Tele048727.1
Basic Information
- Insect
- Theocolax elegans
- Gene Symbol
- -
- Assembly
- GCA_026168455.1
- Location
- CM047427.1:70544720-70563308[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.5e-10 2.5e-07 32.3 0.2 3 38 14 48 14 52 0.94 2 3 2.2 3.6e+03 -0.3 0.1 5 24 137 155 136 156 0.79 3 3 0.0034 5.5 8.8 0.0 4 37 359 391 357 394 0.86
Sequence Information
- Coding Sequence
- ATGGTACGAAGGACTAAACGCGCACAGCCAGTGCCATTGGAAACGATGAGGGCAGCTCTAGCTGCTTTAAATCAAGGAATGTCGCTACGAAAAGCAGCTAAGCAATTTGGTATTACGAAATCAACGTTACAACGTATCAAGTCTCAACAGCGTACCAATGCAGACGGAGGATTCGTTGCCACTGTTAAATTAGAAATTACTGAATGTTTACATTTACAGATACTGCAAGAGATACAATATCTAATATTAAATAATTCAGTTTTTGTTACAGATTATCATGAGACCGGTGTGCATGATAATTACGAATTTCAAGACTTTTACGAATTACCGCCCACCGATCCAATGCAAGATGAAATTCCTGTCGTTGGGCCTTACGGGAAACGTACGAAACCAATATACATGAAAACTTTTAATCGAGCGATACAGTTGATGAATGCAGGAGCATCGTTACGAAAGGCTGCCAATGATATCATTCACATTATAAATTCACAAGTTTTCGATGGCGATATCAAAGCAGAAATTTTTGCTAAGAAGATTGTCAGTGATGTTAAACCCGAAGATATTATCATTAAAGAAGAACTCATTGAAATTAACGACGACAAGAATATTACGAATCAAGAATATGGAAATAGTAAAAAGGGAATTTCAGACTTTGAAATTCTAAATATTAAACAAGAATTTAGTCAAGAAGAATGTGATGACGTTTCGATAAATGACAATAATGAATTAGATAATGTAGCTATGCGCATTTCGAAGGACGATAAAAATAAGAAAGAAATGAAAAAAACACCTAAAAAAGTAAACATTGAATTAAGTGACGCATTACAAAATATACAAGACATACTTAACATTCAGGAAGATGACAATGATTTTGATAATGACAGTGATGAAGACGTAGACACGGATAATGACTTAGTACCTAATCGACCACTCAATCAAATAGCGATGGATGGTGCATACGAAATGTCACGAAGACGAGCTATAATAATCGGTCAAATATTAATTCCTCCTAAACCATCAACGACTATTAAATCGAAAGATATACATAAAAAACCTCAGTATCGTATGACTGCCAATTTGAGAATGGCTCTCGAAGCGGTTGAAAAGGGTGTATCTCGCGACACAGCTGCAAAGACATATGGAGTGACAAAAGAACGGCTTGAAAATGTCTTAAAAATGGAGCAGTTGTACCCGTCATTTAAAGCACATCGTCAACATCATCCAAGGCAACGCAGATCTCGAGGTCTTGGTCGTTACGCTTGTGAAAAATGTGATCGACGGTACTACGAATTGAAGAATTTGAAGAGACATATAAAACAAGAATGCGAGTATAAATACTTGCACGGTAGCAGTGGTGGCGGGAGCGGCAACGTTTGTTTAACCTGTGGCAAGGCTTACAAACACAAGCATCATTTAAAACGTCACCGGGACTTTGAATGTGGAGTTGAACCAAAATTCAATTGTGTTTACTGTCCGCACAAGACGCGCTACAAGGACAGTCTAATGAAACACATTTTGGCCAGGCACGAACGAATTTGGAATcaagaacagcaacagcaacaacagcagcaatatttcgaaagtagcgccagcgattttgaATCCACTATGCAGATTCAATTGGGATGCTTCATTGACGAGTTCTTGTCGATAACCTATCCAGAAACGCAGCTTAAAGAAATATCTTTTCATCGACGTTTACGTACTCACAAATATTCCTGTGCCGATTGTGGACGTTCCTATGGTCTTCGGAATGCACTTGCTCGCCATTGCCTTTACGAGTGCAGTCGAGGACAACAGCAACGACAATATCAGCAGCAAGATGTTCAACAATCGAGAAGAATCGCTGGTGGCAAAAAGTCAACTAAACGTCCGTTCCTCAATTTCCACAAAGTTGCTAAGAATTCATCGACCAAGAGTAAATTGAAAAAAGTCGAATTGCAATCAAAATTCCATTGCAGTATGTGTTCCGCTAGATTCACGCAAAATATTGAATTGAGACGACACTTGTTGCATCATCATTTTATTTACGGTGAATATATCACAGTAGGAACAACAACGACGATGTCAATGGCAGTGTCATCGAGACAAGAGAATGCGAATCCTCCATTGCAGTGTCGTAATGTCATCAAACCGTACACCTGCAACAAATGCCATCGTGTTTACCAGTCGAAACACAGTTTGAAGAAACATCTTAAGTTTGAATGTGGTGGATTGAAAACATTTGCTTGCGACATGTGTGATAAAAGCTTTACTCAAAATGTCAGCCTTCGTCGACATCTACTTCAATATCATAAAATTTATCGTCCTCCATTAAAATCATGTTTTACATTGAGCTACCACGGTGCAGGGAAGAAATGGTCTGTGATTAGAAGTCAACCACACGTATGTCCACATTGCCGTGCGAGTTTCCAGTTGAAAGCTTTGTTGAAACGTCACATCCAATTCACCTGCAAAATGAATCCACGTGCCTCCGTCTTCCAATGCAATCTTTGTACCTATAAGAGTATGTACAAGGCTAATGTCGAGCGTCACGTTCGCAATGTTCACGATCGAGGTAGTGTTAAATTTAGGTGCAATCTTTGCAACTTCCGTAGCAAGTATACCTCCTGTGTACGCAGGCATATGAAGACTTTTCACGAGCAGAATTCTATGCAAGGGTCTTATAACTACTACAACTTGGACCAGCGAGCTCACGTTTGTCCAGATTGTGGGAAATCGTACACGGTTCACAGGTCACTTTGGAGGCATTGTAAATTCGAGTGCATCAATGCAAAACCTAAGTTAAAATGTGATTATTGCCCGTATCAGAGCCCGCACAAATGGTGCATAGATAGTCATAAACGCAGGGTTCATAACAAGAGTCGACTAACCGCTCGATGTCTCTTTGCTTTTGTGGTTGCAGCGTTCCGCAAGACCTACGTAGGCGAACATATGCTTGGATACACGTGCACCAAGTGCAGCAAATTCTACAAGATGTGGAGCAACTACCTGAAACACAAGTGCGAGCCACCCCAGTTCAAGTGTTCTCTGTGTCCATTCGCAGCATTTAAAGCCTTCATTCTTCACGCTCATCAGGCGGAACAGCACTTCAAGGTCTCGACGTCTAATACGTGA
- Protein Sequence
- MVRRTKRAQPVPLETMRAALAALNQGMSLRKAAKQFGITKSTLQRIKSQQRTNADGGFVATVKLEITECLHLQILQEIQYLILNNSVFVTDYHETGVHDNYEFQDFYELPPTDPMQDEIPVVGPYGKRTKPIYMKTFNRAIQLMNAGASLRKAANDIIHIINSQVFDGDIKAEIFAKKIVSDVKPEDIIIKEELIEINDDKNITNQEYGNSKKGISDFEILNIKQEFSQEECDDVSINDNNELDNVAMRISKDDKNKKEMKKTPKKVNIELSDALQNIQDILNIQEDDNDFDNDSDEDVDTDNDLVPNRPLNQIAMDGAYEMSRRRAIIIGQILIPPKPSTTIKSKDIHKKPQYRMTANLRMALEAVEKGVSRDTAAKTYGVTKERLENVLKMEQLYPSFKAHRQHHPRQRRSRGLGRYACEKCDRRYYELKNLKRHIKQECEYKYLHGSSGGGSGNVCLTCGKAYKHKHHLKRHRDFECGVEPKFNCVYCPHKTRYKDSLMKHILARHERIWNQEQQQQQQQQYFESSASDFESTMQIQLGCFIDEFLSITYPETQLKEISFHRRLRTHKYSCADCGRSYGLRNALARHCLYECSRGQQQRQYQQQDVQQSRRIAGGKKSTKRPFLNFHKVAKNSSTKSKLKKVELQSKFHCSMCSARFTQNIELRRHLLHHHFIYGEYITVGTTTTMSMAVSSRQENANPPLQCRNVIKPYTCNKCHRVYQSKHSLKKHLKFECGGLKTFACDMCDKSFTQNVSLRRHLLQYHKIYRPPLKSCFTLSYHGAGKKWSVIRSQPHVCPHCRASFQLKALLKRHIQFTCKMNPRASVFQCNLCTYKSMYKANVERHVRNVHDRGSVKFRCNLCNFRSKYTSCVRRHMKTFHEQNSMQGSYNYYNLDQRAHVCPDCGKSYTVHRSLWRHCKFECINAKPKLKCDYCPYQSPHKWCIDSHKRRVHNKSRLTARCLFAFVVAAFRKTYVGEHMLGYTCTKCSKFYKMWSNYLKHKCEPPQFKCSLCPFAAFKAFILHAHQAEQHFKVSTSNT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01428584;
- 90% Identity
- iTF_01428584;
- 80% Identity
- iTF_01428584;