Tele048727.1
Basic Information
- Insect
- Theocolax elegans
- Gene Symbol
- -
- Assembly
- GCA_026168455.1
- Location
- CM047427.1:70544720-70563308[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.00026 0.098 15.1 0.8 1 21 419 439 419 440 0.95 2 13 0.00058 0.22 14.0 3.9 2 20 458 476 458 477 0.94 3 13 0.0036 1.3 11.5 2.1 1 23 486 509 486 509 0.94 4 13 0.025 9.1 8.9 0.0 1 19 572 590 572 590 0.96 5 13 0.0059 2.2 10.8 6.4 1 23 651 673 651 674 0.95 6 13 0.00081 0.3 13.6 5.6 1 21 713 733 713 734 0.96 7 13 1.3e-06 0.0005 22.3 0.9 1 23 742 765 742 765 0.94 8 13 0.0024 0.9 12.1 1.0 1 21 795 815 795 816 0.95 9 13 0.012 4.3 9.9 0.9 1 23 827 850 827 850 0.97 10 13 0.066 24 7.6 7.0 1 23 857 880 857 880 0.98 11 13 0.00081 0.3 13.6 3.1 1 19 899 917 899 919 0.96 12 13 3.3 1.2e+03 2.2 3.1 2 23 930 952 929 952 0.94 13 13 0.007 2.6 10.6 4.6 1 20 982 1001 982 1003 0.95
Sequence Information
- Coding Sequence
- ATGGTACGAAGGACTAAACGCGCACAGCCAGTGCCATTGGAAACGATGAGGGCAGCTCTAGCTGCTTTAAATCAAGGAATGTCGCTACGAAAAGCAGCTAAGCAATTTGGTATTACGAAATCAACGTTACAACGTATCAAGTCTCAACAGCGTACCAATGCAGACGGAGGATTCGTTGCCACTGTTAAATTAGAAATTACTGAATGTTTACATTTACAGATACTGCAAGAGATACAATATCTAATATTAAATAATTCAGTTTTTGTTACAGATTATCATGAGACCGGTGTGCATGATAATTACGAATTTCAAGACTTTTACGAATTACCGCCCACCGATCCAATGCAAGATGAAATTCCTGTCGTTGGGCCTTACGGGAAACGTACGAAACCAATATACATGAAAACTTTTAATCGAGCGATACAGTTGATGAATGCAGGAGCATCGTTACGAAAGGCTGCCAATGATATCATTCACATTATAAATTCACAAGTTTTCGATGGCGATATCAAAGCAGAAATTTTTGCTAAGAAGATTGTCAGTGATGTTAAACCCGAAGATATTATCATTAAAGAAGAACTCATTGAAATTAACGACGACAAGAATATTACGAATCAAGAATATGGAAATAGTAAAAAGGGAATTTCAGACTTTGAAATTCTAAATATTAAACAAGAATTTAGTCAAGAAGAATGTGATGACGTTTCGATAAATGACAATAATGAATTAGATAATGTAGCTATGCGCATTTCGAAGGACGATAAAAATAAGAAAGAAATGAAAAAAACACCTAAAAAAGTAAACATTGAATTAAGTGACGCATTACAAAATATACAAGACATACTTAACATTCAGGAAGATGACAATGATTTTGATAATGACAGTGATGAAGACGTAGACACGGATAATGACTTAGTACCTAATCGACCACTCAATCAAATAGCGATGGATGGTGCATACGAAATGTCACGAAGACGAGCTATAATAATCGGTCAAATATTAATTCCTCCTAAACCATCAACGACTATTAAATCGAAAGATATACATAAAAAACCTCAGTATCGTATGACTGCCAATTTGAGAATGGCTCTCGAAGCGGTTGAAAAGGGTGTATCTCGCGACACAGCTGCAAAGACATATGGAGTGACAAAAGAACGGCTTGAAAATGTCTTAAAAATGGAGCAGTTGTACCCGTCATTTAAAGCACATCGTCAACATCATCCAAGGCAACGCAGATCTCGAGGTCTTGGTCGTTACGCTTGTGAAAAATGTGATCGACGGTACTACGAATTGAAGAATTTGAAGAGACATATAAAACAAGAATGCGAGTATAAATACTTGCACGGTAGCAGTGGTGGCGGGAGCGGCAACGTTTGTTTAACCTGTGGCAAGGCTTACAAACACAAGCATCATTTAAAACGTCACCGGGACTTTGAATGTGGAGTTGAACCAAAATTCAATTGTGTTTACTGTCCGCACAAGACGCGCTACAAGGACAGTCTAATGAAACACATTTTGGCCAGGCACGAACGAATTTGGAATcaagaacagcaacagcaacaacagcagcaatatttcgaaagtagcgccagcgattttgaATCCACTATGCAGATTCAATTGGGATGCTTCATTGACGAGTTCTTGTCGATAACCTATCCAGAAACGCAGCTTAAAGAAATATCTTTTCATCGACGTTTACGTACTCACAAATATTCCTGTGCCGATTGTGGACGTTCCTATGGTCTTCGGAATGCACTTGCTCGCCATTGCCTTTACGAGTGCAGTCGAGGACAACAGCAACGACAATATCAGCAGCAAGATGTTCAACAATCGAGAAGAATCGCTGGTGGCAAAAAGTCAACTAAACGTCCGTTCCTCAATTTCCACAAAGTTGCTAAGAATTCATCGACCAAGAGTAAATTGAAAAAAGTCGAATTGCAATCAAAATTCCATTGCAGTATGTGTTCCGCTAGATTCACGCAAAATATTGAATTGAGACGACACTTGTTGCATCATCATTTTATTTACGGTGAATATATCACAGTAGGAACAACAACGACGATGTCAATGGCAGTGTCATCGAGACAAGAGAATGCGAATCCTCCATTGCAGTGTCGTAATGTCATCAAACCGTACACCTGCAACAAATGCCATCGTGTTTACCAGTCGAAACACAGTTTGAAGAAACATCTTAAGTTTGAATGTGGTGGATTGAAAACATTTGCTTGCGACATGTGTGATAAAAGCTTTACTCAAAATGTCAGCCTTCGTCGACATCTACTTCAATATCATAAAATTTATCGTCCTCCATTAAAATCATGTTTTACATTGAGCTACCACGGTGCAGGGAAGAAATGGTCTGTGATTAGAAGTCAACCACACGTATGTCCACATTGCCGTGCGAGTTTCCAGTTGAAAGCTTTGTTGAAACGTCACATCCAATTCACCTGCAAAATGAATCCACGTGCCTCCGTCTTCCAATGCAATCTTTGTACCTATAAGAGTATGTACAAGGCTAATGTCGAGCGTCACGTTCGCAATGTTCACGATCGAGGTAGTGTTAAATTTAGGTGCAATCTTTGCAACTTCCGTAGCAAGTATACCTCCTGTGTACGCAGGCATATGAAGACTTTTCACGAGCAGAATTCTATGCAAGGGTCTTATAACTACTACAACTTGGACCAGCGAGCTCACGTTTGTCCAGATTGTGGGAAATCGTACACGGTTCACAGGTCACTTTGGAGGCATTGTAAATTCGAGTGCATCAATGCAAAACCTAAGTTAAAATGTGATTATTGCCCGTATCAGAGCCCGCACAAATGGTGCATAGATAGTCATAAACGCAGGGTTCATAACAAGAGTCGACTAACCGCTCGATGTCTCTTTGCTTTTGTGGTTGCAGCGTTCCGCAAGACCTACGTAGGCGAACATATGCTTGGATACACGTGCACCAAGTGCAGCAAATTCTACAAGATGTGGAGCAACTACCTGAAACACAAGTGCGAGCCACCCCAGTTCAAGTGTTCTCTGTGTCCATTCGCAGCATTTAAAGCCTTCATTCTTCACGCTCATCAGGCGGAACAGCACTTCAAGGTCTCGACGTCTAATACGTGA
- Protein Sequence
- MVRRTKRAQPVPLETMRAALAALNQGMSLRKAAKQFGITKSTLQRIKSQQRTNADGGFVATVKLEITECLHLQILQEIQYLILNNSVFVTDYHETGVHDNYEFQDFYELPPTDPMQDEIPVVGPYGKRTKPIYMKTFNRAIQLMNAGASLRKAANDIIHIINSQVFDGDIKAEIFAKKIVSDVKPEDIIIKEELIEINDDKNITNQEYGNSKKGISDFEILNIKQEFSQEECDDVSINDNNELDNVAMRISKDDKNKKEMKKTPKKVNIELSDALQNIQDILNIQEDDNDFDNDSDEDVDTDNDLVPNRPLNQIAMDGAYEMSRRRAIIIGQILIPPKPSTTIKSKDIHKKPQYRMTANLRMALEAVEKGVSRDTAAKTYGVTKERLENVLKMEQLYPSFKAHRQHHPRQRRSRGLGRYACEKCDRRYYELKNLKRHIKQECEYKYLHGSSGGGSGNVCLTCGKAYKHKHHLKRHRDFECGVEPKFNCVYCPHKTRYKDSLMKHILARHERIWNQEQQQQQQQQYFESSASDFESTMQIQLGCFIDEFLSITYPETQLKEISFHRRLRTHKYSCADCGRSYGLRNALARHCLYECSRGQQQRQYQQQDVQQSRRIAGGKKSTKRPFLNFHKVAKNSSTKSKLKKVELQSKFHCSMCSARFTQNIELRRHLLHHHFIYGEYITVGTTTTMSMAVSSRQENANPPLQCRNVIKPYTCNKCHRVYQSKHSLKKHLKFECGGLKTFACDMCDKSFTQNVSLRRHLLQYHKIYRPPLKSCFTLSYHGAGKKWSVIRSQPHVCPHCRASFQLKALLKRHIQFTCKMNPRASVFQCNLCTYKSMYKANVERHVRNVHDRGSVKFRCNLCNFRSKYTSCVRRHMKTFHEQNSMQGSYNYYNLDQRAHVCPDCGKSYTVHRSLWRHCKFECINAKPKLKCDYCPYQSPHKWCIDSHKRRVHNKSRLTARCLFAFVVAAFRKTYVGEHMLGYTCTKCSKFYKMWSNYLKHKCEPPQFKCSLCPFAAFKAFILHAHQAEQHFKVSTSNT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01428184;
- 90% Identity
- iTF_01428184;
- 80% Identity
- iTF_01428184;