Tmat013321.1
Basic Information
- Insect
- Thalpophila matura
- Gene Symbol
- PAXBP1
- Assembly
- GCA_948465475.1
- Location
- OX419179.1:3773788-3801954[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 5.2e-05 0.59 10.0 0.0 6 40 523 557 518 569 0.89 2 5 0.002 23 4.8 0.0 16 40 604 628 594 640 0.87 3 5 0.002 23 4.8 0.0 16 40 675 699 665 711 0.87 4 5 0.002 23 4.8 0.0 16 40 746 770 736 782 0.87 5 5 1.8e-13 2e-09 37.8 0.2 17 190 818 972 812 981 0.68
Sequence Information
- Coding Sequence
- ATGTCATTGTTTCGAAAGCCGAAAAAGATTCAGCGTCGGATGTTTTGTGCTGATGATGACGAGGATGGGGAGCCAGAGGCGCCGCCGCCGCCAGTTATTAGCCACGAAAGAGAGAAGAAGGAAGCCAAGTCGACTAAGAACACTCCTCTGTTGAGTTTCGCCGACGAAGAAGAAGATGGAGAAATGTTCAAGGTTAAAAAGTCATCTCAAAGCAAGAGACTGGCCAAGAAGAGGGAGAAAGAGAAACAGAAGCGTGATGTGAGAACCGATGGTGATAATAACAAATATGACACTATCATACTGGAGGAAAAGAACAACTACACAGACGGCGTGAACGACAATCCGAAACCAAAGAAGAAGGTGACGTTAGAGGGGCTGATACTGTCCGGGCGGGAGGCGCTCGCGGCGGACGGGGCGGGGGACGTGTCCGACGACAGCGCGACCGCGGAGGACGACGGCGACGAGGACGACAGGGGGTTCCACCGGTACCGCGCGGAGTCCGTGAGGGCGGCGCTGTTGGGCGCGCCCGGCCGCATTCCCGACGCCGCGCTCATCCACGCCGCACGCAAGACCAGACAGCAGGCTCGCGAGTTGGGCGGGGACTACGTGCCGTTGAAGTCGGAGGCGGCGCCCGGCTCCCGGCTGGTGCGGGATGACGGCTCCGGCGACGATGAGGAGGAGGGAAGGATACACGTCAGGGGGTTGGACTTGCCCAGTGATAAGCCTAAACGTGGCACAGCGGCGGCTTCTGAGGAAGAGCTGGACAGCGAAGCCGAGGAGTGGGAGGAGCAGCAGTTGCAGAAGGCCAGGCCCGCGCTCGTGGATCTGACTGGTGAAGGCGTCATAGATGTGAACCCGTTCTCGGTGGCGCTGCCGGCGGCGCAGGCGGCGGCGCCCGAGCACCTCCGACCGCTCACGACCGCCGACACCCAGCAGCCGACGTGCGCCAACGAACTGGTGGACGCGCTTAAGAAACGGCTAGAAGAGCTCCGAGTAGAACGCGACGTGACGTCACATACGCAGACAGAACTACGCGACAGGTTGCTCACTTCAGCCCGAGTACGCGAGAGTCGGGCGTCCCGCTGCGGAGAATTAGACGCTGCGTACCGCAGGGCGCAGGCCATACGCGGCTTCCTCACCGATCTGATTGAGTGCCTCGATGAGAAGATGCCTCAGCTGGAGGCGCTAGAAGCGCGCGCGCTGGCGCTGCACAGGCGTCGCTGTGAGTTCCTGGTGGAGCGGCGGCGGGCGGACCTGCGCGACCAGGCGCAGGACGTGCTCGCGCCGCCCGGTCGAGCGGCATCATTGAAGCCCGCAGAGAGCGAAGAGAAGACGCGTCGCGCGGCCGAGCGGGAAGGTCGGCGGCGCGCGCGCAGGCTGCGGCGCGAGGCTGCAGCGGCTGCAGCCGGCGCCGCGCTGCCGCACCGCGACGGCGACTCCTCCGACGACGACCTGCCGCCCGACGAGCTGCACCACTACACGCAGGAGAGAGACGCGATCCGGCAGCAGTCGGCGTGCCTGTTCGGCGACGCGCTGCCGGCGTGGCGCAGCGTGCGCGGCGTGTGCGGCCGCCTGGCGCGCTGGCGGGCCCGCGCGCCGCGCCTCTACACCGACGCCTACGTCGCCGACTGCCTGCCCAAGCTACTGGCGCCCTACGTGAGGCACGAGTGGCGCAGTGAGCCCGCCCCGCCTCTACACCGACGCCTACGTCGCCGACTGCCTGCCCAAGCTACTGGCGCCCTACGTGAGGCACGAGGTGAGCACTACAGTCAGCAGTCAGCGTCCCTGTTCAGTGGCGCAGTGAGCCCGCCCCGCCTCTACACCGACGCCTACGTCGCCGACTGCCTGCCCAAGCTACTGGCGCCCTACGTGAGGCACGAGTGGCGCAGTGAGCCCGCCCCGCCTCTACACCGACGCCTACGTCGCCGACTGCCTGCCCAAGCTACTGGCGCCCTACGTGAGGCACGAGGTGAGCACTACAGTCAGCAGTCAGCGTCCCTGTTCAGTGGCGCAGTGAGCCCGCCCCGCCTCTACACCGACGCCTACGTCGCCGACTGCCTGCCCAAGCTACTGGCGCCCTACGTGAGGCACGAGTGGCGCAGTGAGCCCGCCCCGCCTCTACACCGACGCCTACGTCGCCGACTGCCTGCCCAAGCTACTGGCGCCCTACGTGAGGCACGAGGTGAGCACTACAGTCAGCAGTCAGCGTCCCTGTTCAGTGGCGCAGTGAGCCCGCCCCGCCTCTACACCGACGCCTACGTCGCCGACTGCCTGCCCAAGCTACTGGCGCCCTACGTGAGGCACGAGTGGCGCAGTGAGCCCGCCCCGCCTCTACACCGACGCCTACGTCGCCGACTGCCTGCCCAAGCTACTGGCGCCCTACGTGAGGCACGAGGTGAGCACTACAGTCAGCAGTCAGCGTCCCTGTTCAGTGGCGCAGTGAGCCCGCCCCGCCTCTACACCGACGCCTACGTCGCCGACTGCCTGCCCAAGCTACTGGCGCCCTACGTGAGGCACGAGTTAATACTATGGAACCCGCTGGCAGATGAAGACAACGAGGACTACGAGAGAATGGATTGGTACAAATGCCTGATGATGTACGGAGTGCGTTCAGAGCGGGCGGCGGACGACTCGTCGGAGTCGGGGTCGGACGGGGAGCGGCCGGAGCTCGCCGCCGTGACCCCGGCCTCCGTGCGCGACGACCCTGACTTGCTGCTCGTACCCACCGTCGTCAGCAGGGTCGTGCTGCCCAAGCTCACAGAGCTGGTGACATGCGCGTGGGACCCGGTGGTGGTGCGTGCGTGCGTGCGGCTGCGCTCGCTCGTCGTCCGAGCGGCCGCGCTGCCGCACGCCGCGCCCGCCCTGCGCCGCCTGGCCGCCGCGCTGCGCACGCGCCTCGCCGCCGCACTCGCCGCCGACGTCTTTCTGCCTGCGTTGCCGCCACAAGTGCTGGAGGGCGCGGGCGGCGCGTTCTGGCGTCGCTGCCTCGGCGCAGGGGTGCGCCTGCTGCGGGCCGCACTGGCGCTGTGCGGCCCGCCCGCGCTGCTGCGGGCCGACCCGCTCGTACTGTCGCTCATCGAGACGCTGTGTTGCGGCGCGGGCGCGGCGGGCGGGCCGCACGCGGCGGGCGCGGCGGGCGCGCTGGCGGCCACGCTGCCGCGCGCCGGCCCGCTGCGCGCACGCGCACTGGCGCGCCTCGCCGCGCTCGCCGCGCTCGCGCTGTCCCGGCTCGACAGCGACAACCCGCTGCATCTGAAAGCCTTGGAACAGGCAAGAGCAGTGATCGCAGAGGCGCGAGCAGTTGAATGA
- Protein Sequence
- MSLFRKPKKIQRRMFCADDDEDGEPEAPPPPVISHEREKKEAKSTKNTPLLSFADEEEDGEMFKVKKSSQSKRLAKKREKEKQKRDVRTDGDNNKYDTIILEEKNNYTDGVNDNPKPKKKVTLEGLILSGREALAADGAGDVSDDSATAEDDGDEDDRGFHRYRAESVRAALLGAPGRIPDAALIHAARKTRQQARELGGDYVPLKSEAAPGSRLVRDDGSGDDEEEGRIHVRGLDLPSDKPKRGTAAASEEELDSEAEEWEEQQLQKARPALVDLTGEGVIDVNPFSVALPAAQAAAPEHLRPLTTADTQQPTCANELVDALKKRLEELRVERDVTSHTQTELRDRLLTSARVRESRASRCGELDAAYRRAQAIRGFLTDLIECLDEKMPQLEALEARALALHRRRCEFLVERRRADLRDQAQDVLAPPGRAASLKPAESEEKTRRAAEREGRRRARRLRREAAAAAAGAALPHRDGDSSDDDLPPDELHHYTQERDAIRQQSACLFGDALPAWRSVRGVCGRLARWRARAPRLYTDAYVADCLPKLLAPYVRHEWRSEPAPPLHRRLRRRLPAQATGALREARGEHYSQQSASLFSGAVSPPRLYTDAYVADCLPKLLAPYVRHEWRSEPAPPLHRRLRRRLPAQATGALREARGEHYSQQSASLFSGAVSPPRLYTDAYVADCLPKLLAPYVRHEWRSEPAPPLHRRLRRRLPAQATGALREARGEHYSQQSASLFSGAVSPPRLYTDAYVADCLPKLLAPYVRHEWRSEPAPPLHRRLRRRLPAQATGALREARGEHYSQQSASLFSGAVSPPRLYTDAYVADCLPKLLAPYVRHELILWNPLADEDNEDYERMDWYKCLMMYGVRSERAADDSSESGSDGERPELAAVTPASVRDDPDLLLVPTVVSRVVLPKLTELVTCAWDPVVVRACVRLRSLVVRAAALPHAAPALRRLAAALRTRLAAALAADVFLPALPPQVLEGAGGAFWRRCLGAGVRLLRAALALCGPPALLRADPLVLSLIETLCCGAGAAGGPHAAGAAGALAATLPRAGPLRARALARLAALAALALSRLDSDNPLHLKALEQARAVIAEARAVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -