Tmat011886.1
Basic Information
- Insect
- Thalpophila matura
- Gene Symbol
- -
- Assembly
- GCA_948465475.1
- Location
- OX419194.1:4614647-4662511[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-11 3.7e-07 30.1 0.0 4 81 28 107 26 124 0.86 2 2 1.3e-05 0.3 10.6 0.4 344 381 246 283 191 304 0.81
Sequence Information
- Coding Sequence
- ATGTGGTACGACAAGTGGGACCGGGACAGGGGCGGGGGGAGCGGCGGCGGGGGCGGCGGGTCCGGCGCGTGGGCCGGCCGCGACCGCGAGCGCGACCGCGAGCGCGAGCGGCAGGCGCGCGCGCACCAGATGTCGCAGGCGCACGCCGCCGAGCCCGACGCATCGTCACTCTTCCCGGCGCCGTTCAGGGTGACAGGCAACAGGGATCGCGTGAGTCAGCAGATTCAGACCAAGCTTGGCGACTACCACCTCGCGCAGTGGTTCATCGATGACCCCAGCAAATCCATCGGGATCTGCGCTGAACCACCCAGTCCTGCACCATTGCATACATCAGCCTTTTATGATTCCACTTTCAAAGTAACAGCTCCTATTACAGTCTACTGCTTCTTCCTACCTTCTTACTACCTTCAGCAAATGATTAGAAGACTTCTAAGCCATAATAATGTTCAGATGAAGATGTATGAGCGCCTCACGATGAAAACACTCATTTGCGACGTCACGCCCGACGGTTTTGGGAGTGTTAAATACGTGTTCTGTTTTCTAAAAGGACAAGGCCCACCATCGCGGCGAGAGAGCGAGTTCAAGAAGCCGGCACACGCCCCTCAGAACGGCGTGCGCCATCACCGCCCCCATATCCCACACAACAAGAGCGACGGTTCCGGTTCAACGGGAGCCCCGCACAGACCGCCTCCGATCAAGATACCCAACGGTATCCAGTCACAGAATGCTATCGATAGCAGTCAACCGCCAATAGAAAGTATTTTAAAGGAGATGAAGTCTCTACCGACGCCGTTGTCAGTGATAGCTGCGACGCCGAGGAAGGAATTGGAGAACAAATTCATCTTCAACCCTTTTACAAATAAGGTCCAAGAAAACCCTCAGTTGGCCGCCAACGATCTCAAAACACCCCTACCTAAGCCCGGTAAGTGTGAATAG
- Protein Sequence
- MWYDKWDRDRGGGSGGGGGGSGAWAGRDRERDRERERQARAHQMSQAHAAEPDASSLFPAPFRVTGNRDRVSQQIQTKLGDYHLAQWFIDDPSKSIGICAEPPSPAPLHTSAFYDSTFKVTAPITVYCFFLPSYYLQQMIRRLLSHNNVQMKMYERLTMKTLICDVTPDGFGSVKYVFCFLKGQGPPSRRESEFKKPAHAPQNGVRHHRPHIPHNKSDGSGSTGAPHRPPPIKIPNGIQSQNAIDSSQPPIESILKEMKSLPTPLSVIAATPRKELENKFIFNPFTNKVQENPQLAANDLKTPLPKPGKCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -