Basic Information

Gene Symbol
Kdm5
Assembly
GCA_947095575.1
Location
OX352714.1:4630521-4654680[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-24 2.7e-21 75.9 0.0 2 89 101 184 100 184 0.93
2 2 3.5 7.6e+03 -2.5 0.0 45 69 1292 1317 1279 1331 0.69

Sequence Information

Coding Sequence
ATGGGAAAATGTGATGAAACTAATGTGGAAGTTAATATGGGGGACTCCGCGTCCCCCATGAAACCGGACAACTTCACGTTCACGCCGCCCCCGGAGGCCCCGGTCTTCGAGCCCACGGCGGAGGAGTTCCTGGACCCGTTAGCGTACATCAGCAAAATACGTCCTATCGCAGAGATGTCTGGGATCTGCAAGATTAAACCCCCAGCGCACTGGCAACCTCCGTTTGGGGTGGATGTGGACCGTCTGCGGTTCACACCCAGGATCCAGAGACTTAATGAGTTGGAGGCAATAACCAGAGTGAAGCTAAACTTCCTCGACCAGATCATAAAATTCTGGGAGCTGCAGGGCTCAGTGCTCAAGATCCCCACAGTGGAACGTAAGCCTCTGGATCTGTACGCACTGCACAAAGTTGTTAAGGAAGCAGGAGGCTTCGAAGTATGCTCAGCGGAGCGCAAATGGTCCAAGATTGCGCGCCGCATGGGCCACCCCCAAGGGAAGGGCATAGGTTCCATCCTCAAGAACCACTACGAGAGAATCCTGTACCCATATGATGTGTTCAAAAGCAATGGCGCAGTTGGTGATAATAAGGAGACTAAGATAGAAGTGAAGCGAGAGCCTACCCCCGACGGCGCCGGAGCTGGCCCCCGCGCTCGCTCCGCCTCCAAGTGTCCCCCCGCCACCCCGCCGCCTGCGCCTTCCCCGCGCCGGTACAAGTGCGAGCCGGAGCCTGCTGAGGGGAGTCATACCGAGGGGGCGCTACCCCCAAACAACGACAAGGGGGTCAAGACGCCCGTTAAAGAAGAGAGCCCTGAGACTAATAGACGCAGTCCTCGGGAAAACAAATGGATGTCAGGAACAGGCAGCTGCGGTTCCCGTGGTCGCGTGACACGCTCCACTAGACTGCGGGAGCATCGTATGTCTAACATGACGGTTTCCGTCACACCGGCTCCGCCTCCTGGACCTGTACCGATCTTGCCCGGCGCTGTTATCAGCCCTAATGATCCGTTGGCCAAATACATGTGTCACATTTGCGGACGTGGTGATGTAGAAGAACAGATGCTGCTGTGTGATGGTTGTGATGACTCGTACCACACATTCTGTCTGCTGCCGCCCTTAGCGGACGTGCCCAAAGGCGACTGGCGGTGCCCTGTATGTTTGGCTGAAGCGGTATCAAAACCAACGGAAGCCTTCGGATTTGAGCAAGCTACCCGAGAGTACACTCTTCAGCAATTCGGAGAAATGGCAGATCAATTCAAATCAGACTACTTCAACATGCCAGTACACATGGTACCAACGTCAACAGTTGAAAAGGAGTTTTGGCGCGTTGTGTCTTCTATCGATGAGGATGTTACGGTGGAGTACGGAGCAGATCTACACTCCATGGATCATGGATCTGGTTTCCCAACAAAGTCCAGCGCTCATCTCTACCCCGGAGAGCAACAGTATGCAGAATCCAGTTGGAATCTCAATAACTTACCGGTCTTGGAAGGATCTGTGCTAGGGCATATCAACGCTGACATATCTGGCATGAAGATACCGTGGCTGTATGTCGGCATGTGCTTTGCCACGTTCTGCTGGCACAATGAAGATCACTGGAGCTATTCCATAAACTACCTACATTGGGGAGAACCGAAGACTTGGTATGGAGTGCCAAGCTCCAAAGCGGAACAGTTTGAAGCAGCCATGAAGGCAGAGGCACCTGAGCTGTTCCAATTACAGCCAGATCTTCTTCATCAGCTCGTCACCATCATGAATCCCAATGTTCTGATGAAAGCTGGCGTTCCGGTATACAGATTGGACCAGAACGCTGGTGAATTTGTGATCACGTTCCCGCGGGCCTACCACGCGGGATTCAATCAGGGATATAACTTCGCGGAAGCAGTCAACTTCACCCCCGCTGACTGGTTAAAAATGGGTCGAGAATGCGTACTACACTACTCAACTCTCCGTCGTTATTGCGTTTTCTCCCACGATGAGTTGGTTTGCAAGATGGCGCTCGAAGCGGATACCCTCAGCTTGACTGTGGCCCTGGCGGCCTATCGGGATATGAGGACCATGCTACATACTGAACGGAAGCTTAGGAAGAATATCTTGCACTGGGGGGTAACAGAAGCGGAGCGCGAAGCTTTTGAGCTTCTTCCCGATGACTCGAGGCAATGTGTGTCGTGCAAAACAACGTGCTTCCTGTCGTGCGTCACGTGTCCTTGTACGCCGCACGTAGCTTGTCTGCGACATGCAGCATTATTGTGTAGCTGTGCGCCTCACGTACACCGTCTGAGGTACCGGTATACCCTAGATGAGCTGCCAGCAATGCTGGAGAAGTTAAAGAAGAAGTCAGAACAGTTCCGCGAATGGGCGGAAGCGGTTCAGAACGCATTGGATCCTGACACGCCCAAGACATGTGACCTGGATGGACTTAGAACACATTTGCAGAGAGCTACTGAGCTCAAGATGCAAAAAACCGAGCTAGTCCGCGCCCTAGAAACGGCAATCGAGGATGCAGAGAAATGTGCCTCCGTCATCCAGCAGCTAGACTTGAATAAGATGCGAACCAGGACTCGTCACCACGACCCCAAGTACCGACTGTCTATCCACGAGCTAACTCTCTTCGCGGCGGAGATTGACAGTCTGGCTTGCGTGTTACCAGAAGGGTCTGCTGTAAAAGAAGTACTACGTCAGACTTCAGAGTTCGAGACACGATCATCTGAACTGCTCAACAAAGACTTGGAGAAGATCGAGACGTCTTATGTTAGGGAATTGGAAGAGACGGTGGAATTAGGCAGTCGTCTCTGCATAGTCCTACCACACCTGGAAGCGGTAACAGTCCGGTTAGCACAAGCGCGTTGGCTGGAGAACTCACAACATCATCGAGATAACTGCAATTCTCTAACTCCTGCTACCCTGAGGTCACTACTGGCCAAGTCGGAAGAGCTGCTCCCTCATATAGCCATAGAGAAGGAAAGAGCTATACTCTACAAACTGCAAGCCGAAGTAGAAGATTGGGAGAAGCGTGCCCAAGAAGTCCTAGTAGACGGAAGCAAGCCTTTTGATGACGACAACCCTAAGTACAACACTATAGAAGAACTAACACAGCTACTGTCTGACGGTGGCGAGATCGATGCTGCTTTACCATCCTACCACACTTTGCAGACAGCCATCACACATGCTAAGGACTGGCTGAATAAGGTTGAAGAGATGCAGTCGAAAGATCTATACCCATACATGCACAGTGTTGAAACCCTGGTCAAGAAGAGTCAGCAGCTTCCGTTAGCGCTTCTGGAGAAGCATCAGCTGGCATGTGCTCTTCACTCGGCGCGAGAGTGGCAGCGTGGCGCAGCAGAGATGTTCCTCAAGCGAGTGCCGCAGCACGAGAAAAAGAACATGCCACACACGTTACTAGAAGCCCTTTCTCCCCGTACTACCCCCTCGGGCGGTCGGCGTCGTACCCAACCATCGTTGGAAACCACTCTATTCTTAGACAAGTTCAATGAAGAATCTACTCCAACGGAGATCGTAGCAGCTTTCAAACAAGCTGAGACACGGGAACTACAGGCTATCAAGGAACTCAGAACTCGCAATATGCGTAAAGATGTGCGTGCGCTGCCTGCAACGACTGTCACATTCTGTATCTGTCAGAAGCGGCAATATGGCGTGATGACGCAATGTGAGCTGTGCAAGGATTGGTTCCACGCATCCTGCATCGCAAACGCTCGAGATGATCGCGAAGAGTCACCTGACCGCGATGGTTTCCCCAGCAGCGAGTCTAAGTTCCTCTGTCCCGAGTGCGTGAGGACCAAACGACCTCGCTTGGACAGAATCCTGGCTTTACTTGTATGGCTACAGAAGCTCCCCGTTCGACTGGCCGAAGGAGAAGCACTACAGTGTGTGACAGAGCGAGCTATGGCGTGGCAGGACCAAGCCCGCGCGATGCTAACTCAGCCGCATCAGCCCACTCATCACAAACCTGCAAGTAGGGAGAAAGCTGATAAGCTGAACGCAGAATTAAAAAAAGCGACTGGCCGAGGTCATGACAGCGCGTCGCAAAATCCAAGATCTTCAGCGTCGGTTGAACACGCGTACAGTGCCACTCCAAGATCGCCTGGCGCTAGGCTTCCACCGGCAGCACTTCAGAAACTTGAAGATTTGATGCTGGAGGGAGATTTACTTGAGGTGGTTTTAGAAGAGCAGCAACAGGTCTGGGAGGCAGTTAGCACCGCCCGCGGGGCTGCGGGGAGGCGGGGAGCGCGGGTGCTCGACGCCGGCCGCAGGAAGAGACATCGCAATACACCACGTCCGCATCAAGCCAAGCGCACCCGCCAGGCAAGGCACACGCAGGCTGGACAAGCTGCACCGTCAACATCTGCAACAGCTTCGTCGTCAGTGAAGCCGACGTCTTCCAAACGCGGAGGAACCACCAATTATCTTAACAGGAAACAGGGTCTATCTTCTGCATCAGGCCTGATGATGCGTAAGCACTACATGGCAAGACAGGAACGTCGTAAACGAGGCGTTTCCACCAGACATAGAGGTTCTACCAGAGGCGGAGCTAGCACATCCTCAGCGCGGATGGCTCAGGCGCAGGAGAGCAGTTCCTCATCCATGTCCTCAGCTGAGGACGAGGACGATTGCGTAGCCGCCAACTGTCTGCGCCCCACGGGCAAAGAAGTGGATTGGGTGCAATGCGACGGCGGCTGCGATGGCTGGTTCCACATGCATTGTGTCGGCCTCGTCAAGGGCACACTGGGAGAGAACGATGACTATGTCTGCGGTACTTGCGCAAGAGACAAGCAATGA
Protein Sequence
MGKCDETNVEVNMGDSASPMKPDNFTFTPPPEAPVFEPTAEEFLDPLAYISKIRPIAEMSGICKIKPPAHWQPPFGVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVLKIPTVERKPLDLYALHKVVKEAGGFEVCSAERKWSKIARRMGHPQGKGIGSILKNHYERILYPYDVFKSNGAVGDNKETKIEVKREPTPDGAGAGPRARSASKCPPATPPPAPSPRRYKCEPEPAEGSHTEGALPPNNDKGVKTPVKEESPETNRRSPRENKWMSGTGSCGSRGRVTRSTRLREHRMSNMTVSVTPAPPPGPVPILPGAVISPNDPLAKYMCHICGRGDVEEQMLLCDGCDDSYHTFCLLPPLADVPKGDWRCPVCLAEAVSKPTEAFGFEQATREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEKEFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYAESSWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRLDQNAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECVLHYSTLRRYCVFSHDELVCKMALEADTLSLTVALAAYRDMRTMLHTERKLRKNILHWGVTEAEREAFELLPDDSRQCVSCKTTCFLSCVTCPCTPHVACLRHAALLCSCAPHVHRLRYRYTLDELPAMLEKLKKKSEQFREWAEAVQNALDPDTPKTCDLDGLRTHLQRATELKMQKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLSIHELTLFAAEIDSLACVLPEGSAVKEVLRQTSEFETRSSELLNKDLEKIETSYVRELEETVELGSRLCIVLPHLEAVTVRLAQARWLENSQHHRDNCNSLTPATLRSLLAKSEELLPHIAIEKERAILYKLQAEVEDWEKRAQEVLVDGSKPFDDDNPKYNTIEELTQLLSDGGEIDAALPSYHTLQTAITHAKDWLNKVEEMQSKDLYPYMHSVETLVKKSQQLPLALLEKHQLACALHSAREWQRGAAEMFLKRVPQHEKKNMPHTLLEALSPRTTPSGGRRRTQPSLETTLFLDKFNEESTPTEIVAAFKQAETRELQAIKELRTRNMRKDVRALPATTVTFCICQKRQYGVMTQCELCKDWFHASCIANARDDREESPDRDGFPSSESKFLCPECVRTKRPRLDRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDQARAMLTQPHQPTHHKPASREKADKLNAELKKATGRGHDSASQNPRSSASVEHAYSATPRSPGARLPPAALQKLEDLMLEGDLLEVVLEEQQQVWEAVSTARGAAGRRGARVLDAGRRKRHRNTPRPHQAKRTRQARHTQAGQAAPSTSATASSSVKPTSSKRGGTTNYLNRKQGLSSASGLMMRKHYMARQERRKRGVSTRHRGSTRGGASTSSARMAQAQESSSSSMSSAEDEDDCVAANCLRPTGKEVDWVQCDGGCDGWFHMHCVGLVKGTLGENDDYVCGTCARDKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00632545;
90% Identity
iTF_01428833;
80% Identity
-