Tobe005601.1
Basic Information
- Insect
- Thera obeliscata
- Gene Symbol
- TFDP1
- Assembly
- GCA_947578465.1
- Location
- OX387924.1:8488563-8497798[-]
Transcription Factor Domain
- TF Family
- E2F
- Domain
- E2F_TDP domain
- PFAM
- PF02319
- TF Group
- Helix-turn-helix
- Description
- This family contains the transcription factor E2F and its dimerisation partners TDP1 and TDP2, which stimulate E2F-dependent transcription. E2F binds to DNA as a homodimer or as a heterodimer in association with TDP1/2, the heterodimer having increased binding efficiency. The crystal structure of an E2F4-DP2-DNA complex shows that the DNA-binding domains of the E2F and DP proteins both have a fold related to the winged-helix DNA-binding motif. Recognition of the central c/gGCGCg/c sequence of the consensus DNA-binding site is symmetric, and amino acids that contact these bases are conserved among all known E2F and DP proteins.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-23 1.4e-19 70.0 0.0 2 65 182 261 181 261 0.97
Sequence Information
- Coding Sequence
- ATGTCTCAGACAGATAGTACAGTAAATTTCCTTATCCACGACGCTAATGGGGAGCCTCAAGTCGTGAAAGTAGTGCAGAATTCAAACATACAAGCTATTCCTCAAATTAAAATTAAGCCCAATTCTGTGAAGGTGATTAGACTTCCAAGTTCTCAAGGAAAGGGACCTGTGCTAAGAGCTATTAGAATAAGCAGTCTCAAAAACTTGTCAAAAGTGGTAAAAGTTGCAGCCAGCAAGCCAGTATTCACACCTATTGCCCCTAAGGTTGAACCAGGTTCTCCCGAAGAGAAACAACTACTGAAAGAACTGAAACCTAAAAAGCAACTGCCCAGAGACTTGTCAAAACTAAAAGTTTTAGAACCATTCGTAAACATAGCTCCAGGACCTGCACCTGAGCTCAGGGTCACCAGCTCCAGCTCTCCAACCAGTAAAAAAAAAGAACAGCCCAGCAATATGTCTCATGGCACCAGAAGAAGACATGACTCGGACAATGATGTCTCTGCTGTATACACGACGAAACGCCGCAAGCACGCCGACAAAGTTGGAAAAGGGTTGAGGCATTTCTCCATGAAAGTTTGTGAAAAAGTGAGGAACAAGGGGTTCACTTCCTACAATGAGGTTGCTGATGAGCTGGTACTGGAATTTGCGGCTGGAATCCACGGTTCTGGTGACAGTCAACAATATGACCAAAAGAACATTCGGCGGCGGGTTTACGACGCGTTAAATGTATTGATGGCCATGAACATAATATCAAAAGAGAAGAAAGAAATCAGATGGCTGGGCCTGCCCACTAACAGCGTGCAGGAGTGCAACTCGTTGGAAAAGGAAAAACAAGAAAAACTGGATCAGATACAGAAGAAAACGCAACAGTTACAGGAATTAATTCTGCAGCACATCTCATTCAAAAGTTTGATAGACAGAAATAAGGACGCCGAAAACAAAGGAATCAAACCCTCTCCGTCGTCAGCGATCCATTTACCATTTATTGTGGTAAATACGAGCGATAAGGCGTTGATCGACTGCAGTATTTCAAATGATAAGACGGAGTACATGTTTAACTTTAACAAGAGGTTCCAAATACATGACGACATCGATATTCTGAAGAGAATGGGGCTTTTATTTGGATTAGACAAAGGCGAATGCACAGAAGAAGATGTTGAGAGAGCCAAAAGCATGGTGCCTAATTCGTTAGAAAGTTACGTCGAACAAATGGCTAAAGGTGATTTAAGTAGCATCAACTCAATAACCGGTGAGGAATTCGACGACGATGAAGAAGAGGAAGACGAGCCTTTGGAAGGAGAGGGGGAGAACGAGATAGAAGAAGACCATGAGGAACCAGAGGGAAATGAGTATAGCGACGACAGTAGCGATGTTGATGTCTAA
- Protein Sequence
- MSQTDSTVNFLIHDANGEPQVVKVVQNSNIQAIPQIKIKPNSVKVIRLPSSQGKGPVLRAIRISSLKNLSKVVKVAASKPVFTPIAPKVEPGSPEEKQLLKELKPKKQLPRDLSKLKVLEPFVNIAPGPAPELRVTSSSSPTSKKKEQPSNMSHGTRRRHDSDNDVSAVYTTKRRKHADKVGKGLRHFSMKVCEKVRNKGFTSYNEVADELVLEFAAGIHGSGDSQQYDQKNIRRRVYDALNVLMAMNIISKEKKEIRWLGLPTNSVQECNSLEKEKQEKLDQIQKKTQQLQELILQHISFKSLIDRNKDAENKGIKPSPSSAIHLPFIVVNTSDKALIDCSISNDKTEYMFNFNKRFQIHDDIDILKRMGLLFGLDKGECTEEDVERAKSMVPNSLESYVEQMAKGDLSSINSITGEEFDDDEEEEDEPLEGEGENEIEEDHEEPEGNEYSDDSSDVDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00266979; iTF_00810791; iTF_00119403; iTF_00662029; iTF_00661073; iTF_00737267; iTF_00686132; iTF_00638445; iTF_01219579; iTF_01528991; iTF_00662880; iTF_01528074; iTF_01335723; iTF_01170363; iTF_01171258; iTF_00361407; iTF_00376896;
- 90% Identity
- iTF_01219579;
- 80% Identity
- -