Tobe016007.1
Basic Information
- Insect
- Thera obeliscata
- Gene Symbol
- nfxl1
- Assembly
- GCA_947578465.1
- Location
- OX387916.1:25393409-25395883[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 3 2.4e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 19 0.016 1.3e+02 3.2 0.3 4 10 169 175 168 176 0.97 3 19 4.7e-07 0.0037 17.6 15.9 3 19 186 202 185 202 0.95 4 19 0.22 1.8e+03 -0.5 3.5 1 8 227 233 227 234 0.89 5 19 5.1e-08 0.00041 20.7 12.9 3 19 239 255 237 255 0.91 6 19 0.83 6.7e+03 -2.3 0.9 6 10 280 284 279 284 0.90 7 19 4e-09 3.2e-05 24.2 12.5 1 19 290 308 290 308 0.99 8 19 6.3e-06 0.051 14.0 17.5 3 19 345 361 337 361 0.88 9 19 8.9e-06 0.072 13.5 18.3 1 18 395 412 395 413 0.97 10 19 3.5e-08 0.00028 21.2 16.9 1 19 422 440 422 440 0.99 11 19 0.00031 2.5 8.6 6.4 9 19 488 498 486 498 0.89 12 19 0.0022 18 5.9 7.1 1 11 508 517 508 518 0.96 13 19 0.46 3.7e+03 -1.5 3.3 14 19 547 552 547 552 0.85 14 19 0.35 2.8e+03 -1.1 0.4 8 12 568 572 567 579 0.79 15 19 9.1e-06 0.073 13.5 6.1 1 11 588 598 588 599 0.98 16 19 0.43 3.5e+03 -1.4 1.4 14 19 612 617 612 617 0.87 17 19 0.0004 3.2 8.3 12.8 1 18 628 645 628 646 0.84 18 19 3 2.4e+04 -6.5 3.4 9 13 652 656 652 656 0.71 19 19 1.7e-05 0.14 12.6 13.1 1 18 687 705 687 706 0.87
Sequence Information
- Coding Sequence
- ATGGCGCGTCGTTACAAAGACGCTGCGGCGAAATTGCAGCAAAACGTGCAGAAACATCTCAAAGATATGAAAGATCTGTCTTCCTCCGAAGATGAAGAGCCTTACGAGTCCAGTGTCATTGAGGGGATGTTTCAGAGCTATTGGCGAGGCGGTGGGGACACTCAGATGCTCAATAGGACCAAGAATCTTCTAGAAGAGGCGATCAGCGGTCGCTCAGTAGCATGCTTGATCTGCATCAGTTCTATCAAACGGATCCATGCTGTGTGGACATGTGACCACTGCTACTCATATTTCCATCTCTCCTGTATCCAAAAATGGGGTTCTGACAGCATAAGTTTGCGCAGTATCGAACCTGAAGCCCCAATAAGTGTGTTTAGGCCACAGAAAATTGAATGGTGCTGTCCGAAGTGCCGCAATTCGTATAGCAAAGAAGAAATACCGAGGAAGTACAGGTGTTTTTGCAGGAAGACTGATAATCCACCCGTGCACCCGTGGCTGATACCTCATACTTGTGGGGAAGTGTGTGGAAAGAGGCTTTCAACCAGCGAGAACTGTAAACACAAGTGCTTACTCCTCTGTCATCCCGGTCCGTGTCCTCCATGTCCACAAACAGTGAATGGGATATGCTACTGCGAAAAGGAACATAAGAAAGTCAGATGCAGTGCAGCCAAATGGTCCTGTGGCCATCAGTGCAAGAAAACTTTGCTCTGCCAGACTCATAAATGTGAACTGATATGCCATGAAGGAGATTGCCCACCGTGCACTTACACCAGTGTTCAGCCTTGTCAGTGCGGAGCTGAGAAAACCAAAAGACCCTGCGATGATCCTTTCTGGCACTGTGAAAAACCTTGCAGCAAACCATACTCGTGCGGCTATCATAAATGTGAGAAAGTATGCCATTCAGGCAGCTGCACAGAATGCCCCAACTCCGGAATGAGGTCCTGTCCGTGCGGAGCAAACGAGAGGTATGTCCAATGTCCTGACACCATGGAAACATGCCATGGAACCTGTGGCAAGGAACACGGTGACTGTGCACACAGTTGCCCGGTGAAATGCCACAAAGGTCCATGCCCTCCCTGTCAAGTACTGATTCAAAAGAAATGTCAATGTTTAACCCACACTAGATCCCTTCCTTGCAGCAAGGACTTCAAATGTGACACGAAATGCAGAGGAACCCGACCGTGTGGGAAGCATGGCTGTGCTAGAAAATGCTGCAACGGCAACTGTCCTCCGTGTGAGAAGGTGTGTGATAAACCTCTTCAATGTGGCCGACATAAGTGTACAACCATCTGCCACCATGGACCATGCTATCCCTGCCCAATGGAATCAAAGGTCACTTGCAAGTGTAAGGAGACATACGTAACTGTTCCTTGTGGGAGGGAGAGGTTCACCAAACCACCAAAATGTAACTTACCCTGCAAGGTGAAATACAAATGTGGCCATGCTGAGGAAAACAAGCATTCCTGCCATTTCGGAGACTGTCCTCCATGCAAAGCCATCTGTTACAAAAATTACCCGAAATGTGGTCATGAATGCAAGGCAATTTGCCATCAGTTCAAAGCAGTTGTCTTCAAACAGGTTGAGAAACCAGCTACTCCTTGGGAAGTTCAACCACCGAAGACCAAGATCATGACTCTGGAGTGTCCTCCGTGTACTACACCAGTGACTGTCATTTGTTTCGGGGAACATGAGACAGACAGCCAACCGTGTCACACAGCTGCCCGTAGACCTTGTGGGAGGGAATGTGGAAAACTTCTGGCTTGTGGAAACCACAGCTGCACTCAACTTTGTCACTTGTATAGCCCTGATCCTGACTACCAAAACGTGCCGTACGATTGCAAGCCTTGTAGGAGGGAGTGTCTGAATCCTCGGCCAGCAAAATGCTCCCATAAGTGCTCCAAAAGCTCCTGCCATCCTGGAGCATGCCTGCCTTGTGAAACAATGGAACGCATCCCATGCCATTGCGGTGTCACTGAACTGTACCTCCGCTGTAGAGAATACACTACAGCTACAGAAGAGATGCTGTCTTGCAAGCAGCAATGCCCTAAGAATTTAGACTGCGGTCATCGCTGCAAAAACACCTGTCATCCAGGTACTTGCAGCAAACAAGTCTGTACCAAGAAAACTAAGATACACTGCCCTTGTGGGAATCTAAAGAAAGATGCTCCTTGCAATGCCGTCAAAAGCGGAGAAGCTACTATTGAGTGTGACACGACATGTGAAGTCAAAAAAGCAGCTGCTAAACTCGCAAGTGAGAAAGAACATCAGAGATTGAAGCAGTTAGAGGAGGAAAGGAATAAGAAAGAGCTGGCTGAATACGAGTGGAAACTCAGTGGGAAAAAGAAGAAACATAAGGAAAAGAAGGTTGTGATCAATAAGGATGACAGGAATTGGGTGCATCGACACTGGCTGCCGATTCTATCACTTTTAGTAGCAATATTAGCGGTAGGATATATTATTTGTTTTAATATTTAG
- Protein Sequence
- MARRYKDAAAKLQQNVQKHLKDMKDLSSSEDEEPYESSVIEGMFQSYWRGGGDTQMLNRTKNLLEEAISGRSVACLICISSIKRIHAVWTCDHCYSYFHLSCIQKWGSDSISLRSIEPEAPISVFRPQKIEWCCPKCRNSYSKEEIPRKYRCFCRKTDNPPVHPWLIPHTCGEVCGKRLSTSENCKHKCLLLCHPGPCPPCPQTVNGICYCEKEHKKVRCSAAKWSCGHQCKKTLLCQTHKCELICHEGDCPPCTYTSVQPCQCGAEKTKRPCDDPFWHCEKPCSKPYSCGYHKCEKVCHSGSCTECPNSGMRSCPCGANERYVQCPDTMETCHGTCGKEHGDCAHSCPVKCHKGPCPPCQVLIQKKCQCLTHTRSLPCSKDFKCDTKCRGTRPCGKHGCARKCCNGNCPPCEKVCDKPLQCGRHKCTTICHHGPCYPCPMESKVTCKCKETYVTVPCGRERFTKPPKCNLPCKVKYKCGHAEENKHSCHFGDCPPCKAICYKNYPKCGHECKAICHQFKAVVFKQVEKPATPWEVQPPKTKIMTLECPPCTTPVTVICFGEHETDSQPCHTAARRPCGRECGKLLACGNHSCTQLCHLYSPDPDYQNVPYDCKPCRRECLNPRPAKCSHKCSKSSCHPGACLPCETMERIPCHCGVTELYLRCREYTTATEEMLSCKQQCPKNLDCGHRCKNTCHPGTCSKQVCTKKTKIHCPCGNLKKDAPCNAVKSGEATIECDTTCEVKKAAAKLASEKEHQRLKQLEEERNKKELAEYEWKLSGKKKKHKEKKVVINKDDRNWVHRHWLPILSLLVAILAVGYIICFNI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00857272;
- 90% Identity
- iTF_01220335;
- 80% Identity
- -