Basic Information

Gene Symbol
Kdm5
Assembly
GCA_947578465.1
Location
OX387918.1:17976508-17997118[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.9e-23 4.5e-20 72.2 0.0 2 89 17 100 16 100 0.93
2 2 3.7 9e+03 -2.4 0.0 45 69 1208 1233 1195 1244 0.69

Sequence Information

Coding Sequence
ATGCAAGGATCTACAATCAAGTATTCCTTTCAGGCAATAACCCGGGTAAAGCTGAACTTCCTCGACCAAATCATCAAGTTCTGGGAGCTACAAGGCTCAGTTCTCAAGATTCCCACTGTGGAGCGTAAGCCTCTAGACCTTTACGCTCTGCACAAAGTTGTCAAAGAAGCAGAAGGCTTCGAAGTATGCTCAGCGGAGCGCAAATGGTCCAAGATTGCGCGCCGCATGGGCCATCCCCAAGGAAAAGGCATAGGCTCCATCCTCAAGAACCACTACGAGAGGATCCTCTACCCATACGATGTGTTCAAGAGCAATGGCGCTGTCGGAGATAATAAGGAGACTAAGATAGAAGTGAAACGCGAGTCTACCCCCGATGGCGCCGGGGCTGGTCCCCGCTCTCGCTCCGCCTCAAAATGTCCCCCCGCCACCCCGCCGCCAGCCCCTTCCCCGCGCCGGTACAAGTGCGAGCCCGAGCCCGCTGAGGGAAGTCACACCGAGGGGGCGCTGCCTCCAAACAACGACAAGGGGGTCAAAACACCCGTCAAAGAAGAGAGCCCAGAGACAAATAGACGCAGTCCCCGTGAAAACAAATGGATGTCCCGAACCGGTAGCTGCGGGTCCCGCGGTCGTGTGACGCGTTCCACTCGGCTGCGTGAGCACCGTATGTCAAACATGACGGTTTCCGTCACGCCGGCGCCGCCGCTAGGACCAGTGCAGGACTTGCCCGGCGCGGTTATCAGCCCTAATGATCCGTTGGCGAAATACATGTGTCACGTTTGCGGTCGCGGCGACGTGGAAGAGCAAATGTTGCTGTGTGATGGTTGTGATGACTCGTACCACACATTCTGTCTGCTGCCGCCGTTAGCGGACGTGCCCAAGGGTGATTGGCGGTGCCCCGTCTGTCTTGCTGAAGCGGTGTCAAAGCCAACAGAAGCCTTCGGATTCGAGCAAGCCACCCGAGAATACACTCTCCAGCAGTTCGGAGAGATGGCAGATCAATTCAAATCGGACTACTTCAACATGCCAGTACATATGGTGCCAACGTCAACTGTTGAGAAGGAGTTTTGGCGCGTAGTTTCTTCTATCGATGAAGATGTCACGGTGGAGTATGGAGCTGATCTACACTCTATGGACCATGGATCTGGTTTCCCAACAAAGTCCAGTGCTCACCTTTACCCCGGAGAGCAGCAGTATGCAGAGTCAAGCTGGAATCTCAACAACCTGCCGGTCTTGGAAGGCTCAGTGCTGGGACACATCAACGCTGATATATCTGGCATGAAGGTTCCATGGCTGTATGTGGGCATGTGCTTTGCCACGTTCTGCTGGCACAACGAAGACCACTGGAGTTATTCCATCAACTATCTACACTGGGGAGAGCCTAAGACTTGGTACGGAGTCCCAAGCTCCAAAGCAGAACAATTCGAAGCAGCCATGAAGGCAGAAGCTCCCGAGCTGTTCCAGTTGCAGCCTGATCTTCTTCATCAGCTCGTCACCATCATGAATCCCAATGTTCTGATGAAAGCTGGTGTTCCAGTATACAGAATGGACCAGAATGCGGGTGAATTCGTGATCACATTCCCGCGGGCCTATCACGCGGGATTCAACCAGGGATACAACTTTGCGGAAGCCGTCAACTTTACCCCCGCTGATTGGTTAAAAATGGGTCGTGAATGCGTACTCCACTACTCTACCCTCCGTCGTTACTGCGTTTTCTCGCACGACGAGTTGGTTTGCAAGATGGCGCTCGAAGCGGACACTCTAAGTCTGACCGTGGCTTTAGCTGCTTATCGAGATATGAGGACCATGCTGCATACAGAACGGAAGCTGAGGAAGAGTATACTCCACTGGGGTGTGACAGAAGCGGAGCGTGAAGCCTTCGAGCTGCTTCCCGATGACTCGCGGCAATGCGTGTCGTGCAAGACGACGTGCTTCCTGTCGTGCGTCACGTGTCCGTGCACGCCGCACGTGGCTTGCTTGCGGCACGCGGCATTGCTGTGCAGCTGTCCGCCGCATGTTCACCGCCTGAGGTACCGCTACACCCTGGATGAACTGCCAGCGATGTTAGAAAAGTTGAAGAAGAAGTCGGAACAGTTCCGCGAATGGGCGGAGGCTGTTCAGAACGCATTAGACCCTGACACACCCAAGACTTGTGATTTGGACGGGCTGAGAGCGCATTTGCAGAGAGCTACTGAGCTTAAGATGCAAAAGACCGAGCTAGTACGCGCCTTAGAAACTGCCATCGAGGACGCAGAGAAATGCGCGTCTGTCATCCAGCAGCTAGACTTGAACAAGATGCGAACTAGAACTCGTCACCACGACCCCAAGTATCGGTTGTCGATTCATGAACTGACTCTGTTCGCCGCGGAGATTGATAGCTTAGCTTGCGTGCTGCCAGAAGGTTCTGCCGTAAAAGAAGTGCTACGTCAAACTTCAGAGTTCGAGACGCGATCAAGTGAACTACTCAACAAAGACTTGGAGAAGATCGAGACGTCATACGTCAGGGAATTGGAAGAGACTGTGGAATTAGGCAGCCGCCTCTGCATAGTCCTCCCGCACCTCGAAGCGGTAACAGTCCGGCTAGCACAAGCGCGTTGGCTAGAAGACTCGCAACATCACCGCGACAACTGCAACTCGTTAACTCCGGCCGCTCTGAAGACATTGCTGGCGAAATCTGATGAACTACTGCCTCATATCGCCATTGAGAAGGAGAGAGCTATACTTTACAAACTGCAAGCTGAAGTAGAAGACTGGGAGAAGCGCGCCCAAGAAGTCCTAGTAGATCCGAACAAACCTTTCGACGACGACAATCCTCAGTACAATACTTTAGAAGAACTAACTCAACTGCTGTCTGAAGGCGGTGACATTGACGCGGCGTTACCATCATACCACACTTTGCAGACGGCCATCACGCATGCTAAGGATTGGCTCAATAAGGTTGAAGAGATGCAGTCAAAAGATCTATACCCCTACATGCACAGCGTAGAAACCCTGGTGAAGAAGAGTCAACAGCTGCCATTAGCGCTGCTCGAGAAGCATCAGTTATCGTGCGCGCTTCACTCGGCGCGGGAGTGGCAGCGCGGCGCAGCGGAAATGTTCCTCAAGCGAGTGCCGCAGCACGAGAAGAAGAACATGCCACACACATTACTGGAAGCCCTCTCTCCCCGCACGTCCCCCGCGGGCGGACGGCGTCGTACACAACCGTCGCTGGAAACCACTCTATTCTTGGACAAGTTCAATGAAGAATCCACTCCGACGGAGATTGTAGCGGCTTTCAAACAAGCCGAGACACGAGAACTGCAGGCTATCAAGGAACTCAGAACCCGCAACATGCGTAAAGACGTCCGCGCGCCGCCAGCTACCACTATCACGTTCTGCATCTGTCAGAAGCGACAATACGGCGTCATGACGCAATGCGAACTGTGCAAGGATTGGTTTCATGCATCGTGCATCGCAAACGCCCGCGACGATCGCGAAGAGTCTCCGGACCGCGAGGGTTTCCCCAGCAGCGAGTCCAAGTTCCTCTGCCCCGAGTGCGTGAGGACCAAACGACCTCGCCTAGACAGGATCCTGGCTTTACTTGTATGGCTACAGAAGCTCCCCGTTCGCTTGGCCGAGGGCGAAGCGCTACAGTGTGTCACAGAACGTGCAATGGCGTGGCAGGACCAAGCCCGCGCGATGCTAACTCAGCCGCATCAGCCCACTCATCACAAAGCTGCGGGCCGGGAGAAATCTGACAAACTGAACGCAGAATTGAAGAAGGCGACTGGTCGTGGTCATGATAGCGCGTCGCAAAATCCAAGATCGTCAGCGTCAGTAGAACACGCGTACAGTGCTACTCCAAGATCGCCGGGCACCAGGATACCACCTGCCGCGCTTCAGAAACTCGAGGATCTGATGCTGGAGGGAGATTTACTTGAGGTGGTTCTAGAAGAGCAGCAGCAGGTTTGGGAGGCGGTAAGCACGGCCCGCGGCGCGGCGGGGAGGCGGGGGGCGCGGGTACTGGATGCGGGGCGCAGGAAGAGACATCGCGCCACTCCGCGCCCGCACCAAGCCAAGCGGACCCGGCAGGCAAGGCACGCGCCGCCACAAGCTGGACCATCAACTTCTGCAACAGTTTCGTCGTCAGTAAAGCCGTCAACGTCAAAACGCGGAGGAGGTACTACTAATTACCTCAACAGGAAACAGGGTCTATCTTCGGCATCAGGCTTGATGATGCGTAAGCACTACATGGCAAGACAGGAACGTCGCAAACGAGGCGTCTCCACCAGACATAGAGGTTCTACTAGAGGCGGTGCCAGTACATCATCAGCCAGGATAGCGCAGGCGCAGGAGAGCAGTTCCTCATCCATGTCTTCGGCTGAGGATGAGGACGACTGTGTGGCTGCCAACTGTCTGCGGCCCACTGGCAAGGAGGTAGATTGGGTGCAATGCGACGGCGGTTGCGATGGCTGGTTCCACATGCATTGTGTCGGCCTGGTTAAAGGCTCGCTGGGAGAGAACGATGACTACGTCTGCGGCACTTGTGCCAGAGCCAAGCAGTGA
Protein Sequence
MQGSTIKYSFQAITRVKLNFLDQIIKFWELQGSVLKIPTVERKPLDLYALHKVVKEAEGFEVCSAERKWSKIARRMGHPQGKGIGSILKNHYERILYPYDVFKSNGAVGDNKETKIEVKRESTPDGAGAGPRSRSASKCPPATPPPAPSPRRYKCEPEPAEGSHTEGALPPNNDKGVKTPVKEESPETNRRSPRENKWMSRTGSCGSRGRVTRSTRLREHRMSNMTVSVTPAPPLGPVQDLPGAVISPNDPLAKYMCHVCGRGDVEEQMLLCDGCDDSYHTFCLLPPLADVPKGDWRCPVCLAEAVSKPTEAFGFEQATREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEKEFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYAESSWNLNNLPVLEGSVLGHINADISGMKVPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRMDQNAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECVLHYSTLRRYCVFSHDELVCKMALEADTLSLTVALAAYRDMRTMLHTERKLRKSILHWGVTEAEREAFELLPDDSRQCVSCKTTCFLSCVTCPCTPHVACLRHAALLCSCPPHVHRLRYRYTLDELPAMLEKLKKKSEQFREWAEAVQNALDPDTPKTCDLDGLRAHLQRATELKMQKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLSIHELTLFAAEIDSLACVLPEGSAVKEVLRQTSEFETRSSELLNKDLEKIETSYVRELEETVELGSRLCIVLPHLEAVTVRLAQARWLEDSQHHRDNCNSLTPAALKTLLAKSDELLPHIAIEKERAILYKLQAEVEDWEKRAQEVLVDPNKPFDDDNPQYNTLEELTQLLSEGGDIDAALPSYHTLQTAITHAKDWLNKVEEMQSKDLYPYMHSVETLVKKSQQLPLALLEKHQLSCALHSAREWQRGAAEMFLKRVPQHEKKNMPHTLLEALSPRTSPAGGRRRTQPSLETTLFLDKFNEESTPTEIVAAFKQAETRELQAIKELRTRNMRKDVRAPPATTITFCICQKRQYGVMTQCELCKDWFHASCIANARDDREESPDREGFPSSESKFLCPECVRTKRPRLDRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDQARAMLTQPHQPTHHKAAGREKSDKLNAELKKATGRGHDSASQNPRSSASVEHAYSATPRSPGTRIPPAALQKLEDLMLEGDLLEVVLEEQQQVWEAVSTARGAAGRRGARVLDAGRRKRHRATPRPHQAKRTRQARHAPPQAGPSTSATVSSSVKPSTSKRGGGTTNYLNRKQGLSSASGLMMRKHYMARQERRKRGVSTRHRGSTRGGASTSSARIAQAQESSSSSMSSAEDEDDCVAANCLRPTGKEVDWVQCDGGCDGWFHMHCVGLVKGSLGENDDYVCGTCARAKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00632545;
90% Identity
iTF_00638433;
80% Identity
-