Pgno015559.1
Basic Information
- Insect
- Pheosia gnoma
- Gene Symbol
- Mblk-1
- Assembly
- GCA_905404115.1
- Location
- FR989916.1:5091793-5101197[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.2e-12 1.3e-08 34.5 0.0 1 39 99 138 99 141 0.91 2 2 4.3e-19 6.6e-16 57.8 0.0 1 43 305 348 305 350 0.95
Sequence Information
- Coding Sequence
- ATGTATCGAATCAATATCGTTTCAATATCGGCTCGTCGCTCCTGTCACCTGTTCGACAAGGTTTCTATTGATGGTATCGAGACGGTTAAAATCGTCGTCAGCTTACTATCGGAGGTTGGGGAGAAGGTGCCAGCGCCGTCGTCTCCCAGCCTCGCGGAGCAGCCTCTGGACCTGAGCGCCAAGTCCACCTCCAGCACCAGTGGTACCCCCCCGCCTGATGCCAGACTCTTGGATAACAGATTGAAACGCGCCGGGTTGGACACGGCAAGCAACAGCGTGCCGCGCCGCGCCTACACCGACGATGAGCTGCAGTCGGCGCTGCGCGACATCCACGCGGGACGACTCGGCACGCGCCGCGCCGCCCTCCTCTACGGCATACCCCGCTCCACCCTCCGCAACAAGCTCACCAAAACAGGCCCAGTCGACCGCCCCGAATCAGAACCGGACAGTGATCTTGAACGCCCAGAATCCCCTCCCTCAGTCATCCTCAAAATTCCAACGTTCCCACCTCCAGACGATAAGAGCCCATCTCCTGCCACGCCTATAACACCTATCACTCCACTCATCCCGCCGCCACAGCCTTCGCTGAACCATACATCTCAACTGCTGATGTCACAGTCAGTGTTTGCGGATCAACCGTCAACACAGCACCTGTTCACTTCGCTGAGCGATGTGATAGCGAAAAGTATCAGTCAGAAGTTTCAGCAGCCGCTTGATAGGTCTCACCATCAGCCCCCCGAACACCCGTTCATGAGAGCATCGGACCGACACGTGTCCGTGATCAAAACTCCACCAGACAATCAGAGAAATTACTCGATGCCTGGAAATTCTAAGGCTATGACAAACAACAACGGCCAGCCGGCGGCGACAGGGAAAGGTACCAGGCCCAAACGCGGCAAGTACAGGAACTACGACCGGGACAGCCTCGTGGAAGCTGTCAAAGCGGTCCAGCGGGGCGAGATGTCTGTGCACCGTGCCGGCTCCTACTACGGAGTGCCCCATTCGACCCTCGAATATAAGGTCAAGGAGCGGCATTTGATGAGGCCACGAAAACGCGAGCCGAAGCCGCCTCAGGACATTAAGCCGCCTCCTCCGAAGCCGCCGCCGCCTAAACCACCAATTAAGCCATTTTCGAACGGCATGAACGGCCCCGAGACGTCAGGGTACCCAGCCGGGTATCCGTTCTGGGCGGGAGGCGGCTTCGCGCCGCACGCGCCTGACCTCTACGCGTCGCATATGATGCGGCGGTTGCGCGAGGAAGCTCCGCCGCCAGCCAACGGGTCGTTCCTCGAAGGCATCATCAGGTCGAGTCTGGAGCGGCCGGGAGCAGCGCTGCTGCAGCGGTTGACGGCTGAGCCTCGCCCCACGACCGAAACGCCCGGTCTTTTGAGGCGACTGGCCGGGGACGTTGATGAGCCGCCGGCGCGGCGACCTCGCCTCGACAGCTCAGACCAGGCTCTCGCAGCGGAGATGCGTGAAGCTGTGCAGCGGCTGCGGGCGGACAAGCTGCGCCCGCGCAACGGCACGCCGACGCCGCCGCCCGCGCCGTGCGCGCCCTCCCCGCCGCCCGCGCCCCCCGCAGCGCCCCCCGACCGCGCCTAG
- Protein Sequence
- MYRINIVSISARRSCHLFDKVSIDGIETVKIVVSLLSEVGEKVPAPSSPSLAEQPLDLSAKSTSSTSGTPPPDARLLDNRLKRAGLDTASNSVPRRAYTDDELQSALRDIHAGRLGTRRAALLYGIPRSTLRNKLTKTGPVDRPESEPDSDLERPESPPSVILKIPTFPPPDDKSPSPATPITPITPLIPPPQPSLNHTSQLLMSQSVFADQPSTQHLFTSLSDVIAKSISQKFQQPLDRSHHQPPEHPFMRASDRHVSVIKTPPDNQRNYSMPGNSKAMTNNNGQPAATGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDIKPPPPKPPPPKPPIKPFSNGMNGPETSGYPAGYPFWAGGGFAPHAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLTAEPRPTTETPGLLRRLAGDVDEPPARRPRLDSSDQALAAEMREAVQRLRADKLRPRNGTPTPPPAPCAPSPPPAPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01425862;
- 90% Identity
- iTF_01425862; iTF_00621939;
- 80% Identity
- -