Tpit012329.1
Basic Information
- Insect
- Thaumetopoea pityocampa
- Gene Symbol
- Mblk-1
- Assembly
- GCA_017165845.1
- Location
- WUAW01012747.1:17877-23286[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-11 1.7e-08 34.7 0.0 1 39 29 68 29 71 0.91 2 2 6.2e-19 8.7e-16 58.1 0.0 1 43 235 278 235 280 0.95
Sequence Information
- Coding Sequence
- ATGTATATGGGTAGCAGTGATTATTTACCATTGAAGCGTACTGCCTTTGAGACATCGAGCAATGTGGTGCCGCGTCGCGCGTACACCGACGACGAGCTGCAGTCGGCCCTGCGCGACATCCACGCGGGGCGACTCGGCACCCGGCGAGCGGCGCTGCTGTACGGCATCCCCCGTTCTACCCTCCGGAACAAGCTCACCAAAACAGGCCCAGTCGACCGCCCTGAGTCAGAACCTGACAGCGACACTGAACGCCCTGAATCCCCTCCATCAGTCATACTTAAAATACCCACCTTTCCACCCCCAGACGATAAGAGCCCGTCTCCTGCTACACCTATTACACCATTCACACCGATCATGCCAACACCACAACCCCAGCTGAACCCGGCATCGCAATTGCTTCTCTCACCATCAGTCTTCGCAGATCCACCATCCAACCAGCACTTATACACTTCAATAAGTGATGTCATAGCGAAGAGTATAAGTCAGAAATTTCAGCAACCACTGGACAGGCCTCATCACCAACCGCCTGATCATCCATTCATGAGAGCGCCCGAGAGACACGTCTCGGTGATTAAAACTCCTCCAGAGTGTCAGAGGAATTATTCCGTACCTGGTAATTCCAAAGCCACGACGAATAATAACGGTCAGCCAGCAGCCGGCGGTAAAGGAACACGACCGAAACGTGGAAAGTACAGGAATTATGATCGCGACAGCCTGGTGGAGGCGGTGAAGGCGGTGCAGCGGGGGGAGATGTCAGTGCACCGCGCCGGCTCCTACTACGGTGTCCCTCATTCCACTCTGGAGTACAAGGTCAAGGAACGGCATTTGATGCGGCCCAGGAAACGTGAGCCCAAGCCACCGCAAGACGTGAAGCCGCCACCGCCGAAGCCGCCACAGCCTAAGCCTCCCACAAAGCCTTTCTCAAACGGAATGAACGGCCCCGAGACGTCTGGATACCCAGGGTATCCGTTTTGGGCGGGAGGTGGTTTCGCGCCTCCTCATGGGCCTGATCTGTTTGCGTCGCAGATGATGCGGCGGCTGCGAGAAGAGGCTCCCCCGCCATCCAACGGGTCATTCCTAGAAGGGATTATACGGTCCAGTTTGGAGCGGCCGGGAGCAACGCTATTGCAGCGGTTGACGGCGGAGCCCCGTCCCACGACTGAGGCGCCAGGCCTTCTGCGAAGGCTCACCGGAGACGTTGACGAGCCACCGATGCGACGGCCTCGCCTGGACAGTTCGGACCAGGCTCTGGCTGCGGAGATGCGCGAGGCTGTGCAGCGGCTTAGGGCTGATAAGCTGCGGCCGCGCAACGGGACTCCTACGCCTCCCCCTGCGCCCGCGCCGACCCCTCCGCCCGCGCCGCCAGCCGCCCCACCCGACCGCGCCTAG
- Protein Sequence
- MYMGSSDYLPLKRTAFETSSNVVPRRAYTDDELQSALRDIHAGRLGTRRAALLYGIPRSTLRNKLTKTGPVDRPESEPDSDTERPESPPSVILKIPTFPPPDDKSPSPATPITPFTPIMPTPQPQLNPASQLLLSPSVFADPPSNQHLYTSISDVIAKSISQKFQQPLDRPHHQPPDHPFMRAPERHVSVIKTPPECQRNYSVPGNSKATTNNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDVKPPPPKPPQPKPPTKPFSNGMNGPETSGYPGYPFWAGGGFAPPHGPDLFASQMMRRLREEAPPPSNGSFLEGIIRSSLERPGATLLQRLTAEPRPTTEAPGLLRRLTGDVDEPPMRRPRLDSSDQALAAEMREAVQRLRADKLRPRNGTPTPPPAPAPTPPPAPPAAPPDRA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01179428;
- 90% Identity
- iTF_01179428;
- 80% Identity
- -