Tjap008101.1
Basic Information
- Insect
- Theretra japonica
- Gene Symbol
- -
- Assembly
- GCA_033459515.1
- Location
- CM065937.1:5212604-5213800[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-13 3.8e-11 43.4 0.0 6 108 42 142 38 144 0.90
Sequence Information
- Coding Sequence
- ATGACGGTGGTTACGAATCCCGCTCGCACCCAGAGCGACGACGAAATCCACACAATCGATAGCATGAACGGCTACAACGGCGAGTCGTCCGGCCTCGAGCTTGACGACAACACGCGCCTCTACGATGACGAGAAGGAAAGCGACATCGTGTTCGTGGCGGGCATCAACGGCGACACGTGGCGCTATCCCGGACATCGTCGCGTGCTGGCCGCCACTAGCCCCGTATTTGCTGCTCTACTCACTGCCAAAACTGATGTCATTGTGGTTGACTACGTCGATAGACGTGGCTTTGAACAACTGCTCCGCTACCACTACTGCGAGCCTACTCAGCTGAATTCTGTGGCCACTGCTCGCTGCTCGCTCGATGCTGCATACAAGTTTCTATGCCCACTTCTCGCCGAACGATGTGCTCGGCGGCTCGATGAGATGCTAGATGCCGGTGTTGCCCTCGAAATACTGCGCGACCTGCGTTACTTGTGCGCTCGGCTCCCCGGAGCCGCCTCGGCACCTCCACTGCCCGCGCTCACTAATGATGCCGCCGCAAGGTCGCTGGCGCAGTGCTCACGATGGTGCGATTCGCTGGCACACAACGCACTTCTGGTCCTCGATGATAATGCCGACGAGGCTCTAACTGATGAACGCCTCGAGGAGTTAACTTACGAAGATCTTGCGTTGATCGTGAAACGTGACACACTACGCGTGTCCAGCGAGCTGGTATTGGCAGAGGCTCTATCGCGATGGGCCACCGCTGCCTGCAAGCGTACTAAGCGCGAGTTGACTCCCAGCAATAAGCGCGCTGCACTCGGCGAGCTGGCATACTGCCCTCGATACTTGCTGCTCTCTGGAGAAGAACTGGACAGGGCATTGGCTTTAGAGCTTTTGGAGCCGGTAGAGCGCGCACTTGTCACTGCCAGGGCCCGCAAACTGTCAGCCCCGGTGCCGGTGGGAGCTGAACAGGAAGGTATGCTCCGCCGTTGGGCCCGCCCGCGTCCAACTCAGCCTGCCAATTTGCCAGTGCACCTGAGCCCTCGCTCCGAACAGCCAAGTGACGAGGCGCAGCCCAGCCGGCTCTGCGTGCGCCGCTCTAAGAGACCCAAGCAGCCCAGCTTTGCAGTTGAAGAGACTAATAAAAGGGAGGGCTGCTGCGCTTGCTTCGGAGACGGACTTCTGAGGgcttttatttgtctttttgaCTGA
- Protein Sequence
- MTVVTNPARTQSDDEIHTIDSMNGYNGESSGLELDDNTRLYDDEKESDIVFVAGINGDTWRYPGHRRVLAATSPVFAALLTAKTDVIVVDYVDRRGFEQLLRYHYCEPTQLNSVATARCSLDAAYKFLCPLLAERCARRLDEMLDAGVALEILRDLRYLCARLPGAASAPPLPALTNDAAARSLAQCSRWCDSLAHNALLVLDDNADEALTDERLEELTYEDLALIVKRDTLRVSSELVLAEALSRWATAACKRTKRELTPSNKRAALGELAYCPRYLLLSGEELDRALALELLEPVERALVTARARKLSAPVPVGAEQEGMLRRWARPRPTQPANLPVHLSPRSEQPSDEAQPSRLCVRRSKRPKQPSFAVEETNKREGCCACFGDGLLRAFICLFD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00715937;
- 90% Identity
- iTF_00429198; iTF_00820259; iTF_00819343; iTF_00428310; iTF_00858744; iTF_00787843; iTF_01010563; iTF_00290866; iTF_00859666; iTF_00063767; iTF_00341499; iTF_01359037;
- 80% Identity
- -