Tmat001003.1
Basic Information
- Insect
- Thalpophila matura
- Gene Symbol
- SMARCC2
- Assembly
- GCA_948465475.1
- Location
- OX419197.1:7837218-7848739[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.1e-15 7.7e-12 45.5 0.1 4 44 517 557 514 559 0.95
Sequence Information
- Coding Sequence
- ATGAAAGCGTTCATGGACATGAAGCCGGGCGGGTCCCTGTGCACGGTGCTCGCCACCATGTTCCGCTTCAAGTCGGAGCAGCGGTGGCGCAAGTTCGACTTCCAGGTCGGTAAGAACCCGTCCCGCAAGGACCTGAACGTGCAGATGATGATGGAGATCGAGTCGTCGCTGCTCGGCGCCGAAGTCATCCGGTCGCCGTGCGTCTTCATACGCGCGGACGTCGACAAGGCGACCGCCAACAAAGTGAAGGATATCGTGGTCAACCATCAGGGGGAGATTTGCGAAGACGAAGAGGACGCGACGCACATCGTGTACCCGACGGTGGACCCTTTGGAGGAGGAGTACGCGCGGCCGGTGTTCCGCCGCGGCAGCCACGCGCTGGTGCACTGGTACTACCTGCCCGACAGCCACGACACCTGGGCGCAGACCGAGCTGCCCGTGGACGTGCCGGAGACAGTGAGTTGGGACTGCAACCGGTCGGAGCCGTGGCGCGTGTCGGCGTCGTGGGCGCTCGACCTGCCGCAGTACAACGAGTGGATGAACGAGGAGGACTACGAGGTCGACGCGAACGGCAAGAAAAAGGTTCACAAACTGCGGCTATCAGTGGACGATCTGATCCCGGGCGGGGAGCCATCGAGCAAGTCTAAAAAAGGCAGCAAGAGGAAGCGTTCGCCTTCGCCACCGCCGCAGAAACATGGCAAGAGAAAGAGTCGTACAACCAAGCGGCGAGAAAACGACGTGGATGAAGAAGAAGACAACGCATCCAGAGACAACACTGATGCTGCACCCACGCCAGAGAACGAACGATCTGCTGACACGGCCGCAAGCGGGTCGGCGGCAGCGAGCGAGGCGCCCGTGGGCGACGCGCCCGCCACGCCCGCGCCGCCGCTCGACGCGCACGACGACTCGCAGGGCAAGCACAGCGACTCCAACACGCAGGAAATGCTAACGAAAGAGGAGTTAGAAGACAACGTGACGGACCAGACGCATCACATCGTGGTGCCGTCATACTCGGCGTGGTTCGACTACAACTCCATACACACCATAGAGAAGCGCGCGCTGCCAGAATTTTTCAACGGGAAGAACAAGTCTAAGACGCCGGAGATATATCTCGCTTACAGGAACTTCATGATCGACACGTACCGCCTGAACCCCACGGAGTACCTGACGAGCACCGCGTGCCGGCGCAACCTGGCGGGCGACGTGTGCGCCATCATGCGCGTGCACGGCTTCCTCGAGCAGTGGGGCCTCATCAACTATCAGCTGGAGGCGGAGTCCCGTCCGACCGCGATGGGTCCGCCGCCCACGTCGCACTTCCACGTGCTGTCCGACACGCCGTCCGGCCTGCAGCCGCTCGTCACCCGGCCCACGCAGCCACGTCCGGCTGAGAACGTACCAAAAGTGGAGCCGGGTCTACCGAACGGTGCCGAGGCTGGTGCGGGGGCCACGCCACCTGTACCACCGATCAAGCCCGAGCCTTCGCTGGACCTCGCGGCTGCGTCTGGGTTGAAGCTCGACCAGTACCGCGGCGGCGTGCGCGGGCGCGGCTGGACGGAGCAGGAGACGCTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTGGCCGCGCACGTGGGCACGCGCACGCAGGACGAGTGCATCCTGCACTTCCTGCGCCTGCCCATCGAGGAGCCCTACCTGCACGACGCGCAAGCCGGTGGCGTGCTAGGACCACTTGCCTACCAGCCGATTCCGTTCAGCAAGACGGGCAACCCCGTCATGAGCACCGTCGCGTTCCTAGCGTCCGTGGTGGACCCGCGCATCGCGTCGAAGGCCACAAGGGCAGCTATGGAGGAGTTCTCCGCTATTAAGGACGAGGTGCCGGCCGCCATGATGGAGGCGCACGTGAAGGCGGCGGGCGCGCACGGGCCGGCCGCCGCGCTCGCCGCCACCGGCATCGCCGGCACCGCGCCGGACCTCTCGCCCACAGGTAACTATACTATATCATGA
- Protein Sequence
- MKAFMDMKPGGSLCTVLATMFRFKSEQRWRKFDFQVGKNPSRKDLNVQMMMEIESSLLGAEVIRSPCVFIRADVDKATANKVKDIVVNHQGEICEDEEDATHIVYPTVDPLEEEYARPVFRRGSHALVHWYYLPDSHDTWAQTELPVDVPETVSWDCNRSEPWRVSASWALDLPQYNEWMNEEDYEVDANGKKKVHKLRLSVDDLIPGGEPSSKSKKGSKRKRSPSPPPQKHGKRKSRTTKRRENDVDEEEDNASRDNTDAAPTPENERSADTAASGSAAASEAPVGDAPATPAPPLDAHDDSQGKHSDSNTQEMLTKEELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHGFLEQWGLINYQLEAESRPTAMGPPPTSHFHVLSDTPSGLQPLVTRPTQPRPAENVPKVEPGLPNGAEAGAGATPPVPPIKPEPSLDLAAASGLKLDQYRGGVRGRGWTEQETLLLLEALELHRDDWNRVAAHVGTRTQDECILHFLRLPIEEPYLHDAQAGGVLGPLAYQPIPFSKTGNPVMSTVAFLASVVDPRIASKATRAAMEEFSAIKDEVPAAMMEAHVKAAGAHGPAAALAATGIAGTAPDLSPTGNYTIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00000289; iTF_00689350; iTF_00363978; iTF_01362396;
- 90% Identity
- -
- 80% Identity
- -