Tsol009175.3
Basic Information
- Insect
- Thelaira solivaga
- Gene Symbol
- bab1
- Assembly
- GCA_947397855.1
- Location
- OX377613.1:60510288-60512097[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4e-17 2.4e-14 53.0 0.0 1 43 55 98 55 100 0.95 2 3 6.7 1.2e+04 -3.6 2.9 4 19 195 213 192 219 0.65 3 3 9.1 1.6e+04 -4.1 0.1 17 23 457 463 456 464 0.84
Sequence Information
- Coding Sequence
- ATGTTGGAAAATTCACATGCATGGATGGGAGCATCTGGTTCATCGATAGCAGCAGACAGTTATCAGTATCAATTGCAGTCCATGTGGCAAAAGTGTTGGAATACCAATCAAAGTTTAATGCATCATTTGCGATTTCGTGAACGTGGCCCCTTGAAATCATGGCGACCAGAGACAATGGCTGAAGCCATTTTTAGTGTGTTAAAAGAGGGTTTATCATTGTCGCAGGCCGCCCGCAAGTATGACATTCCATATCCCACATTTGTGCTTTACGCTAATCGAGTACACAATATGCTGGGACCCTCAATTGATGGCGGACCAGATTTAAGGCCAAAAGGTCGAGGTCGACCGCAACGCATACTGTTGGGTATTTGGCCAGATGAGCATATTAAGGGTGTTATAAAAACTGTTGTCTTCCGCGATGCCAAAGATCTAAAGGACGAAGGACTGGGACCCATGCCATATGGACGGCATTCGCCTGTTTTTCCATTTCAGGAAGGACCACTCAGTTATCCTGGTGTGGCTGGTCCATGTCCAAATGGTATGCCTAGTGCTGGTGGTGCCGGCGACCAAATGTCCCAGGAGGCCACAGCTGCAGCAGTAGCAGCAGTTGCTCATAATATACGACAGCAAATGCAAATGGCGGCAGCAGCCCAACAGCAGCAGCAACTAGGCGAGAGCCATGCTGGTCCAAATATCTTTAATCTTCCGCCGCATTTGGCTGCCGGTGGGCCCATGACTGGTCCTCCTGGTGCGGGCGGCGTGCCTCTACCTAAAGCGAGTATTTCTCCAGCTTTAAGCTCTTCATCGAGTACGGCTGGCATTAGTGCTATGATGGGGCCAAGACATGTTCCTTCACCGTGCGGACCCACTTTGCCCGGTATACCCCAAATTCCTCCCGGCATGGCTGTAGCTTTACATATGGGTGGTAGCGGTCCTGGAGGTCGCTGTGATCCCAGTGCCATTTTAAGTCAACAACAGCAACATCAGCTGCAACACTTGCATTTGCAACAACAACATGCCCTGCATCAACAGCAACAAAAGCATCAACAACAGCAGCACCAGCATCAAATGGCTTTTGGCCCGCATACCTCTACATTGAGTCATACGGCATCATCGTCTTCGGTTATTGGGCTTCCTTCCAATGCGATTGTACATCAAACTCTACAAAAAGCTTCCACACTTGCTTCAAACAAACCAACCTCGTCCACAGCATCGCCTTGTAGGCGCCACAGCCCACACAGTTTAACACCTCTGCATTCGCCATTAACTGAATTGGGTTTAGAAATGAGCTTCAAGCCTTCCCGCCCATTTTCACCCTCCCGTTTATTTTCTGATGACATATCTGACATTGTGAGTGTTGCTGCCTCACTGTCAACATCGCATGCCTCAACGACGACAACAGTCACTACAGCAACAATAGCAGCAACCAGCAGTATTAATACAGACACACTCCACTCCACTACCATTACACCACTTACAACAGCTGAAGCCACAGCAGCAGCGACACCGACAACAACAGTGGCAACAATAGAAGCCACAGCAACGGGAGCGATTAATATTTCAGGATCCACCATAAGCAGCAACATAAGTTCCACGGGGATAAAACTCGAACCAATTACAACAAGTAGCGATTAA
- Protein Sequence
- MLENSHAWMGASGSSIAADSYQYQLQSMWQKCWNTNQSLMHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDAKDLKDEGLGPMPYGRHSPVFPFQEGPLSYPGVAGPCPNGMPSAGGAGDQMSQEATAAAVAAVAHNIRQQMQMAAAAQQQQQLGESHAGPNIFNLPPHLAAGGPMTGPPGAGGVPLPKASISPALSSSSSTAGISAMMGPRHVPSPCGPTLPGIPQIPPGMAVALHMGGSGPGGRCDPSAILSQQQQHQLQHLHLQQQHALHQQQQKHQQQQHQHQMAFGPHTSTLSHTASSSSVIGLPSNAIVHQTLQKASTLASNKPTSSTASPCRRHSPHSLTPLHSPLTELGLEMSFKPSRPFSPSRLFSDDISDIVSVAASLSTSHASTTTTVTTATIAATSSINTDTLHSTTITPLTTAEATAAATPTTTVATIEATATGAINISGSTISSNISSTGIKLEPITTSSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00921367;
- 90% Identity
- -
- 80% Identity
- -