Tatr016984.1
Basic Information
- Insect
- Thecophora atra
- Gene Symbol
- lov
- Assembly
- GCA_937641085.1
- Location
- CALMRH010000044.1:2977349-2991078[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-18 9.3e-15 54.9 0.0 1 44 796 839 796 840 0.96
Sequence Information
- Coding Sequence
- ATGTTAAAGGACTGTGAGGCAGGGCTTAAGAGACGTAAGCTGTCGCTGCCGACGACGACACTATCAACTCCATCGCCCCTGAATATGATGATGATGATGACAACCTCGACTGCTGCAACGGTTACGGGGACAGTATCAAAACCGGGCGCCATGACTGCGCTGACACATGACCTGACGCAGGCGCCCCTCTCTACCCTGGCGGCCACGCCGATGATGCACGCCAACAACCCAACAGCTTCGGCCGCGCCCTCGACCCCTGTAAATACCGCTACAACCGCCGCACCCGCTGTACAGGATcactacagcctgcgctggaacaaccatcagaatcacatcctccgcgccttcgatgccctgctgcagacgaaaacgctggtggacgtgacgctcgtttgcgccgagaccagtatccgggcccacaagatggtgctgtccgcctgttcacccttcttccagcgcgtctttgcggagactccgtgcaaacatccggtgatcgtgctgaaggactttcgcggttgggttgttcaggcgatagttgatttcatgtaccgcggcgagatcagtgtagctcaggaacgattgcagaccctgatccaggccggcgaatcactgcaggtgcgcggtttggtagagagttcggtgccggagcacacgccaacgccagccgcatcccccgacgacttcgcCATGATCGATCCCTCGTTGATGTCATCGGACCTGGGGCGATGTTCGAGCCTCGACGACGAGTCACCTTCGATGGTGACCGCGAGCTCAAAAGTTATTCTGCCCTCGCGACTTTTCAGCGCGTCGACGCGACGTGAGCGAGATCGTAAACGTGCTCGAGAGCGGGATCAGGACCGTGAAACCGAGCAGATGTCTGACAGTGAGTTCCACAACGAATCAAACGTACAAACCGACTTGAGCACTTCGCCATTACCACGGCGTAAGCAGGCGCGGCCCCGACGACTTTCCGGTGAGCTTCCACATGAGATGACCAGCCAATCGTCGAGCCCAGCACAGATTGAGCCGCCGGTGCAGCGTGAAGAAAAGAAAGTTGTTCAAAAAGAAGTGCCGAGTTCGCAGGAGGTCTTGGCGACAGTGATAAAGCGGGAACTAATGGATCCCATGGATGAGGATCAAAACGGAACCTGCGAAGACCAGAACGAAAGCGGACAGCTTTTTCCTGACAGTGAAAATGCAACCAACACTCAGGCACCTAATTTGGGGCTGTCACTTCTGAGCGGACTCCCGCAGCGGGATCACAATGATCACGAGGAGGGGGAAGAGCACCAAGATTACGACGACGAGGAACACGATAACGAAACCGAGGACATCGAAGAGCTTATTAACGGTTCTAATGAGCGGAGACGAAAGTCAACTTCAGGTCTGTCCGATGGACCTGAAGATCTTTGCACCACGAAAAAGGATACGTCCCACTCAGGAACTCATTCTTCCTCTGAGCCCGAAATCAGTCCATCGAAAAACCATAACAACAACAACAATAACAGCAAAGTGAGCAACAACAACAACAACCGGCTTGTTCTCTCCCTCAAAGACATCCGGCAACTGAACAAACCTCAATCGGGCGGTACGTCTTCGGGTCGTCACTCTTCAACGCCCAACTCGACCAGCGGCCTCCATCCTTTTGCGGCGGCTTCCCTACGCGACTTACGGCTCGATCGTGGCGGCTCGAACTGCAGCAATGCCGACAATCAATGCAAAATGGAAGCGTTGGAGGCACAGATGCATGCCGCCGCCGCTGCCGCTGCTGCAGCCGCCGCAGCCAATGGAGAAAATCCTTTCCAACACATGGAACATCAAATGGACCTGTCGTTTGCTGCTGCCGCCGCCGCCGCTGCCGTTTCGCATCAGCAAAATCGTGAACGTGATCAGCAACTGCAACGCGAACAACGTGAACTGCAGCAACATCACAATGCATACGCGAACAGCTTGCTCGGACAGATGGGGATGCCGGGTATGCCAGGCTTTGGGCCCGGACCGGGCGGCCCATCCGGTGGGCCAACGTCGGCGCACGAACGACTCGAGGAGAGCATGAATCGCTTGAGCAAGGAATTCACGCCGACGTCGCCGATGAGTCTGCCGAGCCACTTCAATCCACCTGAAGGACCACCACATCCGCCGTCACCACTGCCGTTTCCTGGCATGTCATCGGCGTTGGCATTAACGCCGCCACACATGTTCGGTCTTGATTCACCTCTCGGCCTCTTTCCGCCCGGCATCGATCCAGGAAAGCTGTACAACCCACTGATGGAAATGTCCGATCCACGGGGAATGACCGGCGAACCACAGCCGTATCTGAAAAAGAAAATGCCTCGTCCTAAAGGTCAACACTCGGCGCCGCGCGGTGGTCCTCCGCGTTCGTGGACCAACGCCGAACTCACCGAGGCGCTTCAGCACGTCTGGAACAAGAAGATGACCACCTCGCAGGCCTCTCGCATCTTCGGCATCCCCTACAACTCGCTGCTGATGTACGTCCGCGGCAAATACGGGAAAAGCTTGAAGCTGGAGCAGCTGCGGAAGGACTGCATCAGCGGCCCGCCCCTCGAACTGCTGCAAATGGGTCTCAGCGGCAGCACGAGCAGCAGTAAGAGCAACAAAAACAGCTCTGGTTCGAGTGGCAATAATAACAGCTCCAACAACAACAACAACAGCAACAACAACGGAGCTTCAGCGGGCGATGAGAATCGTGATCGAAGCGATGGACCACGAAAGGAGCAGCACCAGCAGCAGCAGCAACCACAGCTGCCACAACTCGGAAACGGTGCTGATCTGTCGGAGCTCGTCGCACCCGGCTGCCTCGGTGTCGGCCCGCTAGGAGGCCCCGGAAGCGCCAACTCAGAGCCCGACCTCCTCGGAGGTCCCAATGCGCTGTTCAACCCCTTCCCGCCCGGCTTCTACCACGACTTCCCCGGGGGATTCCCCGGCCTGCCGCTCAGCATGCTGAACCTGCTTCCGCCCACGGAACGACATCAACACGCCGCAGCCGCCGCCGCAGCCATGCACCACATGACGCTCGACGAGGACTGCAAATCGGACCGATCGAAGCAGAGTTCGTCCATGGATGAGGACGGCTTCGGCAGCTTGTCGCTGTCACAGCAGCCGCTGGCGCTGGGTCGCGACTTGACGATGGGCGGCGGTGGCGGGGCGGGCGTCGGATTGGTGCAGCAGAACGGCGCGGCGCAGGAGTGA
- Protein Sequence
- MLKDCEAGLKRRKLSLPTTTLSTPSPLNMMMMMTTSTAATVTGTVSKPGAMTALTHDLTQAPLSTLAATPMMHANNPTASAAPSTPVNTATTAAPAVQDHYSLRWNNHQNHILRAFDALLQTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVAQERLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDFAMIDPSLMSSDLGRCSSLDDESPSMVTASSKVILPSRLFSASTRRERDRKRARERDQDRETEQMSDSEFHNESNVQTDLSTSPLPRRKQARPRRLSGELPHEMTSQSSSPAQIEPPVQREEKKVVQKEVPSSQEVLATVIKRELMDPMDEDQNGTCEDQNESGQLFPDSENATNTQAPNLGLSLLSGLPQRDHNDHEEGEEHQDYDDEEHDNETEDIEELINGSNERRRKSTSGLSDGPEDLCTTKKDTSHSGTHSSSEPEISPSKNHNNNNNNSKVSNNNNNRLVLSLKDIRQLNKPQSGGTSSGRHSSTPNSTSGLHPFAAASLRDLRLDRGGSNCSNADNQCKMEALEAQMHAAAAAAAAAAAANGENPFQHMEHQMDLSFAAAAAAAAVSHQQNRERDQQLQREQRELQQHHNAYANSLLGQMGMPGMPGFGPGPGGPSGGPTSAHERLEESMNRLSKEFTPTSPMSLPSHFNPPEGPPHPPSPLPFPGMSSALALTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRGMTGEPQPYLKKKMPRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPLELLQMGLSGSTSSSKSNKNSSGSSGNNNSSNNNNNSNNNGASAGDENRDRSDGPRKEQHQQQQQPQLPQLGNGADLSELVAPGCLGVGPLGGPGSANSEPDLLGGPNALFNPFPPGFYHDFPGGFPGLPLSMLNLLPPTERHQHAAAAAAAMHHMTLDEDCKSDRSKQSSSMDEDGFGSLSLSQQPLALGRDLTMGGGGGAGVGLVQQNGAAQE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01426853; iTF_01022934; iTF_01023156;
- 90% Identity
- iTF_01426853;
- 80% Identity
- iTF_01426853;