Basic Information

Insect: Thera obeliscata
Gene Symbol: -
Assembly: GCA_947578465.1
Location: OX387922.1:11399211-11406672[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.007 0.43 11.5 0.4 2 20 185 203 184 207 0.94

2 11 0.025 1.6 9.8 1.2 2 23 247 268 246 268 0.96

3 11 0.023 1.4 9.9 0.4 2 20 372 390 371 392 0.89

4 11 0.00038 0.023 15.5 1.7 1 23 400 423 400 423 0.97

5 11 1.9e-05 0.0011 19.6 1.2 1 23 445 467 445 467 0.98

6 11 7.9e-07 4.8e-05 24.0 1.9 1 23 474 496 474 496 0.98

7 11 3.1e-07 1.9e-05 25.2 1.5 3 23 510 530 508 530 0.96

8 11 1.3e-06 7.9e-05 23.3 0.8 1 23 536 558 536 558 0.99

9 11 1.7e-06 0.00011 22.9 2.8 2 23 565 586 564 586 0.96

10 11 1.5e-07 9.5e-06 26.2 1.5 1 23 592 614 592 614 0.99

11 11 0.0027 0.17 12.8 0.1 1 23 620 642 620 642 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.007	0.43	11.5	0.4	2	20	185	203	184	207	0.94
2	11	0.025	1.6	9.8	1.2	2	23	247	268	246	268	0.96
3	11	0.023	1.4	9.9	0.4	2	20	372	390	371	392	0.89
4	11	0.00038	0.023	15.5	1.7	1	23	400	423	400	423	0.97
5	11	1.9e-05	0.0011	19.6	1.2	1	23	445	467	445	467	0.98
6	11	7.9e-07	4.8e-05	24.0	1.9	1	23	474	496	474	496	0.98
7	11	3.1e-07	1.9e-05	25.2	1.5	3	23	510	530	508	530	0.96
8	11	1.3e-06	7.9e-05	23.3	0.8	1	23	536	558	536	558	0.99
9	11	1.7e-06	0.00011	22.9	2.8	2	23	565	586	564	586	0.96
10	11	1.5e-07	9.5e-06	26.2	1.5	1	23	592	614	592	614	0.99
11	11	0.0027	0.17	12.8	0.1	1	23	620	642	620	642	0.97

Sequence Information

Coding Sequence: ATGGCATCCTCAAATGAGAAAATAGAAATCAAAATTGAAAAAATGTGTCGAACATGCCTGTCAAAAGAGAGAGAATTAAACTCTCTATTTGATGTGTTTGTGGGGGAAGAATCTCTGGATTTCTTAGTGACTGCAATAACAGGACTAAAGATTCGCAAAGGTGACGGTTTGCCCACAACAATTTGCTGTGTCTGCAGAGACAAGGCAGAGAAAGCCTTTGAATTTAAAAAGAAGTCTCAGGAAGCTTATAATTCCTTAAAAGGTTTTATCTATGATGACAGTTCTACCCAGAAATCTATTGATTTTAAAACTGAAGATTCACAATGCAGTGATCACGACGATTTTTCGGACGCTGATTACAGTTTGCCTATTAAAAATGGACCGCTTGAAATGGGAAATATGGAAATCAAGGTCAAAGTTAAGCATGAAAGTTCCAGTCGAGAATATTTTGAATGTAAAAAATGCTGTCTTATATTCCAAACTCGAGCTAAATACCAAGAGCACAGGAAAAGGAAGTGTGTTAAAGTTGAATTTGAAGATCAGAGTGGCACACATTGTCCTATTTGTGGTACAAACTATGACGGAGCTAGCAGTTTGTCAAACCATATGTGGCAATTCCATGCTGACGTAATGGGTCCCAAGAAAAGGGGACGACCTAAAAAACCTATGACTTCGACAATACTGAGTAAATTAACTGAAAATGGGTTCTTTATAAAGACACTACATGGAAAAAAAACCAAATGCGGCTTTTGCAAACAGCAAGTTGATACCAAAGAAGATTTGACATCACATATGTTTCAACATAGTGATGTTAAAGTTTTATGCTGCAGTCAATGCAAGAAAATGTATCTGAAGAAAAAAAAATTTGATGCCCACCAATGTGTTGTAGATGCAATAAAAACCGCCTCAAGCAACGCTGAAGAAGACAAAACAATCTACCATGCAAGTAAGAACGCACCTATTTCAACGGAAATGTTTTTACAAGAACTCTTGGATCCGGATTGGGAAACGAATGCTGGTTTCATTCAAGTGTGCAGTTCGTGCAGTGCCGTGTTTTTGACTGACGAAGATCTTCAAGGGCATTACGATGAAGACCATCCGGAACTTTCTTTACGATGTAATCATTGTACCAAGGTATTTGCCTCTGTGAAAACGGCTTCCCGCCATAGGGCTGTGTGCAAAGATATTGATAGAACACATAGGTGCTCTACTTGTGGTCTCAAGTTTGCATATGAAATATCACTGAACAAGCACATACTAAGATACCACCAGGGAGAGAGGGTTTTTGTTGCACATCACGCAAAAGAATCTAAAATCGCGGAAAGTGTACAGTATCAATGTGACACGTGCAATAAAAAATTCCAAAGGAAAGAAGCTCTGGCTAAGCACGCAAAATTGCACATGCCAAACCAAAAGTTATTTGAATGCGAAATATGCCAAAGGAAGTTCAATAGGAGTGATAATTTACGCACCCATAAACGTATTCATGACGCGGACCGTCCTAAGCCACCGACGAACAACCACTTGTGTCTCTATTGTGGCAGAGGATTTACTAACTCGTCAAACCTTATTGTGCACATGCGAAGGCACACTGGCGAGAAGCCGTATAAGTGTGATTTCTGCGAAAAAGGTTTTCCGAGGTCTTCTGATCTTATGGTCCATAGGCGTTCTCATACCGGCGAGAAGCCCTGCGTTTGCCGTCTTTGCGGAAAAGCATTCTCTCGTAGCAACAAGTTGTCGCGTCACATGCGCGTTCACACTGGGCAGAGACCTTACAAATGCACGTACTGCGATAAGGCATTCTCACAGAGCAACGACTTGACTCTCCACGTGCGCCGTCACACTGGTGACCGCCCCTACATATGCAATGTCTGCGGGGATAGGTTTATACAGGGCACTGCATTGCAGAATCACCGCCGAGCCCATGGGCATTTTAGCGAGCCGGCGCCCCCTCCTCTAAATCCAGTACAAGCCATCACATACGCGGTATCTAGTATCACACACCCTGAGGACTCGCATCTATCTAATACCATTGGCTCCATCTAA
Protein Sequence: MASSNEKIEIKIEKMCRTCLSKERELNSLFDVFVGEESLDFLVTAITGLKIRKGDGLPTTICCVCRDKAEKAFEFKKKSQEAYNSLKGFIYDDSSTQKSIDFKTEDSQCSDHDDFSDADYSLPIKNGPLEMGNMEIKVKVKHESSSREYFECKKCCLIFQTRAKYQEHRKRKCVKVEFEDQSGTHCPICGTNYDGASSLSNHMWQFHADVMGPKKRGRPKKPMTSTILSKLTENGFFIKTLHGKKTKCGFCKQQVDTKEDLTSHMFQHSDVKVLCCSQCKKMYLKKKKFDAHQCVVDAIKTASSNAEEDKTIYHASKNAPISTEMFLQELLDPDWETNAGFIQVCSSCSAVFLTDEDLQGHYDEDHPELSLRCNHCTKVFASVKTASRHRAVCKDIDRTHRCSTCGLKFAYEISLNKHILRYHQGERVFVAHHAKESKIAESVQYQCDTCNKKFQRKEALAKHAKLHMPNQKLFECEICQRKFNRSDNLRTHKRIHDADRPKPPTNNHLCLYCGRGFTNSSNLIVHMRRHTGEKPYKCDFCEKGFPRSSDLMVHRRSHTGEKPCVCRLCGKAFSRSNKLSRHMRVHTGQRPYKCTYCDKAFSQSNDLTLHVRRHTGDRPYICNVCGDRFIQGTALQNHRRAHGHFSEPAPPPLNPVQAITYAVSSITHPEDSHLSNTIGSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01219986;
90% Identity: iTF_01429227;
80% Identity: iTF_01429227;