Basic Information

Gene Symbol
lov
Assembly
GCA_943737955.2
Location
OX031315.1:59570314-59584623[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.7e-18 1.2e-14 54.8 0.0 1 44 812 855 812 856 0.96

Sequence Information

Coding Sequence
ATGCTTAAGGACTGCGAGCCGGGGCTGAAGAGACGTAAGTTGTCGCTGCCGACGACGACACCACCCACAACACCACCCACTCCGCCGCCTCTGaacatgatgatgatgatgacaacgCCGAGCCCAACGAAGGTTACAGGAAAGACATCGAAAACGGGCGCCATGACTGCTCTAACGCACGATCTGACGCAGTCTCCGCTCTCTACCATGGCGGCCACACCTATAATGCATGCCAACAATCCGACCGCTTCAGCCGCGCCCTCGACTCCCACAAATACTGCcactgccgctgccgctgtaGTTGCAGCAGCTGCCGCCGCAGCCGCTGTGCAGGATCACTACAGTCTGCGCTGGAACAATCATCAGAACCACATCCTGCGCGCCTTCGACGCCCTGCTGCAGACCAAAGCGCTGGTCGATGTGACGCTCGTCTGCGCCGAGACCAGTATACGGGCGCACAAGATGGTGCTTTCCGCCTGCTCGCCCTTCTTTCAGCGAGTCTTCGCCGAAACTCCCTGCAAGCATCCGGTGATCGTGCTGAAGGATTTCCGCGGTTGGGTGGTTCAGGCAATCGTTGATTTCATGTACCGCGGCGAGATCAGCGTACCGCAGGAACGCTTGCAGACCCTGATACAAGCTGGCGAATCGCTGCAGGTGCGCGGCTTGGTCGAGAGCTCGGTGCCGGAGCACACGCCGACGCCGGCCGCATCGCCCGATGATTTCGCCATGATCGACACTTCGCTGATGTCATCGGGTCTGGAGCGCTGCTCGAGCTTCGATGAGGAGTCGCCGTCGATGGTGACTGCGGGCTCAAAAGTTATTCTGCCGTCGCGACTTTTCGGCGCGTCTACACGACGCGAGCGAGAACGCAAGCGCGAACGCGGACTAGAACGTGAGCAAGAACGTGATACAGAGCTGATGTCCGATAACGAATTGCACAACGATCTGAACGGACATCCCGACTTATGTACGTCTCCGATGCCGCGTCGTAAGCAGGCGCGTCCGCGACGACGGTCCGGAGAGCTGCCCCATGAGATGACCAGCAAAGCAGCGAGTCCAGCGCCGGTTGAAGCGGAAGCAGTAGGAGagaaaactgttcaaaaagAAGTGCCGGATATGCAGGAAACCATGGCGACTGTGATCAAGCGCGAGCTAATGGATCCCAAGGATGAGGATCATCTGAACGGCAGCGGCGAAAACCAAAATGAAAGCGGACAGCTTTATCCTGAGCTTGAAGACGCAGCCACTTTACAGAACGTAGCGCAACTGCAACAGCCTACTTTGCCGTTGCCCATCCTCAGTGCACTTCAGGAGCGCGATCAGCAGGATCATGAGGAGGAGGGGAACGAAGAGTACGACGAAGATGACCGCGATAACGAACCCGAAGACATTGAAGAGCTTATTAATACCTCCAACGAGCGGCGGCGCAAGTCCACTTCGGGACTGTCCGAAGGCCCTGAGGATCTGTGTACCACGAAGAAGGACGTCGACCACTCGGCCAGTCATTCTGCCTCGGAGCACGAGGGTAGTCCctcgaaaaacaacaacaataatagcaaactgaacaacaacaacaccaatcGCCTTGTTCTCTCGCTCAAGGACATCCGGCAACTGAACAAACCGCCCGCCGGCTGTTCGTCTTCCGGTCGTCACTCGTCAACACCCAATTCGGTCAGCGGCATGCATCCTTTTGCCGCCGCTTCTCTTCGCGATCTGCGGCTCGATCGTGGCGGTTCCAACTGCAGCAACGCGGAGAATCAGTGTAAAATGGAAGCGTTGGAGGCACAAATGcatgccgctgctgctgccgctgctgcagCCGCCGCGGCCAATGGAGAGAACCCTTTCCAGCACATGGAACACCAAATGGATCTTTCGTTTGCTgctgccgccgccgccgctgcCGTGTCCCATCAGCAGAATCGCGAACGTGATCAACAAATGCAACGCGAACAACGCGAATTGCAGCAGCACCATAACGCGTACGCGAACAGCTTGCTCGGACAGATGGGGATGCCGGGTATGCCGTCGTTTGGCCCAGGATCGGGCGGCCCATCTGGCGGGCCACCGTCGGCGCACGAACGGCTCGAGGAGAGCATGAACCGCTTGAGCAAAGAGTTCACCCCCAGCTCGCCGATGAGTCTGCCGAGTCACTTCAATCCACCCGATGGACCACCACATCCGCCGTCACCGCTGCCATTTCCGGGCATGTCATCGGCGCTGGCGTTGACGCCGCCACACATGTTCGGTCTCGATTCACCGCTCGGACTCTTTCCGCCCGGCCTCGATCCCGGCAAATTGTACAACCCACTCATGGAAATGTCCGATCCACGCGGAATGGGCGGCGAACCACAACCGTATCTGAAAAAGAAAATGCCCCGCCCCAAAGGCCAGCACTCCGCGCCTCGCGGGGGCCCCCCACGCTCCTGGACCAACGCCGAACTCACCGAAGCGCTGCAGCACGTCTGGAACAAGAAGATGACCACCTCGCAAGCGTCGCGCATCTTCGGCATTCCGTACAACTCGCTGCTGATGTACGTCCGGGGCAAGTATGGCAAAAGCTTGAAGCTCGAGCAGCTGCGGAAGGACTGCATTAGCGGGCCGCCCCTGGAGCTGCTCCAGATGGGGCTCAGTTCCACTGCAGGCagcagtaaaaacaacaagaacagctcTGGCGTTGGCGGTGCCGCCTCcagtggcaacaacaacaacaataacaacaacaacagcgcgACTTCAGCCGGCGATGAGAGTCGCGACGATGTACGAAAGGAccaccagcagcaacagcaacaacaacaacaacaacaccagcaacaacaacagctgtcGCAACTCGGAAGCGGTCCGGATCTCTCGGAACTCGGAGTAGCTGCTTGTCTCGGTGCTGTGCCGCTGGGAGGCCCGGGAAGCGCCAACTCTGAGCCCGACCTGCTCGGCGGCCCCAACTCGCTGTTCAACCCCTTCCCGCCGGGCTTTTATCCCGACTTCGCAGGCGGCTTTCCCGGTCTACCGCTCAGCATGCTGAACCTGCTGCCGCCCACGGAACGGCATCAACACGCGGCCGCAGCTGCGGCAGCCATGCATCATCACATGACACTCGACGAGGACTGCAAATCGGACCGCTCCAAGCAGTCCTCCTCCATGGACGAGGATGGCTTCGGTGGCCTGTCGGTGACGGTAGCATCGCAGCAGCCGCTGGCGCTGGGCCGCGACTTGACGGTGGGCGGCGGCAGCGGCGTCGGGGTCGGCTGCGGCCTGGGATTGGTGCAGCAGAATGGCGGGACGCAGGAGTGA
Protein Sequence
MLKDCEPGLKRRKLSLPTTTPPTTPPTPPPLNMMMMMTTPSPTKVTGKTSKTGAMTALTHDLTQSPLSTMAATPIMHANNPTASAAPSTPTNTATAAAAVVAAAAAAAAVQDHYSLRWNNHQNHILRAFDALLQTKALVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQERLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDFAMIDTSLMSSGLERCSSFDEESPSMVTAGSKVILPSRLFGASTRRERERKRERGLEREQERDTELMSDNELHNDLNGHPDLCTSPMPRRKQARPRRRSGELPHEMTSKAASPAPVEAEAVGEKTVQKEVPDMQETMATVIKRELMDPKDEDHLNGSGENQNESGQLYPELEDAATLQNVAQLQQPTLPLPILSALQERDQQDHEEEGNEEYDEDDRDNEPEDIEELINTSNERRRKSTSGLSEGPEDLCTTKKDVDHSASHSASEHEGSPSKNNNNNSKLNNNNTNRLVLSLKDIRQLNKPPAGCSSSGRHSSTPNSVSGMHPFAAASLRDLRLDRGGSNCSNAENQCKMEALEAQMHAAAAAAAAAAAANGENPFQHMEHQMDLSFAAAAAAAAVSHQQNRERDQQMQREQRELQQHHNAYANSLLGQMGMPGMPSFGPGSGGPSGGPPSAHERLEESMNRLSKEFTPSSPMSLPSHFNPPDGPPHPPSPLPFPGMSSALALTPPHMFGLDSPLGLFPPGLDPGKLYNPLMEMSDPRGMGGEPQPYLKKKMPRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPLELLQMGLSSTAGSSKNNKNSSGVGGAASSGNNNNNNNNNSATSAGDESRDDVRKDHQQQQQQQQQQHQQQQQLSQLGSGPDLSELGVAACLGAVPLGGPGSANSEPDLLGGPNSLFNPFPPGFYPDFAGGFPGLPLSMLNLLPPTERHQHAAAAAAAMHHHMTLDEDCKSDRSKQSSSMDEDGFGGLSVTVASQQPLALGRDLTVGGGSGVGVGCGLGLVQQNGGTQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01426582;
90% Identity
iTF_01023156;
80% Identity
iTF_01023156;