Tele015194.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Theocolax elegans
Gene Symbol
egg
Assembly
GCA_026168455.1
Location
CM047428.1:61313611-61318021[+]

Transcription Factor Domain

TF Family
MBD
Domain
MBD domain
PFAM
PF01429
TF Group
Unclassified Structure
Description
The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4 3.4e+04 -3.5 0.0 38 54 260 276 259 282 0.78
2 2 4.8e-13 1.2e-08 36.4 0.1 5 70 613 672 610 678 0.84

Sequence Information

Coding Sequence
ATGTCGAAAGTTCAAGAAACAGAAGTCATAGATTTGGATTCGGATGACGATTCAGCAAAAAAGAAAACAAAGAAGAAATTGAATAATTCTAATTGCATCAATTTTAAATGCTCTTCAGGAGTTGATATGAGACGTGCACCTTCCTTTGCATGTTCATTTTTTGGAGTGAACATGACCAAAAAAAAGAAACGTTTCATCTGTAAAATTTGTTTAGATATAGCTCTGGATCATCAGCAGCAACTTGTTTCCGCAGTGTTGGACCATAAACCTATACTCAAGTGTGAATTTCCAGATCATACAATGGAAGTTGAAATTTCTGATAGCGACGAGTCTGATACAGATTCCAAACTTGATGACAATGAATATATATTAGAAAACATACTCTCTGAATTTGAGTTAAAAGTTGATAAATCATTGAATGAAGTATTTGATAAATATGACATAAAGTATCAAATTGAAGAAGCCAAGACTGTGCTAAAATCTCAGTGGGATGCAATTGATGCTGATAATAATGATATTGACAAAGAAATATTAGCTACAATGGTTAAATTAGATAAGCTGCGAACATCGTTGTACAATGAATTTAAACCTACTATTCAAACGTTAGAGGAATTAAAGATTGAGGGAAACGTTGATGTCCCTAATTATCCACTTGTTGCAACAAAGAAAGTAACTCAAGTTCGTCCACAACCCAAAAGTCAACTTCAAGACAATCAACCAGAAATATTGAGAGAAGTTGAAAGAGATAATCGTTTAATTCAATCAATGGATTTGCCACCAACTGGTCAACTAATAAAACCTGTACCAGATGTCGAAGATTTTGTATTTACAATGAAACATCCTTTATTCCCATGGATAAAAGGAAAAGTGCAAACTGTTATTTCAAAATCACCAATGCAGTACAGAATTAAATTATTGCAAAAGAAGTATGCTGGTCAAGTAAAAACATTAACAGGAAAACAAATAGCATCAAATACTCCTAGTGCAGTCATAATTCCTGTTGGTACACGAGTGGTGGCTGTTTTTCAAGATAATTATTCTAGTAATTATTATAGTGGCGTTATTGCAGAACCGCCAAAATCAACAAATAAATATCGATATTTAGTCTTTTTTGATGACGGATATGCTCAGTATGTGAAACACAAGCATATATATTTGGTTTGCGAAAGTTCCCCTCGCGTATGGGAAGATATACCCCTTGAATCTCGTGATTTCGTTAAAAAATATTTGGAAACATATCCAGAACGACCGATGGTAAAATTACAACGTGGTCAAGTTGTTAAAACCGAATGGAATGGAAAATGGTGGATTGCACGAGTCAGAGAAGTCGATGCAAGTCTAGTACAAATGCATTTCGATGCAGACAATAGAACAGAATGGATCTATCGAGGTTCTGCGAGATTAGCACCTTTGTATTTAGAATTAATGAAGGCAAATCTTAGACAGCAAGGATGTCACTCGTCGATAAACACTCCAGGCCGTCATCGTGGTGTAAATGTTGCAAATAAAAATGTACCATATGTAGAATACACATCAACAGCAACTGATGAACGAGATGCCCTTTTATCAGACAAAGAGAAGAGTGTTGAAATTCAAGCAGAAATTACAACTCCTCAACAAACTAGAGCTGTTGCCAAAAAAAGTACTACAAGAAGGCCAAATGTACCCGAACAATCATCTACATCTTTTAATACCAATATGGAAACAAAATCTTCTCACAGTATTGTTTATTATCAAACGCAAAACAAAATTCAAACAAAAAAATTTGTTCCTCATACGTGTGGTCTAAAATGCGTCGAGAACATATCTTTTACACCAGATGATCTGCGTGGATATTCACCTTTATCGATACCTCTATTGTGCGGTTGGAATCGTCAATTGTGTAAATTTCCAAAAGCAAAAAAAGTTATTCTTTACCAAGCACCTTGTGGCGTTCGTTTACGAAATATGGAAGAACTTCATTACTATTTAAGACTGACCAAATGTCCAATGTCTGTAGATTTATTCGAATTCGATTTCTGGGTTCACTGTTTAGCtgaatttgttctcgataaatgtttcgttaatattaaggattTGAGCTACGGTGTAGAAAATGTGCCAATTCCTTGTGTGAATGAAATAGATCATGCTTATCCAGATACAATTAAATACACAACTGAACGTGAACCATCCGAAGATGTACATATGAATTTAGATGCTGATTTCCTTTGTAGTTGCGATTGCGAAGACGATTGTCAAGATAAGAATAAATGTCAGTGCTGGCAATTGACGATACAGGGTGCGACTCTTGGAGGTAGAGTACCAAATGCAGCAGTCGGTTATGTCTATAAAAGATTGCCTGAGGCAGTCACTACTGGAATTTATGAATGTAATTCAAGGTGCAAGTGTTCGGTGAAAACGTGTTTGAATCGAGTGGTTCAACATCCTCTAACACTGAAATTACAAGTATTCAAAACAGCACCAAGAGGATGGGGTATTAGGTGTTTAAATGATATACCACTCGGATCATTTATTTGTATCTATGCTGGCCGACTTCTTACGGAACAAGGAGCCAACGAAGGTGGCAAAAATTATGGCGACGAATATCTTGCGGAACTTGATTACGTCGAAGTAGTTGAAGGAATTAAAGAGGGTTACGAAAGCGATGTTCTTGATCCCGAATTGCAGCTTACTGATCAAGACTCAGATAAAGAGAAGGAAGAGAAAAAACTTGACGAGGATTTCGACTCCAATAAAGAAGTTATAAACGATTCGGATGACGATTTTAGTACGAACAAGTCTAAGAATGCCGAAGAAGATGAAGATTCCGCTTCGTCTATAAGAAGTCGATTGAGAAAACGTAAACAAGGAGAAGAAAATGCAGGAGATGATAAATCGGAAGACGGTAGCACATCGAAGGATGGTCCAGATAAAGCAGGCAGCGATGAAGAAGAGGCTGTTCGCGAACCACGGAAATTTGATCTGACCGTTGATACAGGAAACATCGAAAGAGAGAAATTTAAATCTGTCAGGGACTTTTTCGGAAGAGACGAGGCTGTTTATATAATGGATGCTAAAACAACTGGAAATATCGGCCGCTATTTAAACCACTCCTGCGATCCAAATGTGTTCGTTCAGAATGTATTTGTGGACACTCACGACGTTCGATTTCCTTGGGTGGCCTTCTTTGCGTTAACCTATATTAGAGCAGGTCAGGAATTGACTTGGAATTACAGCTATGACGTAGGGAGTATTCCTGGCAAAGTAATTATTTGTAAATGTGGAGCAAGTAACTGCAGAGGACGATTATTGTAA
Protein Sequence
MSKVQETEVIDLDSDDDSAKKKTKKKLNNSNCINFKCSSGVDMRRAPSFACSFFGVNMTKKKKRFICKICLDIALDHQQQLVSAVLDHKPILKCEFPDHTMEVEISDSDESDTDSKLDDNEYILENILSEFELKVDKSLNEVFDKYDIKYQIEEAKTVLKSQWDAIDADNNDIDKEILATMVKLDKLRTSLYNEFKPTIQTLEELKIEGNVDVPNYPLVATKKVTQVRPQPKSQLQDNQPEILREVERDNRLIQSMDLPPTGQLIKPVPDVEDFVFTMKHPLFPWIKGKVQTVISKSPMQYRIKLLQKKYAGQVKTLTGKQIASNTPSAVIIPVGTRVVAVFQDNYSSNYYSGVIAEPPKSTNKYRYLVFFDDGYAQYVKHKHIYLVCESSPRVWEDIPLESRDFVKKYLETYPERPMVKLQRGQVVKTEWNGKWWIARVREVDASLVQMHFDADNRTEWIYRGSARLAPLYLELMKANLRQQGCHSSINTPGRHRGVNVANKNVPYVEYTSTATDERDALLSDKEKSVEIQAEITTPQQTRAVAKKSTTRRPNVPEQSSTSFNTNMETKSSHSIVYYQTQNKIQTKKFVPHTCGLKCVENISFTPDDLRGYSPLSIPLLCGWNRQLCKFPKAKKVILYQAPCGVRLRNMEELHYYLRLTKCPMSVDLFEFDFWVHCLAEFVLDKCFVNIKDLSYGVENVPIPCVNEIDHAYPDTIKYTTEREPSEDVHMNLDADFLCSCDCEDDCQDKNKCQCWQLTIQGATLGGRVPNAAVGYVYKRLPEAVTTGIYECNSRCKCSVKTCLNRVVQHPLTLKLQVFKTAPRGWGIRCLNDIPLGSFICIYAGRLLTEQGANEGGKNYGDEYLAELDYVEVVEGIKEGYESDVLDPELQLTDQDSDKEKEEKKLDEDFDSNKEVINDSDDDFSTNKSKNAEEDEDSASSIRSRLRKRKQGEENAGDDKSEDGSTSKDGPDKAGSDEEEAVREPRKFDLTVDTGNIEREKFKSVRDFFGRDEAVYIMDAKTTGNIGRYLNHSCDPNVFVQNVFVDTHDVRFPWVAFFALTYIRAGQELTWNYSYDVGSIPGKVIICKCGASNCRGRLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00968824;
90% Identity
-
80% Identity
-