 0.4 1 19 860 878 860 879 0.97
10 16 0.082 5.2 8.0 0.1 1 23 888 910 888 910 0.93
11 16 0.0013 0.087 13.6 0.6 1 23 980 1002 980 1002 0.96
12 16 0.011 0.7 10.8 1.1 1 23 1008 1030 1008 1030 0.96
13 16 0.0056 0.36 11.7 2.6 1 23 1120 1142 1120 1142 0.97
14 16 0.00014 0.009 16.7 1.4 1 23 1148 1170 1148 1170 0.99
15 16 0.61 39 5.3 2.2 1 23 1261 1283 1261 1283 0.96
16 16 0.0029 0.19 12.6 3.7 1 23 1294 1316 1294 1316 0.98

Sequence Information

Coding Sequence
ATGGGCCTACAATACTCCGAAAAGGACATTATCACATCAAACAGTGACTCCAATGATGCTGAATCAGGTATGAAAGAACAATCGATGCGAGATCAAACTCACGCTATGAATGAAAATTCACAAGACTCAAAGTCAAATAAACAATGCAAGAAAACTCCGAGACCCATACCGCAACTCATTCCACTGAATGCTTCCACGcccaatcaaaataaaacatctccCGGCGAACCACCGGCAAAGAAATTCAAAGAATCAACTAATGAAAGTAGTAACCCTAGCTCAGAAAGTAAATCCGACAGTCAGCCGTTCGTCCCTTCGATGAATGCAAAAGAGTCTGGAACGCGAAAGAAAAATGAATCATTTTTTGATCGATTAAAAGAAAGACTTCTCACGGAGACTGGAGAAAATGGTTCCCTCACGTGTAAAAATTGTGGCTTTGAAAGCAAATGTTTATCAGAACATTCTGTGCATGAAAAAAATTGCACGCCATTGGGAAATCGCACTACCACAAATACATTGATGTCCAGTTTAAGTTCAACACGTTGTCAAAACTGCAGGCATCGATGTAAATCAAGCGCCGATTTACTTGTTCATATGAAAACATGCAGAAAAGCTGAGAGACTGGGGGATGTCACATATGAAGACACAAAGAGTCAAGAAAGCAGTGAAGTTTCTTCTAAAACGGAAAAAGATAGCGAACCACATCCCATGGAGAATGTAGTTTTCGTATGGAATAATATCAATCATGAGACATCTAAATTCGACACACCGTTAGACATTAACATAAATGACGATTCAACGCTTCCTGAAATGAATCGAAGTTATGACAACGATACAGTCGATGATAACGAGAGTATGAACTTATCGCCAAGTCAAGCTGttggaaaaaatgtttttaaatgtccTCATTGTCCATTCTGGGCGTCTACAGCATCTAGGTTCCATGTTCACATTGTgggtcatttaaataaaaagccCTTTGAATGCTCTTTGTGCAAGTACAAGTCTAATTGGCGTTGGGACATCACAAAACATATTAAGCTGAAGTCCGCTAGAGATCCTGAGCATAACGAGGCCAAAGTGCTAATGACTGATGAAACTGGCAGAAggaattatagtaaatatagcAAATTCTTGGCAATGCcagttttaaatgaaaatggtgAGAATGAATTTCATTACTTGGATTCAAATACGACTGTTGATGCTTCAATGGAAGTTGATGAGTCATTTAGTGACGCGAATGACGTGACAAATGCTTCGGGTGACATGCAACCTCTCAACCTACAAACCCAGCACAACGAACTCAAGTCGGATGCAATGGACATGAGACAAGCAGACAAGAAAGTGAAAAAGACATTGTGGAAATGCAAAAAATGCAATTACCGAGATCCATCAAAAGAGGCTCTACTGGAGCACGTTCGAGAACATTCCAGAGTGGAGGGCAATGACGAGGATCCGAAAAATCTCAGCGGAAAGAAACCTGACAGCACACCAGACCCGTCGGACTTGGCCTACCGCTGTGGTCACTGCAATCAACTATCCAACTGGAAACACGTTATACAGCGTCATTGCCGATTGAAGCATGAAGGTGTCATAAAAGTAATTACTACGGTGAAGCCAAAACCGGACCCGGCGACTTCAGCTATGGGTGAACCAATCAACGACAGATGCCCTAAATGTCCATATCGAACAACCGACAAAAACGGCCTTATGACTCATATCCAGCAACATCAGCCTTCCACGCACTCCATATTCAAGTGCTATTTCTGTCCATTCTTCGTCAAGGATGAATGTGAGTTAGTGCAACACTTACAACTTCACGGCGTCACAGACCCAGAAGATTACATTTCTAAAGCCATGGGGTGCAGATCACCGTTACCAGAGCCACAGTCCGTTCTTGCGCCTTCCATCTCAGGCAGCACAAAACGACACCGGTGTACAGAATGCCCTTACGAGACAAATAGTAAATCCCAATATATGTATCACGAGCAATTCCACAGACTGCCCCCAGACACCCCGTACAAGTGCCCAGAATGCAACTACAGCGTGTCTAAAAGACATTTACTTCATCAACATTTAAGAGTACACGGTATTATTCCAAAGAAACACGAAACGGAAGCGGATTTGGAAGCCGTGCCATCGATTcctaaaatagaaaacaacacGAATGTACCTACCAACAACCTAGATGAGACACCATTTGTTTGGGTATCAGCAAAAAATGAATTccataaaatgtacaaatgcCGTTATTGTTCATATGTGAATTcgcaaaaatgtaaaatacccAATCATGAAAAAATTCATTGCTTCACATTCGAAAATAGTGATGTAACGGTGTACAAATGTTTGGAATGCAAATTTACTTGTGATAACTCGGGAAGATTAGCGGACCATTCCAAATCTCATGGTGAAATATACGGTCGAATTTATTGCCCAGTAGAAGATGACGTTCCAGATGAAGAACAAGTAGCCAAATTACGCAAAGTAATCGCTCTGGAAAAATCAAACACTGCTGAAGTGCCCACTAAGGATGAACTCGttataattgaaaacaaagaaataaaattattatatttctgtcAAAAATGTCCAGCAAGATATTTTACTGAAAGCGAATTAAAAGTTCACGACGCCTTCCATGATTCgacgtatttatataaatgtaaaaactgTGATTTCTCGGTACCCGAAGAAGATGAATTAACATTACACAATGTTGTACACTCAGACGAATATCATACAAAAACCAAAATGCTTAAATTTGTCCACAACGTGCATCCTCTACACAAAGAGCCTCGGGTAGAACTTGTTCATTGTCAAGATACCGTAGAAATCGCATGGGTAGTAAATCCtgttaaacaaaatgaaaatgatgttaATGTTGAAACGACTAGTAAGAAACACAATGAATCGAGACACATACCTAAACAATATACATGTAAAGAATGCCCCGCTAAGTTTTTCAAAAGCTCTGCACTCAGCTATCACATGGGTCTACATGGAGGCGAAGGTGAGCATAAGTGCAAGAAATGCAGTTACGCAGTCAAAAACGTTGGAAATTTAGCAAAACACGAACTTTTGCATGAACAGGAAAATAAAGCGAGCAACTGTGATTACGAATCTGGAGAGGATGtagattataaaaatgttcctcTGTCAGGAACCGATCTTTTCCAGAGAAAAACTGAAGCTCAAAAGAGGGTATTAATCGATAAAGATAAATTAGTCAAACCCAATGACCATTTTCCACCCGTGCTTCAAGCTGACCCCCAATTTGGTTATCTTATGCACGGTAACCCAGAATTTATCTATccaacatacttaaaaaatggACGCCAAAAAGAAAAGCGTTACAAATGCCATAAGTGCCCTTCCGCTTTTGAAAAACGCGAGCAATACAAAATCCATCTCTCATTGCACGGATCGAAGCAACGATATAAGTGCGAACTTTGCGATTACTCCGTGAAGTACTACGCCAACTATGTTCAACATATGAGGAAACATCAAATGAATGACGAAGCTCAAGCTGAAAGGAAAAAAGGCGGTAGTGGGTTTTCTGAACCTGAAAGCCACGATATTAAACAAGAAGACAGTTCAGATAACATAAAGTTAGCGATAAAAACAATGCCCAGAGGAACACCCAGAAGTGATTTCCAACAGTTCTCGATCAGGGACCAACAAACACTACGATTACTGCAGAGGAGACgatcaataaataatgcagGAAAAGAAACCAATACCATAGAAACATCGCCAACAAAAGAACGCAAGTTACATATGTGTTTGTTGTGCCCATACACTAACCAGCGACAGGACGCCTTGACCAATCACTACAAACGGCATGATGATAGCGACGCTCTAACCACGGGTAACCACAAGTGCTCTTACTGTGACCTTGTTGTTATTCAATCTCATTTCCTGCGGGAACATTTAAAAACGCATTTCAATTACCACAAAACACTCATTCCCGAATGCTTTGTGGCAAACGAAAATGTCAGTTTTACCATAACAAAAATGGACGATAAAAGTGAGCCAGTTGATCTCAAATTAGATTTCCAAAATAAGAACTATAAGTGCAATGAAGAGAAAATTTTCGTAAAAATTAATACTGGAGAGTTGATGGTAGAATAG
Protein Sequence
MGLQYSEKDIITSNSDSNDAESGMKEQSMRDQTHAMNENSQDSKSNKQCKKTPRPIPQLIPLNASTPNQNKTSPGEPPAKKFKESTNESSNPSSESKSDSQPFVPSMNAKESGTRKKNESFFDRLKERLLTETGENGSLTCKNCGFESKCLSEHSVHEKNCTPLGNRTTTNTLMSSLSSTRCQNCRHRCKSSADLLVHMKTCRKAERLGDVTYEDTKSQESSEVSSKTEKDSEPHPMENVVFVWNNINHETSKFDTPLDININDDSTLPEMNRSYDNDTVDDNESMNLSPSQAVGKNVFKCPHCPFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYSKFLAMPVLNENGENEFHYLDSNTTVDASMEVDESFSDANDVTNASGDMQPLNLQTQHNELKSDAMDMRQADKKVKKTLWKCKKCNYRDPSKEALLEHVREHSRVEGNDEDPKNLSGKKPDSTPDPSDLAYRCGHCNQLSNWKHVIQRHCRLKHEGVIKVITTVKPKPDPATSAMGEPINDRCPKCPYRTTDKNGLMTHIQQHQPSTHSIFKCYFCPFFVKDECELVQHLQLHGVTDPEDYISKAMGCRSPLPEPQSVLAPSISGSTKRHRCTECPYETNSKSQYMYHEQFHRLPPDTPYKCPECNYSVSKRHLLHQHLRVHGIIPKKHETEADLEAVPSIPKIENNTNVPTNNLDETPFVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCFTFENSDVTVYKCLECKFTCDNSGRLADHSKSHGEIYGRIYCPVEDDVPDEEQVAKLRKVIALEKSNTAEVPTKDELVIIENKEIKLLYFCQKCPARYFTESELKVHDAFHDSTYLYKCKNCDFSVPEEDELTLHNVVHSDEYHTKTKMLKFVHNVHPLHKEPRVELVHCQDTVEIAWVVNPVKQNENDVNVETTSKKHNESRHIPKQYTCKECPAKFFKSSALSYHMGLHGGEGEHKCKKCSYAVKNVGNLAKHELLHEQENKASNCDYESGEDVDYKNVPLSGTDLFQRKTEAQKRVLIDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGGSGFSEPESHDIKQEDSSDNIKLAIKTMPRGTPRSDFQQFSIRDQQTLRLLQRRRSINNAGKETNTIETSPTKERKLHMCLLCPYTNQRQDALTNHYKRHDDSDALTTGNHKCSYCDLVVIQSHFLREHLKTHFNYHKTLIPECFVANENVSFTITKMDDKSEPVDLKLDFQNKNYKCNEEKIFVKINTGELMVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01359347;
90% Identity
iTF_00819621;
80% Identity
-