Basic Information

Insect: Thelaira solivaga
Gene Symbol: -
Assembly: GCA_947397855.1
Location: OX377614.1:38561648-38567910[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0086 0.53 11.1 1.1 3 23 29 50 28 50 0.89

2 16 0.0043 0.26 12.0 1.4 2 23 59 81 58 81 0.95

3 16 8.9e-05 0.0054 17.3 2.9 1 23 88 111 88 111 0.93

4 16 2.5e-06 0.00015 22.2 1.7 1 23 117 139 117 139 0.98

5 16 9.1e-06 0.00055 20.4 0.9 1 23 145 168 145 168 0.97

6 16 9 5.5e+02 1.6 0.1 14 23 227 236 223 236 0.86

7 16 4.7e-06 0.00028 21.4 1.2 3 23 244 265 242 265 0.93

8 16 0.0058 0.35 11.6 0.8 2 23 274 296 273 296 0.96

9 16 4.2e-05 0.0025 18.4 1.8 1 23 303 326 303 326 0.93

10 16 1.3e-05 0.00078 20.0 0.5 1 23 332 354 332 354 0.98

11 16 9.1e-06 0.00055 20.4 0.9 1 23 360 383 360 383 0.97

12 16 7e-05 0.0043 17.7 5.2 2 23 469 490 468 491 0.93

13 16 0.065 4 8.3 0.2 2 23 503 525 502 525 0.96

14 16 0.016 1 10.2 2.2 1 22 532 553 532 555 0.89

15 16 8.9e-06 0.00054 20.5 0.9 1 23 561 583 561 583 0.98

16 16 1.7e-05 0.001 19.6 4.6 1 23 589 612 589 612 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0086	0.53	11.1	1.1	3	23	29	50	28	50	0.89
2	16	0.0043	0.26	12.0	1.4	2	23	59	81	58	81	0.95
3	16	8.9e-05	0.0054	17.3	2.9	1	23	88	111	88	111	0.93
4	16	2.5e-06	0.00015	22.2	1.7	1	23	117	139	117	139	0.98
5	16	9.1e-06	0.00055	20.4	0.9	1	23	145	168	145	168	0.97
6	16	9	5.5e+02	1.6	0.1	14	23	227	236	223	236	0.86
7	16	4.7e-06	0.00028	21.4	1.2	3	23	244	265	242	265	0.93
8	16	0.0058	0.35	11.6	0.8	2	23	274	296	273	296	0.96
9	16	4.2e-05	0.0025	18.4	1.8	1	23	303	326	303	326	0.93
10	16	1.3e-05	0.00078	20.0	0.5	1	23	332	354	332	354	0.98
11	16	9.1e-06	0.00055	20.4	0.9	1	23	360	383	360	383	0.97
12	16	7e-05	0.0043	17.7	5.2	2	23	469	490	468	491	0.93
13	16	0.065	4	8.3	0.2	2	23	503	525	502	525	0.96
14	16	0.016	1	10.2	2.2	1	22	532	553	532	555	0.89
15	16	8.9e-06	0.00054	20.5	0.9	1	23	561	583	561	583	0.98
16	16	1.7e-05	0.001	19.6	4.6	1	23	589	612	589	612	0.98

Sequence Information

Coding Sequence: ATGTTCCGCATCGATGATAGATGGCCATCCAAAGCTAAACTTCAAAAACACATGTATTGTCATGATACAAATAGACAAAAAATATGCGATCAGTGTGGTAAAACATTTGCCTGCAATTCCAGTATGCGTAAGCACGTTGATGCTGAGCATTCAGAAGTTAAACCAGAACCACAACAGTGTAAAATATGCAGCACTTGGTATCGAAATAATTCTGGTTTAAGGACGCACATGAAATTTATGCATGAAAATATTGGCGGAGAACATCGTTGTCACATTTGCAACAAGGTATCAACAAATGCTAGAGCATTAAGAAGACATATTTATTTAAATCATGAATGTGAACGAAAATACAAATGTCACATGTGTGAAAAGGCATTTAAACGGGAACAAGATTTGAGAGAACATATATCGGTGCATACTGGCGAGGCATTATACACTTGCCCCAATTGTCCCATGACATTTTCCTCTAGTGCCAATATGTATAAGCATCGGCAACGTTTGCATAAAGCCGAGTATGCTGCCCATAAACAACAGCCATTGGCTTTAAATATAATCAAACAAGCAAAATCTGTACCGAATACAGTGCGTACTAAAAGACGTATGATTGTAGAACCCCCGCCACCCTCTGCAGAATTGTTAAATCCTCAGCTCTCTTTACAAATACAATTACCATCTGAAACAAAGCTACGTGAACACATGAATAGTCATGATCCAACAAAACGTCAGATATGTGATAAATGTGGTAAAACATTTAAAAATAATTACAATATGAAAAAGCATGAAGAATCAGAACATTCTGAGGTAAAACCTGAACCTCAACAGTGTACCATTTGTAATACATGGTACCGCAACATATCTGGTTTAAAGACCCACATGAAAAACATGCACGATGATGCTGGCCAAGAGCATCGGTGTGATATATGTAATAAAGTGTCTACTACTCAACGTGCCCTTAAGAGACATATTTATTTAAATCATAAATGTGAAAAGAAATTTAAGTGTAATATGTGTGACAAGGCTTTTAAGAGAGGTCAAGATTTAAGAGAACACGTATCTGTGCATACTGGAGAAGCCTTATACACTTGTCCCAATTGTCCTATGACCTTTTCTTCCAGTGCCAATATGTACAAACATCGTCAGCGTTTACACAAAATTGAATATGCTGCCTATAAACTACAAGCCATGCCTCCTAATATAATAAAACAAGCTAAATCGAGTTCTGTCAGCACATTTCGTTCCAAAAAACGCTTTGTGCGCCAGTCAAATACTGAATCTTATGAAAATTTATTGGTAATTTCACCCGAAAACAGTACCACTTTACATATGCCAATAAGTACCAGTTTATTTCCCACCAAGCGCAAAGTTGCAGCTCATTTACATGTTCACAGTACAGTATGCACTTGCATGTGTGATGTTTGCGGCAACACGTTCAAAAATAAATTTAATCTTAAAAAGCATATTGAATATCATCATTCAGAAAATCCTCGTAGAGATAAGGAACCCCAACAGTGTCCCACTTGCTCCAAAGTGTTGCTGGGAAATAAGGGACTGAGGGCACACATGAAGAATATACATGACACCGCTAAACAGGAGCATCGTTGTAAAATTTGTAATCATGTTTCTACAACAGCTAAAGGCTTACGTGTACACGAAATATTTCGTCACGAAAAAGAACGCAAGCACAAGTGCTCCTTGTGTGAGAAGGCATTTAAAAGGCCCTTGGATTTGAAAGAACATATTGCTACACACACTGGCATCTCCTTGTATAAATGCCCTGAATGTGAAGCCACATTTAAGTCAAATTCTAATTATTATCACCATCGAAGACGTTTTCATAGTGAAAAACCCAAAAGCGATTTAATGATTAAAATAGATTGA
Protein Sequence: MFRIDDRWPSKAKLQKHMYCHDTNRQKICDQCGKTFACNSSMRKHVDAEHSEVKPEPQQCKICSTWYRNNSGLRTHMKFMHENIGGEHRCHICNKVSTNARALRRHIYLNHECERKYKCHMCEKAFKREQDLREHISVHTGEALYTCPNCPMTFSSSANMYKHRQRLHKAEYAAHKQQPLALNIIKQAKSVPNTVRTKRRMIVEPPPPSAELLNPQLSLQIQLPSETKLREHMNSHDPTKRQICDKCGKTFKNNYNMKKHEESEHSEVKPEPQQCTICNTWYRNISGLKTHMKNMHDDAGQEHRCDICNKVSTTQRALKRHIYLNHKCEKKFKCNMCDKAFKRGQDLREHVSVHTGEALYTCPNCPMTFSSSANMYKHRQRLHKIEYAAYKLQAMPPNIIKQAKSSSVSTFRSKKRFVRQSNTESYENLLVISPENSTTLHMPISTSLFPTKRKVAAHLHVHSTVCTCMCDVCGNTFKNKFNLKKHIEYHHSENPRRDKEPQQCPTCSKVLLGNKGLRAHMKNIHDTAKQEHRCKICNHVSTTAKGLRVHEIFRHEKERKHKCSLCEKAFKRPLDLKEHIATHTGISLYKCPECEATFKSNSNYYHHRRRFHSEKPKSDLMIKID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01427952;
90% Identity: iTF_01427952;
80% Identity: iTF_01427952;