Basic Information

Insect: Thelaira solivaga
Gene Symbol: SKP1
Assembly: GCA_947397855.1
Location: OX377612.1:31464957-31473883[+]

Transcription Factor Domain

TF Family: BTB
Domain: zf-C2H2|ZBTB
PFAM: PF00651
TF Group: Zinc-Coordinating Group
Description: The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.068 22 5.5 0.0 37 71 27 61 25 89 0.80

2 12 0.068 22 5.5 0.0 37 71 137 171 135 199 0.80

3 12 0.068 22 5.5 0.0 37 71 247 281 245 309 0.80

4 12 0.068 22 5.5 0.0 37 71 357 391 355 419 0.80

5 12 0.068 22 5.5 0.0 37 71 467 501 465 529 0.80

6 12 0.068 22 5.5 0.0 37 71 577 611 575 639 0.80

7 12 0.068 22 5.5 0.0 37 71 687 721 685 749 0.80

8 12 0.068 22 5.5 0.0 37 71 797 831 795 859 0.80

9 12 0.068 22 5.5 0.0 37 71 907 941 905 969 0.80

10 12 0.068 22 5.5 0.0 37 71 1017 1051 1015 1079 0.80

11 12 0.068 22 5.5 0.0 37 71 1127 1161 1125 1189 0.80

12 12 0.068 22 5.5 0.0 37 71 1237 1271 1235 1299 0.80

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.068	22	5.5	37	71	27	61	25	89	0.80
2	12	0.068	22	5.5	37	71	137	171	135	199	0.80
3	12	0.068	22	5.5	37	71	247	281	245	309	0.80
4	12	0.068	22	5.5	37	71	357	391	355	419	0.80
5	12	0.068	22	5.5	37	71	467	501	465	529	0.80
6	12	0.068	22	5.5	37	71	577	611	575	639	0.80
7	12	0.068	22	5.5	37	71	687	721	685	749	0.80
8	12	0.068	22	5.5	37	71	797	831	795	859	0.80
9	12	0.068	22	5.5	37	71	907	941	905	969	0.80
10	12	0.068	22	5.5	37	71	1017	1051	1015	1079	0.80
11	12	0.068	22	5.5	37	71	1127	1161	1125	1189	0.80
12	12	0.068	22	5.5	37	71	1237	1271	1235	1299	0.80

Sequence Information

Coding Sequence: ATGCCCAATTTTAAAATAAAAACAAAAGACGAAAAAATTGTTGAAGTTGATACAGAAATAGCCAAAAAGTGGGGCATAATAAAGAATATGTTGGAAGACCTCGGCATGGAAGAGGATAAGAACTCTGTAATACCATTGCCAAACGTAGAATCTGACATTTTATCTAAGATTATGGAATGGTCAAATTATCACAAAAATGATGATGAAAACGATGAGACATCTTTAGAAGAGAGCAAGTGGGATGTAACATTTTTTGACATAAAGAGAAAAACGGCAAGAAATCTTAAGAAACAATTTCAATACGAAAACACACAAAGATCACCAATCAACATGCCCAATTTTAAAATAAAAACAAAAGACGAAAAAATTGTTGAAGTTGATACAGAAATAGCCAAAAAGTGGGGCATAATAAAGAATATGTTGGAAGACCTCGGCATGGAAGAGGATAAGAACTCTGTAATACCATTGCCAAACGTAGAATCTGACATTTTATCTAAGATTATGGAATGGTCAAATTATCACAAAAATGATGATGAAAACGATGAGACATCTTTAGAAGAGAGCAAGTGGGATGTAACATTTTTTGACATAAAGAGAAAAACGGCAAGAAATCTTAAGAAACAATTTCAATACGAAAACACACAAAGATCACCAATCAACATGCCCAATTTTAAAATAAAAACAAAAGACGAAAAAATTGTTGAAGTTGATACAGAAATAGCCAAAAAGTGGGGCATAATAAAGAATATGTTGGAAGACCTCGGCATGGAAGAGGATAAGAACTCTGTAATACCATTGCCAAACGTAGAATCTGACATTTTATCTAAGATTATGGAATGGTCAAATTATCACAAAAATGATGATGAAAACGATGAGACATCTTTAGAAGAGAGCAAGTGGGATGTAACATTTTTTGACATAAAGAGAAAAGCGGCAAGAAATCTTAAGAAACAATTTCAATACGAAAACACACAAAGATCACCAATCAACATGCCCAATTTTAAAATAAAAACAAAAGACGAAAAAATTGTTGAAGTTGATACAGAAATAGCCAAAAAGTGGGGCATAATAAAGAATATGTTGGAAGACCTCGGCATGGAAGAGGATAAGAACTCTGTAATACCATTGCCAAACGTAGAATCTGACATTTTATCTAAGATTATGGAATGGTCAAATTATCACAAAAATGATGATGAAAACGATGAGACATCTTTAGAAGAGAGCAAGTGGGATGTAACATTTTTTGACATAAAGAGAAAAACGGCAAGAAATCTTAAGAAACAATTTCAATACGAAAACACACAAAGATCACCAATCAACATGCCCAATTTTAAAATAAAAACAAAAGACGAAAAAATTGTTGAAGTTGATACAGAAATAGCCAAAAAGTGGGGCATAATAAAGAATATGTTGGAAGACCTCGGCATGGAAGAGGATAAGAACTCTGTAATACCATTGCCAAACGTAGAATCTGACATTTTATCTAAGATTATGGAATGGTCAAATTATCACAAAAATGATGATGAAAACGATGAGACATCTTTAGAAGAGAGCAAGTGGGATGTAACATTTTTTGACATAAAGAGAAAAACGGCAAGAAATCTTAAGAAACAATTTCAATACGAAAACACACAAAGATCACCAATCAACATGCCCAATTTTAAAATAAAAACAAAAGACGAAAAAATTGTTGAAGTTGATACAGAAATAGCCAAAAAGTGGGGCATAATAAAGAATATGTTGGAAGACCTCGGCATGGAAGAGGATAAGAACTCTGTAATACCATTGCCAAACGTAGAATCTGACATTTTATCTAAGATTATGGAATGGTCAAATTATCACAAAAATGATGATGAAAACGATGAGACATCTTTAGAAGAGAGCAAGTGGGATGTAACATTTTTTGACATAAAGAGAAAAGCGGCAAGAAATCTTAAGAAACAATTTCAATACGAAAACACACAAAGATCACCAATCAACATGCCCAATTTTAAAATAAAAACAAAAGACGAAAAAATTGTTGAAGTTGATACAGAAATAGCCAAAAAGTGGGGCATAATAAAGAATATGTTGGAAGACCTCGGCATGGAAGAGGATAAGAACTCTGTAATACCATTGCCAAACGTAGAATCTGACATTTTATCTAAGATTATGGAATGGTCAAATTATCACAAAAATGATGATGAAAACGATGAGACATCTTTAGAAGAGAGCAAGTGGGATGTAACATTTTTTGACATAAAGAGAAAAACGGCAAGAAATCTTAAGAAACAATTTCAATACGAAAACACACAAAGATCACCAATCAACATGCCCAATTTTAAAATAAAAACAAAAGACGAAAAAATTGTTGAAGTTGATACAGAAATAGCCAAAAAGTGGGGCATAATAAAGAATATGTTGGAAGACCTCGGCATGGAAGAGGATAAGAACTCTGTAATACCATTGCCAAACGTAGAATCTGACATTTTATCTAAGATTATGGAATGGTCAAATTATCACAAAAATGATGATGAAAACGATGAGACATCTTTAGAAGAGAGCAAGTGGGATGTAACATTTTTTGACATAAAGAGAAAAGCGGCAAGAAATCTTAAGAAACAATTTCAATACGAAAACACACAAAGATCACCAATCAACATGCCCAATTTTAAAATAAAAACAAAAGACGAAAAAATTGTTGAAGTTGATACAGAAATAGCCAAAAAGTGGGGCATAATAAAGAATATGTTGGAAGACCTCGGCATGGAAGAGGATAAGAACTCTGTAATACCATTGCCAAACGTAGAATCTGACATTTTATCTAAGATTATGGAATGGTCAAATTATCACAAAAATGATGATGAAAACGATGAGACATCTTTAGAAGAGAGCAAGTGGGATGTAACATTTTTTGACATAAAGAGAAAAACGGCAAGAAATCTTAAGAAACAATTTCAATACGAAAACACACAAAGATCACCAATCAACATGCCCAATTTTAAAATAAAAACAAAAGACGAAAAAATTGTTGAAGTTGATACAGAAATAGCCAAAAAGTGGGGCATAATAAAGAATATGTTGGAAGACCTCGGCATGGAAGAGGATAAGAACTCTGTAATACCATTGCCAAACGTAGAATCTGACATTTTATCTAAGATTATGGAATGGTCAAATTATCACAAAAATGATGATGAAAACGATGAGACATCTTTAGAAGAGAGCAAGTGGGATGTAACATTTTTTGACATAAAGAGAAAAACGGCAAGAAATCTTAAGAAACAATTTCAATACGAAAACACACAAAGATCACCAATCAACATGCCCAATTTTAAAATAAAAACAAAAGACGAAAAAATTGTTGAAGTTGATACAGAAATAGCCAAAAAGTGGGGCATAATAAAGAATATGTTGGAAGACCTCGGCATGGAAGAGGATAAGAACTCTGTAATACCATTGCCAAACGTAGAATCTGACATTTTATCTAAGATTATGGAATGGTCAAATTATCACAAAAATGATGATGAAAACGATGAGACATCTTTAGAAGAGAGCAAGTGGGATGTAACATTTTTTGACATAAAGAGAAAAGCGGCAAGAAATCTTAAGAAACAATTTCAATACGAAAACACACAAAGATCACCAATCAACATGCCCAATTTTAAAATAAAAACAAAAGACGAAAAAATTGTTGAAGTTGATACAGAAATAGCCAAAAAGTGGGGCATAATAAAGAATATGTTGGAAGACCTCGGCATGGAAGAGGATAAGAACTCTGTAATACCATTGCCAAACGTAGAATCTGACATTTTATCTAAGATTATGGAATGGTCAAATTATCACAAAAATGATGATGAAAACGATGAGACATCTTTAGAAGAGAGCAAGTGGGATGTAACATTTTTTGACATAAAGAGAAAAACGGCAAGAAATCTTAAGAAACGTTCGAAAAACGTTTAG
Protein Sequence: MPNFKIKTKDEKIVEVDTEIAKKWGIIKNMLEDLGMEEDKNSVIPLPNVESDILSKIMEWSNYHKNDDENDETSLEESKWDVTFFDIKRKTARNLKKQFQYENTQRSPINMPNFKIKTKDEKIVEVDTEIAKKWGIIKNMLEDLGMEEDKNSVIPLPNVESDILSKIMEWSNYHKNDDENDETSLEESKWDVTFFDIKRKTARNLKKQFQYENTQRSPINMPNFKIKTKDEKIVEVDTEIAKKWGIIKNMLEDLGMEEDKNSVIPLPNVESDILSKIMEWSNYHKNDDENDETSLEESKWDVTFFDIKRKAARNLKKQFQYENTQRSPINMPNFKIKTKDEKIVEVDTEIAKKWGIIKNMLEDLGMEEDKNSVIPLPNVESDILSKIMEWSNYHKNDDENDETSLEESKWDVTFFDIKRKTARNLKKQFQYENTQRSPINMPNFKIKTKDEKIVEVDTEIAKKWGIIKNMLEDLGMEEDKNSVIPLPNVESDILSKIMEWSNYHKNDDENDETSLEESKWDVTFFDIKRKTARNLKKQFQYENTQRSPINMPNFKIKTKDEKIVEVDTEIAKKWGIIKNMLEDLGMEEDKNSVIPLPNVESDILSKIMEWSNYHKNDDENDETSLEESKWDVTFFDIKRKAARNLKKQFQYENTQRSPINMPNFKIKTKDEKIVEVDTEIAKKWGIIKNMLEDLGMEEDKNSVIPLPNVESDILSKIMEWSNYHKNDDENDETSLEESKWDVTFFDIKRKTARNLKKQFQYENTQRSPINMPNFKIKTKDEKIVEVDTEIAKKWGIIKNMLEDLGMEEDKNSVIPLPNVESDILSKIMEWSNYHKNDDENDETSLEESKWDVTFFDIKRKAARNLKKQFQYENTQRSPINMPNFKIKTKDEKIVEVDTEIAKKWGIIKNMLEDLGMEEDKNSVIPLPNVESDILSKIMEWSNYHKNDDENDETSLEESKWDVTFFDIKRKTARNLKKQFQYENTQRSPINMPNFKIKTKDEKIVEVDTEIAKKWGIIKNMLEDLGMEEDKNSVIPLPNVESDILSKIMEWSNYHKNDDENDETSLEESKWDVTFFDIKRKTARNLKKQFQYENTQRSPINMPNFKIKTKDEKIVEVDTEIAKKWGIIKNMLEDLGMEEDKNSVIPLPNVESDILSKIMEWSNYHKNDDENDETSLEESKWDVTFFDIKRKAARNLKKQFQYENTQRSPINMPNFKIKTKDEKIVEVDTEIAKKWGIIKNMLEDLGMEEDKNSVIPLPNVESDILSKIMEWSNYHKNDDENDETSLEESKWDVTFFDIKRKTARNLKKRSKNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -