Basic Information

Insect: Thalpophila matura
Gene Symbol: -
Assembly: GCA_948465475.1
Location: OX419204.1:2514223-2550394[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.58 39 5.3 1.0 2 23 489 510 488 510 0.87

2 18 0.0072 0.49 11.3 0.0 1 23 520 543 520 543 0.95

3 18 0.042 2.9 8.9 2.8 1 21 665 685 665 686 0.94

4 18 0.043 3 8.8 4.2 2 23 729 750 728 750 0.95

5 18 1.9 1.3e+02 3.6 0.4 1 23 762 786 762 786 0.90

6 18 0.00014 0.0098 16.6 0.3 2 23 793 816 792 816 0.97

7 18 0.19 13 6.8 0.3 1 23 822 844 822 844 0.93

8 18 0.0037 0.25 12.2 2.9 1 23 850 872 850 872 0.98

9 18 1.1 75 4.4 0.2 2 19 883 900 883 903 0.89

10 18 0.11 7.8 7.5 0.2 1 23 982 1004 982 1004 0.97

11 18 2.2 1.5e+02 3.4 7.2 1 23 1011 1033 1011 1033 0.95

12 18 0.0015 0.1 13.4 1.8 1 23 1077 1100 1077 1100 0.95

13 18 0.00025 0.017 15.9 0.7 1 23 1107 1130 1107 1130 0.98

14 18 0.017 1.1 10.1 0.2 2 23 1151 1173 1150 1173 0.96

15 18 0.0017 0.12 13.2 1.1 3 23 1199 1220 1198 1220 0.95

16 18 0.00016 0.011 16.5 2.9 1 23 1238 1260 1238 1260 0.98

17 18 0.00013 0.0091 16.7 0.1 1 23 1266 1288 1266 1288 0.97

18 18 0.00042 0.029 15.2 0.7 3 23 1296 1317 1294 1317 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.58	39	5.3	1.0	2	23	489	510	488	510	0.87
2	18	0.0072	0.49	11.3	0.0	1	23	520	543	520	543	0.95
3	18	0.042	2.9	8.9	2.8	1	21	665	685	665	686	0.94
4	18	0.043	3	8.8	4.2	2	23	729	750	728	750	0.95
5	18	1.9	1.3e+02	3.6	0.4	1	23	762	786	762	786	0.90
6	18	0.00014	0.0098	16.6	0.3	2	23	793	816	792	816	0.97
7	18	0.19	13	6.8	0.3	1	23	822	844	822	844	0.93
8	18	0.0037	0.25	12.2	2.9	1	23	850	872	850	872	0.98
9	18	1.1	75	4.4	0.2	2	19	883	900	883	903	0.89
10	18	0.11	7.8	7.5	0.2	1	23	982	1004	982	1004	0.97
11	18	2.2	1.5e+02	3.4	7.2	1	23	1011	1033	1011	1033	0.95
12	18	0.0015	0.1	13.4	1.8	1	23	1077	1100	1077	1100	0.95
13	18	0.00025	0.017	15.9	0.7	1	23	1107	1130	1107	1130	0.98
14	18	0.017	1.1	10.1	0.2	2	23	1151	1173	1150	1173	0.96
15	18	0.0017	0.12	13.2	1.1	3	23	1199	1220	1198	1220	0.95
16	18	0.00016	0.011	16.5	2.9	1	23	1238	1260	1238	1260	0.98
17	18	0.00013	0.0091	16.7	0.1	1	23	1266	1288	1266	1288	0.97
18	18	0.00042	0.029	15.2	0.7	3	23	1296	1317	1294	1317	0.95

Sequence Information

Coding Sequence: ATGTCAGAGGCGCAGCCCCCATTAATCCTCTGCATGGAGAACGCAACCGGTGAAGATGTGGCGCTCCAGATAGAACCGGATGATGACTTCCAGATGTTTCTTGATAAGGCCAGATCACTTCTTGGCTTCGATGTTGACCTAAACTCTATAACCAGAAACCAGCCCGTCTCTCTATCAGAAAACGTATACCAGTTCCTAATAAACGCCGAACAAAACTTACAAGCAGACGAGCTCACGCAAAACTTTGACCAAATGTTGGACACCAACGATGAGGCCAACGATTTAATCTACATATTGGACGACGGCACCCAAATTAGAGCTTCACAAATTCACTTTGACAATGATGATCCTTTAATTGATTTGACAGCTGAGAAAATACCCTTTCTCAAGTACGCTGACGTGGCCGATGATGTTGATTTAGATAATATTGATATTCAAGAAACTAAGAAAATTAATATTGTTGGGAGCCCTGTCTCAGGCAAAAATTCTAGTCCAAAATGCAGTTTCGTCAACTCCCTGCCGTTCAAACTTGTATGCAACAATACCTCAGGTTTTGAAGCGCAATTCACGAAATATCTAGAAGCTAATACAGCCAAAACATACGCAACATTAAAACCTGTCACCGCCCGGAACAAATCACCAAAAAGTTTGATAAAAGATAACTTTAAGAACTACGACGATAATTATCAGAGGAGCGACAATTTATCGTACACCAGGGAGGAGATTTTGAACATGTTCAAAGACTCCCCGATGACGTCACTACCGTATGACCAGGGTTACAGCGAAAGGAGACATGTTAGGAAGACCGACCCGTCAAGACTTGTTCATAAGAATTGGAGCAAGCCAATATCTAATGTGGATATTGAAGTTTTAATAGGAGATAACGAGAGTCAAATATGTTTTGTTTGCGGAAAACATGTGGACAATAGTGTGGATAAATTGTACCTTTTTGATAATGAAGATCAAAGACTACTACATAGGTGTTTGCCACAAAAGAAAATGTCAACTCAATTGAAAATTATTTGCGAGGGCTGTCTTAATGAAAACTTTAGACCATGCAGAATGAAAAGTGCCAACCACTTTTTGAATCCAGACGAATTCCTTGTCATACGCAACAATCAACAATACATATTCCAAAAAGTTAAAAACTTCAGTTTCACGCATTTGGATAAAGCCAATGAGATCATAAACAAGGTAGAGTCAAACATAGACAAGGAAGAGTTTGTAAAAGTCGAAATTGGGTCCGACGGTGAAATTATCACGAAGCCCATAGATAACGACCCGAGGTCTGATGACATCATTATCGTAAAGGATGAGCAAAAGGAGGGTAGTTCGAGTGATGTAGAGATTATAGAGCCGGAACCGGAGATAGATAATATCATAGACAATTTGGAAGAAGCTGATGAGGAAGTGAAAGAATTTTTGGGGAAATATCAATGTGATAACAGTGAAGTTAAAGAATTAAAATGCAGATTCTGCGATAAAATATTCGTGGACCTACCGGAAGTGACGGAGCACTGTGACACGCATAAACATGTGTTAGAAGACGGTGAAGTGTTCCCGTGTCCACTTTGTAATTATGGTTATGCAAATTTGAAGTGGCTGAAAGGTCACTTGAAGGCAGCCCACGAGAAAACTGAAACAACAATAGCATTAAAAGAAGAAAATGAACCAGTGAAAGAGGAGAATAAAGATGATGAACAAACACCGCCTAAGGCGTGCTCACCTATTGCGACCAGAACAAGAAGTTGTAGTAAAAAGGGAGACAGCGATAAAAAAGAGAAGGAAAAGCCAGAAGATAGTAAGACTAACTCTAATACTGAGACGACGGAGCCACCCATCCTAAAAACGGAGGTAAAGCAAGAATGCCTGGACAGCAGTGAGGATGAGATCTGGATCGTCCAGACTGCTGACGCAGAGGCCTCGCAGGAGCTGCAGAAACTCCTGTGTAAGGTTAAAGTTGACGGTCAGGATGGTGATTCTGAGAAAACACACAAATGTTTTAATTGCAGTCAAACATTTGCGAGCGCGGATGGTCTTTCAAACCATCGCTGTCGAAAACGCGGTCGGAAGCGGAAGTCCAAAGATGAGGTCAACCTTATATGTATACCTACTGAGGAAGACTTCTTGAAGCGTCCTCGAAAACGCCGCAGCCGGGAACCGACCTCGAACCCTCAAGTGCTTACTTGTCACAACTGCAACGAATCCTTCACCTCCAAAGTTAGACTCAAGTTTCATATGCAGTTCCACGACACTACAAATGTAGTGCGCTCTGACGGCCGCTACTCGTGCGCAGAGTGCGACGGCGCCACGTTCGCGACGGAGACGGAACTGTTCGACCACGTGCACTTCCAACACGACAAGCAGAAGCGGTGGCAGTGTCCGGTCGAGGGCTGCGGGAAGACCTTCTTCCTTAGGGCAACCCTAACAAAGCACAGTCGCACGCACACAGACACACGCCGCTACGTGTGCGCGACGTGCAACAAGCGGTTCTTAGATAAACAGACTTTAGATGAACATGGAGTGACACATCTACAGATCAAACCCTTCCAATGCCACATCTGCCTGAAGCAGCTAACCCGTCGCTCGCGACTGCGCATGCACGTGCGCGCGCACGAAGAGGAGTTAACTCCGCGACTCGTGCGCGTCTGTGCAGTCTGCACGAGGGCCTTCCGGGATCATAGAGATGCACAGGAGCATGCAACGAAATCCACGGAGTGTATCGAGGCTTTCGCGAACGAGTTGAAGGAAGAGGCGGAAGAGGTGACGGTACAGCTGTCGCCCACCAGCGGGATTGTCAGACACACTGTGCAGATAGTTGAATCTCCGAAGCTATCGAAGCCGATCAAACGGCAGGTGTCGGACGAAGTAGGCGAGCCGCTGCTGAGCCAACTAGCGGACGAAGCGAGAACTATCATACGAGTCGTCGAGATCGAGAAGGCGTTCCGATGCGAGTTTTGTGAGGATGTGTTCTACATGGAGAGCGGTCTGAACACTCACCGCGCGATACACAAGGGCGTCAAGAATCCCTTCACATGCCACATCTGTAAAGTGAGCTTCGCCACTTATTCCAGATGTACGACCCATAAAACCACTCACGGCTTCTACAAGCGTTCGCTAGCGGACGCTAAGAAGCAGGCCGCCGGAGCACCGCAGGCCGCCGAGGCCTCCGCCGGCCGCGCGGCCTCCGGCATACTGGGATACGGGGACTTTCCCGTGGTCAAGCACTTTCTGTGTGAGGACTGCGGGCGCTCGTACTTGCACTGGACGTACCTGCAGGTGCACAGGCGCATGAAGCACGCCAGCGAGAACTGCCTCTACAAGTGTAACCAGTGTGAACTTACCTTCCCCAACAGTTGGAGCCTGGCGTACCATCGTAAGAAGGTGCACGGTAGGACCGGACCGGACCACCCCGGCACCACCAAGATCACCAGGCCAGATTACAGAATACCGTGTCGAGATTGTAGCGAGGTGTTGCCAAATAAAACGGCTCTGTACAAGCATCGTAAGAAAGAACACAGCGATGGATTCACGCGAGCTAATAATAAACCAGGCATGTATGCCAGTGGCGAGTCGGCATCTACTGGCGGTGCGTGCCCCCGCTGTCCCGCCACGTTCACGCACGCGACCGATCTGCACAAACACGTCAAAGAGGTCCACGGCAATGACGCGTCATGCTTATCATGCAATAAGCCCGGTCCGCGACGTCCGCATACCTGCCCCGTGTGTGGACACACGTTCCGCACGCTCTCAATGCGGAATGAGCATCTGCGCGTGCACACGGGCGAGCGGCCCTTCCCTTGCGACGTGTGCGGAGTTGCCTTCAGGAGATCCACAGCCATGCGTAACCACCGTCTGATCCACACGGGGGTCCGCGCGTGGGCATGCGGCCGCTGTCCCAAGCGGTTCCGTATCCGCTCCGACCTGCGCACGCACCTGCGACTCAAGCACCCCGCCACCATCGTCGTTGTTGAGATGGAAGGTCTAAACCCTACCTCAGAAGAAGTGATGAAGATTCTTGCGCAACAAAACGTTCCACACGACAAGCTCATCGAAATCACCAAGATGTCCTTCCCAAAGGGCTCGGTGAGTGTGATCCCGTCGTGTGCGCGTGCGCTGTCGTCGCTGAGCACGGTGCCGCGCACACACGTCGCTTGCATCAAACCAACACCCACACTAATGCTGGACGAGTTCCAACCGGCTCGTCGCGGCCGCGGCATCGCTAAGAACCCGCGCCGCCCCAAGATACTGCAGCGAGGCGACGCGACACACAGCCCTGCCTACCCCATCGTTAGTGGACAGGAACTTTCGGACCTGAACGTGCAACTGCTACTGCGCGACGGTGTGCTGGTTAACGGCAACCCGATGGTTCAACTGCAGTTGAATGACCCCATGATGATGGAATAA
Protein Sequence: MSEAQPPLILCMENATGEDVALQIEPDDDFQMFLDKARSLLGFDVDLNSITRNQPVSLSENVYQFLINAEQNLQADELTQNFDQMLDTNDEANDLIYILDDGTQIRASQIHFDNDDPLIDLTAEKIPFLKYADVADDVDLDNIDIQETKKINIVGSPVSGKNSSPKCSFVNSLPFKLVCNNTSGFEAQFTKYLEANTAKTYATLKPVTARNKSPKSLIKDNFKNYDDNYQRSDNLSYTREEILNMFKDSPMTSLPYDQGYSERRHVRKTDPSRLVHKNWSKPISNVDIEVLIGDNESQICFVCGKHVDNSVDKLYLFDNEDQRLLHRCLPQKKMSTQLKIICEGCLNENFRPCRMKSANHFLNPDEFLVIRNNQQYIFQKVKNFSFTHLDKANEIINKVESNIDKEEFVKVEIGSDGEIITKPIDNDPRSDDIIIVKDEQKEGSSSDVEIIEPEPEIDNIIDNLEEADEEVKEFLGKYQCDNSEVKELKCRFCDKIFVDLPEVTEHCDTHKHVLEDGEVFPCPLCNYGYANLKWLKGHLKAAHEKTETTIALKEENEPVKEENKDDEQTPPKACSPIATRTRSCSKKGDSDKKEKEKPEDSKTNSNTETTEPPILKTEVKQECLDSSEDEIWIVQTADAEASQELQKLLCKVKVDGQDGDSEKTHKCFNCSQTFASADGLSNHRCRKRGRKRKSKDEVNLICIPTEEDFLKRPRKRRSREPTSNPQVLTCHNCNESFTSKVRLKFHMQFHDTTNVVRSDGRYSCAECDGATFATETELFDHVHFQHDKQKRWQCPVEGCGKTFFLRATLTKHSRTHTDTRRYVCATCNKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHVRAHEEELTPRLVRVCAVCTRAFRDHRDAQEHATKSTECIEAFANELKEEAEEVTVQLSPTSGIVRHTVQIVESPKLSKPIKRQVSDEVGEPLLSQLADEARTIIRVVEIEKAFRCEFCEDVFYMESGLNTHRAIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADAKKQAAGAPQAAEASAGRAASGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHASENCLYKCNQCELTFPNSWSLAYHRKKVHGRTGPDHPGTTKITRPDYRIPCRDCSEVLPNKTALYKHRKKEHSDGFTRANNKPGMYASGESASTGGACPRCPATFTHATDLHKHVKEVHGNDASCLSCNKPGPRRPHTCPVCGHTFRTLSMRNEHLRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHTGVRAWACGRCPKRFRIRSDLRTHLRLKHPATIVVVEMEGLNPTSEEVMKILAQQNVPHDKLIEITKMSFPKGSVSVIPSCARALSSLSTVPRTHVACIKPTPTLMLDEFQPARRGRGIAKNPRRPKILQRGDATHSPAYPIVSGQELSDLNVQLLLRDGVLVNGNPMVQLQLNDPMMME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00121732;
90% Identity: -
80% Identity: -