Tpit005287.1
Basic Information
- Insect
- Thaumetopoea pityocampa
- Gene Symbol
- Rel_1
- Assembly
- GCA_017165845.1
- Location
- WUAW01004680.1:34513-41410[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-30 2.8e-26 93.2 0.3 1 119 61 178 61 186 0.92
Sequence Information
- Coding Sequence
- ATGTCAACCTCCAGTGATCACGAGATGTGCGAGGAATCCAACTCTCCTCAGACGTTTATCAAGGAATCTCCACAGAGTTCACCATCGCAACAAGTGCCTCAGCTGACGAATTGCTTGACTGAGCTGACTTGTGCGGATACATATCAAAGCCAAAACATATGCCATTgtATCGGTCCAATTCTTCGAATTATAGAACAGCCACAAAATCATTTCAGATTTCGCTATGTTAGTGAGATGGTTGGCACACATGGGTGTTTACTTGGGAAGTCTAGCACAAGTAAGAATAAAACCCATCCCACTGTTGAGCTGGTCAACTACAATGGTGAAGCGATCATACGTTGCCGTCTGGCACAATACAACGTGGAAGAAGATCACCCACACAAACTTCTCGAAGATGAGCAGGACCGGGACGTGAGCTACCGCGTCCCCGAACAGGGCAGCTACAAAGTTGGGTTCGCTGGTATGGGCATCATTCACACAGCTAAGAAAGACGTCTCAGGAATCCTTTTCAAGAAAATGTCCGAAAAATGCAAGAACTTGATATATAAAGATGTAAGTATTATTCATTATACATTACACTAA
- Protein Sequence
- MSTSSDHEMCEESNSPQTFIKESPQSSPSQQVPQLTNCLTELTCADTYQSQNICHCIGPILRIIEQPQNHFRFRYVSEMVGTHGCLLGKSSTSKNKTHPTVELVNYNGEAIIRCRLAQYNVEEDHPHKLLEDEQDRDVSYRVPEQGSYKVGFAGMGIIHTAKKDVSGILFKKMSEKCKNLIYKDVSIIHYTLH*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -